RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 MGAT1P26572 445 aa8.08□□□□□ -1.12
CPNE3-209ENST00000620393 ELK3P41970 407 aa8.08□□□□□ -1.12
CPNE3-209ENST00000620393 WASP42768 502 aa8.08□□□□□ -1.12
CPNE3-209ENST00000620393 CHRNA4P43681 627 aa8.08□□□□□ -1.12
CPNE3-209ENST00000620393 PMS2P54278 862 aa8.08□□□□□ -1.12
CPNE3-209ENST00000620393 POLR2LP62875 67 aaKnown RBP8.08□□□□□ -1.12
CPNE3-209ENST00000620393 CAMK2GQ13555 558 aaPredicted RBP8.08□□□□□ -1.12
CPNE3-209ENST00000620393 ELAVL3Q14576 367 aaKnown RBP8.08□□□□□ -1.12
CPNE3-209ENST00000620393 QPCTQ16769 361 aa8.08□□□□□ -1.12
CPNE3-209ENST00000620393 PCID2Q5JVF3 399 aa8.08□□□□□ -1.12
CPNE3-209ENST00000620393 CERCAMQ5T4B2 595 aa8.08□□□□□ -1.12
CPNE3-209ENST00000620393 ARMC3Q5W041 872 aa8.08□□□□□ -1.12
CPNE3-209ENST00000620393 FBXO38Q6PIJ6 1188 aa8.08□□□□□ -1.12
CPNE3-209ENST00000620393 TRMT10CQ7L0Y3 403 aaKnown RBP8.08□□□□□ -1.12
CPNE3-209ENST00000620393 TMC3Q7Z5M5 1100 aa8.08□□□□□ -1.12
CPNE3-209ENST00000620393 CCDC25Q86WR0 208 aa8.08□□□□□ -1.12
CPNE3-209ENST00000620393 CCNJLQ8IV13 435 aa8.08□□□□□ -1.12
CPNE3-209ENST00000620393 IGDCC3Q8IVU1 814 aa8.08□□□□□ -1.12
CPNE3-209ENST00000620393 AGGF1Q8N302 714 aaeCLIP8.08□□□□□ -1.12
CPNE3-209ENST00000620393 SYNPOQ8N3V7 929 aa8.08□□□□□ -1.12
CPNE3-209ENST00000620393 IL17RCQ8NAC3 791 aa8.08□□□□□ -1.12
CPNE3-209ENST00000620393 BRSK1Q8TDC3 778 aa8.08□□□□□ -1.12
CPNE3-209ENST00000620393 PYROXD1Q8WU10 500 aa8.08□□□□□ -1.12
CPNE3-209ENST00000620393 PDCD6IPQ8WUM4 868 aaKnown RBP8.08□□□□□ -1.12
CPNE3-209ENST00000620393 OR8D1Q8WZ84 308 aa8.08□□□□□ -1.12
CPNE3-209ENST00000620393 RMDN1Q96DB5 314 aa8.08□□□□□ -1.12
CPNE3-209ENST00000620393 ECHDC3Q96DC8 303 aa8.08□□□□□ -1.12
CPNE3-209ENST00000620393 KLHL32Q96NJ5 620 aa8.08□□□□□ -1.12
CPNE3-209ENST00000620393 SRPK1Q96SB4 655 aaKnown RBP8.08□□□□□ -1.12
CPNE3-209ENST00000620393 EBNA1BP2Q99848 306 aaKnown RBP8.08□□□□□ -1.12
CPNE3-209ENST00000620393 GABRG3Q99928 467 aa8.08□□□□□ -1.12
CPNE3-209ENST00000620393 NAT9Q9BTE0 207 aa8.08□□□□□ -1.12
CPNE3-209ENST00000620393 IL22Q9GZX6 179 aa8.08□□□□□ -1.12
CPNE3-209ENST00000620393 SEMA4AQ9H3S1 761 aa8.08□□□□□ -1.12
CPNE3-209ENST00000620393 ZDHHC6Q9H6R6 413 aa8.08□□□□□ -1.12
CPNE3-209ENST00000620393 LMAN1LQ9HAT1 526 aa8.08□□□□□ -1.12
CPNE3-209ENST00000620393 ARFGAP3Q9NP61 516 aa8.08□□□□□ -1.12
CPNE3-209ENST00000620393 SAYSD1Q9NPB0 183 aa8.08□□□□□ -1.12
CPNE3-209ENST00000620393 CD320Q9NPF0 282 aa8.08□□□□□ -1.12
CPNE3-209ENST00000620393 ZDHHC4Q9NPG8 344 aa8.08□□□□□ -1.12
CPNE3-209ENST00000620393 PIH1D1Q9NWS0 290 aaKnown RBP8.08□□□□□ -1.12
CPNE3-209ENST00000620393 DKK3Q9UBP4 350 aa8.08□□□□□ -1.12
CPNE3-209ENST00000620393 TSR3Q9UJK0 312 aaKnown RBP8.08□□□□□ -1.12
CPNE3-209ENST00000620393 FBXL21Q9UKT6 434 aa8.08□□□□□ -1.12
CPNE3-209ENST00000620393 PHTF1Q9UMS5 762 aa8.08□□□□□ -1.12
CPNE3-209ENST00000620393 NDRG2Q9UN36 371 aaKnown RBP8.08□□□□□ -1.12
CPNE3-209ENST00000620393 PPIL1Q9Y3C6 166 aa8.08□□□□□ -1.12
CPNE3-209ENST00000620393 TEX264Q9Y6I9 313 aa8.08□□□□□ -1.12
CPNE3-209ENST00000620393 EYSQ5T1H1 3165 aa8.08□□□□□ -1.12
CPNE3-209ENST00000620393 F5P12259 2224 aa8.07□□□□□ -1.12
CPNE3-209ENST00000620393 KANSL1LA0AUZ9 987 aa8.07□□□□□ -1.12
CPNE3-209ENST00000620393 TSPAN11A1L157 253 aa8.07□□□□□ -1.12
CPNE3-209ENST00000620393 FAM170BA6NMN3 283 aa8.07□□□□□ -1.12
CPNE3-209ENST00000620393 RNF40O75150 1001 aa8.07□□□□□ -1.12
CPNE3-209ENST00000620393 BANF1O75531 89 aa8.07□□□□□ -1.12
CPNE3-209ENST00000620393 KLF8O95600 359 aaPredicted RBP8.07□□□□□ -1.12
CPNE3-209ENST00000620393 TTC4O95801 387 aa8.07□□□□□ -1.12
CPNE3-209ENST00000620393 UGT2B4P06133 528 aa8.07□□□□□ -1.12
CPNE3-209ENST00000620393 TIMP2P16035 220 aa8.07□□□□□ -1.12
CPNE3-209ENST00000620393 TSHRP16473 764 aa8.07□□□□□ -1.12
CPNE3-209ENST00000620393 ADRA1DP25100 572 aa8.07□□□□□ -1.12
CPNE3-209ENST00000620393 SLC8A1P32418 973 aa8.07□□□□□ -1.12
CPNE3-209ENST00000620393 GRIA4P48058 902 aa8.07□□□□□ -1.12
CPNE3-209ENST00000620393 EPHB1P54762 984 aa8.07□□□□□ -1.12
CPNE3-209ENST00000620393 FZD5Q13467 585 aa8.07□□□□□ -1.12
CPNE3-209ENST00000620393 MTM1Q13496 603 aa8.07□□□□□ -1.12
CPNE3-209ENST00000620393 LAMB3Q13751 1172 aa8.07□□□□□ -1.12
CPNE3-209ENST00000620393 GALNT3Q14435 633 aa8.07□□□□□ -1.12
CPNE3-209ENST00000620393 STARD3Q14849 445 aa8.07□□□□□ -1.12
CPNE3-209ENST00000620393 KYNUQ16719 465 aa8.07□□□□□ -1.12
CPNE3-209ENST00000620393 CCDC38Q502W7 563 aa8.07□□□□□ -1.12
CPNE3-209ENST00000620393 ZNF805Q5CZA5 627 aa8.07□□□□□ -1.12
CPNE3-209ENST00000620393 SPDYCQ5MJ68 293 aa8.07□□□□□ -1.12
CPNE3-209ENST00000620393 EOGTQ5NDL2 527 aa8.07□□□□□ -1.12
CPNE3-209ENST00000620393 HP1BP3Q5SSJ5 553 aaPredicted RBP8.07□□□□□ -1.12
CPNE3-209ENST00000620393 FAM46CQ5VWP2 391 aa8.07□□□□□ -1.12
CPNE3-209ENST00000620393 DENND2CQ68D51 928 aa8.07□□□□□ -1.12
CPNE3-209ENST00000620393 PKN3Q6P5Z2 889 aa8.07□□□□□ -1.12
CPNE3-209ENST00000620393 BRAT1Q6PJG6 821 aa8.07□□□□□ -1.12
CPNE3-209ENST00000620393 DSG4Q86SJ6 1040 aa8.07□□□□□ -1.12
CPNE3-209ENST00000620393 ANKMY2Q8IV38 441 aa8.07□□□□□ -1.12
CPNE3-209ENST00000620393 PALM2Q8IXS6 379 aa8.07□□□□□ -1.12
CPNE3-209ENST00000620393 ZBED8Q8IZ13 594 aa8.07□□□□□ -1.12
CPNE3-209ENST00000620393 NDUFAF2Q8N183 169 aa8.07□□□□□ -1.12
CPNE3-209ENST00000620393 MPP5Q8N3R9 675 aa8.07□□□□□ -1.12
CPNE3-209ENST00000620393 MREGQ8N565 214 aa8.07□□□□□ -1.12
CPNE3-209ENST00000620393 TXNDC5Q8NBS9 432 aaKnown RBP8.07□□□□□ -1.12
CPNE3-209ENST00000620393 FBXO36Q8NEA4 188 aa8.07□□□□□ -1.12
CPNE3-209ENST00000620393 LPCAT1Q8NF37 534 aa8.07□□□□□ -1.12
CPNE3-209ENST00000620393 PIP4K2CQ8TBX8 421 aa8.07□□□□□ -1.12
CPNE3-209ENST00000620393 ANKRD7Q92527 254 aa8.07□□□□□ -1.12
CPNE3-209ENST00000620393 STAMBPL1Q96FJ0 436 aa8.07□□□□□ -1.12
CPNE3-209ENST00000620393 SCRN2Q96FV2 425 aa8.07□□□□□ -1.12
CPNE3-209ENST00000620393 C9orf72Q96LT7 481 aa8.07□□□□□ -1.12
CPNE3-209ENST00000620393 RANBP9Q96S59 729 aa8.07□□□□□ -1.12
CPNE3-209ENST00000620393 KIFC1Q9BW19 673 aa8.07□□□□□ -1.12
CPNE3-209ENST00000620393 RSPH9Q9H1X1 276 aaPredicted RBP8.07□□□□□ -1.12
CPNE3-209ENST00000620393 TRABDQ9H4I3 376 aa8.07□□□□□ -1.12
CPNE3-209ENST00000620393 MAGEE1Q9HCI5 957 aa8.07□□□□□ -1.12
CPNE3-209ENST00000620393 LTB4R2Q9NPC1 389 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms