RNA–Protein interactions for RNA: ENST00000620424.1

SYNRG-228, Transcript of synergin gamma, humanhuman

TSL 3

Gene SYNRG, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-228ENST00000620424 RBM22Q9NW64 420 aaKnown RBP eCLIP9.54□□□□□ -0.88
SYNRG-228ENST00000620424 DDX56Q9NY93 547 aaKnown RBP9.54□□□□□ -0.88
SYNRG-228ENST00000620424 ATP8A1Q9Y2Q0 1164 aa9.54□□□□□ -0.88
SYNRG-228ENST00000620424 CNOT1A5YKK6 2376 aaKnown RBP9.54□□□□□ -0.88
SYNRG-228ENST00000620424 TRPM6Q9BX84 2022 aa9.54□□□□□ -0.88
SYNRG-228ENST00000620424 NCOR2Q9Y618 2525 aa9.54□□□□□ -0.88
SYNRG-228ENST00000620424 ANKRD36A6QL64 1941 aa9.54□□□□□ -0.88
SYNRG-228ENST00000620424 hCG_1818297A0A087WSY0 165 aa9.53□□□□□ -0.88
SYNRG-228ENST00000620424 MACROD2A1Z1Q3 448 aa9.53□□□□□ -0.88
SYNRG-228ENST00000620424 ZNF487B1APH4 448 aa9.53□□□□□ -0.88
SYNRG-228ENST00000620424 PJA2O43164 708 aa9.53□□□□□ -0.88
SYNRG-228ENST00000620424 HTRA2O43464 458 aaPredicted RBP9.53□□□□□ -0.88
SYNRG-228ENST00000620424 JCHAINP01591 159 aa9.53□□□□□ -0.88
SYNRG-228ENST00000620424 PDHA1P08559 390 aa9.53□□□□□ -0.88
SYNRG-228ENST00000620424 ZNF883P0CG24 379 aa9.53□□□□□ -0.88
SYNRG-228ENST00000620424 C6P13671 934 aa9.53□□□□□ -0.88
SYNRG-228ENST00000620424 CEACAM1P13688 526 aa9.53□□□□□ -0.88
SYNRG-228ENST00000620424 CCNB1P14635 433 aa9.53□□□□□ -0.88
SYNRG-228ENST00000620424 CTPS1P17812 591 aa9.53□□□□□ -0.88
SYNRG-228ENST00000620424 CCNCP24863 283 aa9.53□□□□□ -0.88
SYNRG-228ENST00000620424 EPHA8P29322 1005 aaPredicted RBP9.53□□□□□ -0.88
SYNRG-228ENST00000620424 NUDT1P36639 197 aa9.53□□□□□ -0.88
SYNRG-228ENST00000620424 LIG3P49916 1009 aa9.53□□□□□ -0.88
SYNRG-228ENST00000620424 CCT8P50990 548 aa9.53□□□□□ -0.88
SYNRG-228ENST00000620424 NAP1L1P55209 391 aaKnown RBP9.53□□□□□ -0.88
SYNRG-228ENST00000620424 SIM1P81133 766 aaPredicted RBP9.53□□□□□ -0.88
SYNRG-228ENST00000620424 PPIDQ08752 370 aaKnown RBP9.53□□□□□ -0.88
SYNRG-228ENST00000620424 ITKQ08881 620 aa9.53□□□□□ -0.88
SYNRG-228ENST00000620424 SGCGQ13326 291 aa9.53□□□□□ -0.88
SYNRG-228ENST00000620424 HNRNPDQ14103 355 aaKnown RBP9.53□□□□□ -0.88
SYNRG-228ENST00000620424 FZD2Q14332 565 aa9.53□□□□□ -0.88
SYNRG-228ENST00000620424 GRM3Q14832 879 aa9.53□□□□□ -0.88
SYNRG-228ENST00000620424 IRF4Q15306 451 aa9.53□□□□□ -0.88
SYNRG-228ENST00000620424 IFI16Q16666 785 aaKnown RBP9.53□□□□□ -0.88
SYNRG-228ENST00000620424 SLC45A4Q5BKX6 768 aa9.53□□□□□ -0.88
SYNRG-228ENST00000620424 CFAP58Q5T655 872 aa9.53□□□□□ -0.88
SYNRG-228ENST00000620424 KCTD16Q68DU8 428 aa9.53□□□□□ -0.88
SYNRG-228ENST00000620424 BRAT1Q6PJG6 821 aa9.53□□□□□ -0.88
SYNRG-228ENST00000620424 DBX2Q6ZNG2 339 aa9.53□□□□□ -0.88
SYNRG-228ENST00000620424 KANSL1Q7Z3B3 1105 aa9.53□□□□□ -0.88
SYNRG-228ENST00000620424 LRRC49Q8IUZ0 686 aa9.53□□□□□ -0.88
SYNRG-228ENST00000620424 CCDC13Q8IYE1 715 aa9.53□□□□□ -0.88
SYNRG-228ENST00000620424 PELI3Q8N2H9 469 aa9.53□□□□□ -0.88
SYNRG-228ENST00000620424 CNTD1Q8N815 330 aa9.53□□□□□ -0.88
SYNRG-228ENST00000620424 TP53I13Q8NBR0 393 aaPredicted RBP9.53□□□□□ -0.88
SYNRG-228ENST00000620424 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.53□□□□□ -0.88
SYNRG-228ENST00000620424 CXorf40AQ8TE69 158 aa9.53□□□□□ -0.88
SYNRG-228ENST00000620424 SETD7Q8WTS6 366 aaKnown RBP9.53□□□□□ -0.88
SYNRG-228ENST00000620424 PDCD6IPQ8WUM4 868 aaKnown RBP9.53□□□□□ -0.88
SYNRG-228ENST00000620424 NSMCE1Q8WV22 266 aa9.53□□□□□ -0.88
SYNRG-228ENST00000620424 ALG3Q92685 438 aa9.53□□□□□ -0.88
SYNRG-228ENST00000620424 HDAC11Q96DB2 347 aa9.53□□□□□ -0.88
SYNRG-228ENST00000620424 KLHDC7BQ96G42 594 aa9.53□□□□□ -0.88
SYNRG-228ENST00000620424 HEMGNQ9BXL5 484 aa9.53□□□□□ -0.88
SYNRG-228ENST00000620424 MFRPQ9BY79 579 aa9.53□□□□□ -0.88
SYNRG-228ENST00000620424 BRD8Q9H0E9 1235 aa9.53□□□□□ -0.88
SYNRG-228ENST00000620424 C10orf88Q9H8K7 445 aa9.53□□□□□ -0.88
SYNRG-228ENST00000620424 GPR27Q9NS67 375 aa9.53□□□□□ -0.88
SYNRG-228ENST00000620424 UCKL1Q9NWZ5 548 aa9.53□□□□□ -0.88
SYNRG-228ENST00000620424 B4GALT6Q9UBX8 382 aa9.53□□□□□ -0.88
SYNRG-228ENST00000620424 KLF15Q9UIH9 416 aa9.53□□□□□ -0.88
SYNRG-228ENST00000620424 PCOLCE2Q9UKZ9 415 aa9.53□□□□□ -0.88
SYNRG-228ENST00000620424 PNMA8BQ9ULN7 279 aaPredicted RBP9.53□□□□□ -0.88
SYNRG-228ENST00000620424 TPX2Q9ULW0 747 aaKnown RBP9.53□□□□□ -0.88
SYNRG-228ENST00000620424 PACSIN2Q9UNF0 486 aaPredicted RBP9.53□□□□□ -0.88
SYNRG-228ENST00000620424 TTLL3Q9Y4R7 772 aa9.53□□□□□ -0.88
SYNRG-228ENST00000620424 PCDHB9Q9Y5E1 797 aa9.53□□□□□ -0.88
SYNRG-228ENST00000620424 LRRK1Q38SD2 2015 aa9.53□□□□□ -0.88
SYNRG-228ENST00000620424 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.52□□□□□ -0.89
SYNRG-228ENST00000620424 A6NNZ2 444 aa9.52□□□□□ -0.89
SYNRG-228ENST00000620424 BTNL10A8MVZ5 291 aa9.52□□□□□ -0.89
SYNRG-228ENST00000620424 CST8O60676 142 aa9.52□□□□□ -0.89
SYNRG-228ENST00000620424 TM7SF2O76062 418 aa9.52□□□□□ -0.89
SYNRG-228ENST00000620424 PGLSO95336 258 aa9.52□□□□□ -0.89
SYNRG-228ENST00000620424 IPO7O95373 1038 aaKnown RBP9.52□□□□□ -0.89
SYNRG-228ENST00000620424 FTCDO95954 541 aa9.52□□□□□ -0.89
SYNRG-228ENST00000620424 CPP00450 1065 aa9.52□□□□□ -0.89
SYNRG-228ENST00000620424 PRLP01236 227 aa9.52□□□□□ -0.89
SYNRG-228ENST00000620424 MMP2P08253 660 aa9.52□□□□□ -0.89
SYNRG-228ENST00000620424 ADRB1P08588 477 aa9.52□□□□□ -0.89
SYNRG-228ENST00000620424 ALPIP09923 528 aa9.52□□□□□ -0.89
SYNRG-228ENST00000620424 SPINK2P20155 84 aa9.52□□□□□ -0.89
SYNRG-228ENST00000620424 MX2P20592 715 aa9.52□□□□□ -0.89
SYNRG-228ENST00000620424 LHCGRP22888 699 aa9.52□□□□□ -0.89
SYNRG-228ENST00000620424 CTNNA1P35221 906 aaKnown RBP9.52□□□□□ -0.89
SYNRG-228ENST00000620424 HSPA9P38646 679 aaKnown RBP9.52□□□□□ -0.89
SYNRG-228ENST00000620424 PFN3P60673 137 aa9.52□□□□□ -0.89
SYNRG-228ENST00000620424 IFI35P80217 286 aaPredicted RBP9.52□□□□□ -0.89
SYNRG-228ENST00000620424 ELP6Q0PNE2 266 aa9.52□□□□□ -0.89
SYNRG-228ENST00000620424 AP1B1Q10567 949 aa9.52□□□□□ -0.89
SYNRG-228ENST00000620424 SLC14A1Q13336 389 aa9.52□□□□□ -0.89
SYNRG-228ENST00000620424 CNGA3Q16281 694 aa9.52□□□□□ -0.89
SYNRG-228ENST00000620424 WSCD2Q2TBF2 565 aa9.52□□□□□ -0.89
SYNRG-228ENST00000620424 ALG1LQ6GMV1 187 aa9.52□□□□□ -0.89
SYNRG-228ENST00000620424 LIPIQ6XZB0 460 aa9.52□□□□□ -0.89
SYNRG-228ENST00000620424 KYAT3Q6YP21 454 aaKnown RBP9.52□□□□□ -0.89
SYNRG-228ENST00000620424 RFLNAQ6ZTI6 216 aa9.52□□□□□ -0.89
SYNRG-228ENST00000620424 DPPA4Q7L190 304 aa9.52□□□□□ -0.89
SYNRG-228ENST00000620424 TSPAN33Q86UF1 283 aa9.52□□□□□ -0.89
SYNRG-228ENST00000620424 SLCO6A1Q86UG4 719 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms