RNA–Protein interactions for RNA: ENST00000619890.1

SSX4B-202, Transcript of SSX family member 4B, humanhuman

TSL 5 BASIC

Gene SSX4B, Length 1,092 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4B-202ENST00000619890 CR2P20023 1033 aa6.13□□□□□ -1.43
SSX4B-202ENST00000619890 ACVRL1P37023 503 aa6.13□□□□□ -1.43
SSX4B-202ENST00000619890 HSPA9P38646 679 aaKnown RBP6.13□□□□□ -1.43
SSX4B-202ENST00000619890 ARHGAP25P42331 645 aa6.13□□□□□ -1.43
SSX4B-202ENST00000619890 NUMBP49757 651 aa6.13□□□□□ -1.43
SSX4B-202ENST00000619890 CCT8P50990 548 aa6.13□□□□□ -1.43
SSX4B-202ENST00000619890 SUOXP51687 545 aa6.13□□□□□ -1.43
SSX4B-202ENST00000619890 GALCP54803 685 aa6.13□□□□□ -1.43
SSX4B-202ENST00000619890 RHOAP61586 193 aa6.13□□□□□ -1.43
SSX4B-202ENST00000619890 SLC25A11Q02978 314 aaKnown RBP6.13□□□□□ -1.43
SSX4B-202ENST00000619890 CCDC173Q0VFZ6 552 aa6.13□□□□□ -1.43
SSX4B-202ENST00000619890 CNTN1Q12860 1018 aa6.13□□□□□ -1.43
SSX4B-202ENST00000619890 OVGP1Q12889 678 aa6.13□□□□□ -1.43
SSX4B-202ENST00000619890 GRIK2Q13002 908 aa6.13□□□□□ -1.43
SSX4B-202ENST00000619890 TBX2Q13207 712 aaPredicted RBP6.13□□□□□ -1.43
SSX4B-202ENST00000619890 ZNF211Q13398 564 aaPredicted RBP6.13□□□□□ -1.43
SSX4B-202ENST00000619890 DPYSQ14117 519 aa6.13□□□□□ -1.43
SSX4B-202ENST00000619890 RFTN1Q14699 578 aaPredicted RBP6.13□□□□□ -1.43
SSX4B-202ENST00000619890 RTP5Q14D33 572 aa6.13□□□□□ -1.43
SSX4B-202ENST00000619890 INAVAQ3KP66 663 aa6.13□□□□□ -1.43
SSX4B-202ENST00000619890 CARD16Q5EG05 197 aa6.13□□□□□ -1.43
SSX4B-202ENST00000619890 PIP5KL1Q5T9C9 394 aa6.13□□□□□ -1.43
SSX4B-202ENST00000619890 ARHGAP40Q5TG30 622 aa6.13□□□□□ -1.43
SSX4B-202ENST00000619890 NAPEPLDQ6IQ20 393 aa6.13□□□□□ -1.43
SSX4B-202ENST00000619890 KIAA1161Q6NSJ0 714 aa6.13□□□□□ -1.43
SSX4B-202ENST00000619890 NCEH1Q6PIU2 408 aa6.13□□□□□ -1.43
SSX4B-202ENST00000619890 TMCO3Q6UWJ1 677 aa6.13□□□□□ -1.43
SSX4B-202ENST00000619890 DPY19L3Q6ZPD9 716 aa6.13□□□□□ -1.43
SSX4B-202ENST00000619890 ERN2Q76MJ5 926 aaKnown RBP6.13□□□□□ -1.43
SSX4B-202ENST00000619890 POLNQ7Z5Q5 900 aa6.13□□□□□ -1.43
SSX4B-202ENST00000619890 ADAT2Q7Z6V5 191 aaKnown RBP6.13□□□□□ -1.43
SSX4B-202ENST00000619890 PRPF39Q86UA1 669 aaKnown RBP6.13□□□□□ -1.43
SSX4B-202ENST00000619890 IQCHQ86VS3 1027 aa6.13□□□□□ -1.43
SSX4B-202ENST00000619890 TMPRSS12Q86WS5 348 aa6.13□□□□□ -1.43
SSX4B-202ENST00000619890 VSIG1Q86XK7 387 aa6.13□□□□□ -1.43
SSX4B-202ENST00000619890 DNAAF5Q86Y56 855 aa6.13□□□□□ -1.43
SSX4B-202ENST00000619890 BBS5Q8N3I7 341 aa6.13□□□□□ -1.43
SSX4B-202ENST00000619890 OXR1Q8N573 874 aa6.13□□□□□ -1.43
SSX4B-202ENST00000619890 ARFGAP1Q8N6T3 406 aa6.13□□□□□ -1.43
SSX4B-202ENST00000619890 C1orf216Q8TAB5 229 aa6.13□□□□□ -1.43
SSX4B-202ENST00000619890 FAM71BQ8TC56 605 aa6.13□□□□□ -1.43
SSX4B-202ENST00000619890 GRIN3AQ8TCU5 1115 aa6.13□□□□□ -1.43
SSX4B-202ENST00000619890 RFFLQ8WZ73 363 aa6.13□□□□□ -1.43
SSX4B-202ENST00000619890 HSPH1Q92598 858 aa6.13□□□□□ -1.43
SSX4B-202ENST00000619890 NXPE2Q96DL1 559 aa6.13□□□□□ -1.43
SSX4B-202ENST00000619890 HMCESQ96FZ2 354 aa6.13□□□□□ -1.43
SSX4B-202ENST00000619890 ZNF599Q96NL3 588 aa6.13□□□□□ -1.43
SSX4B-202ENST00000619890 PSMG3-AS1Q96PY0 264 aa6.13□□□□□ -1.43
SSX4B-202ENST00000619890 KCTD15Q96SI1 283 aaPredicted RBP6.13□□□□□ -1.43
SSX4B-202ENST00000619890 ZNF670Q9BS34 389 aa6.13□□□□□ -1.43
SSX4B-202ENST00000619890 TM6SF2Q9BZW4 377 aa6.13□□□□□ -1.43
SSX4B-202ENST00000619890 TRIM7Q9C029 511 aa6.13□□□□□ -1.43
SSX4B-202ENST00000619890 NEUROG2Q9H2A3 272 aa6.13□□□□□ -1.43
SSX4B-202ENST00000619890 TNKS2Q9H2K2 1166 aa6.13□□□□□ -1.43
SSX4B-202ENST00000619890 NOL6Q9H6R4 1146 aaKnown RBP6.13□□□□□ -1.43
SSX4B-202ENST00000619890 ZDHHC6Q9H6R6 413 aa6.13□□□□□ -1.43
SSX4B-202ENST00000619890 NHEJ1Q9H9Q4 299 aaPredicted RBP6.13□□□□□ -1.43
SSX4B-202ENST00000619890 SP110Q9HB58 689 aa6.13□□□□□ -1.43
SSX4B-202ENST00000619890 PDFQ9HBH1 243 aa6.13□□□□□ -1.43
SSX4B-202ENST00000619890 CPNE5Q9HCH3 593 aa6.13□□□□□ -1.43
SSX4B-202ENST00000619890 TM9SF3Q9HD45 589 aa6.13□□□□□ -1.43
SSX4B-202ENST00000619890 EVA1BQ9NVM1 165 aa6.13□□□□□ -1.43
SSX4B-202ENST00000619890 HAUS2Q9NVX0 235 aa6.13□□□□□ -1.43
SSX4B-202ENST00000619890 GPATCH2LQ9NWQ4 482 aa6.13□□□□□ -1.43
SSX4B-202ENST00000619890 UBA2Q9UBT2 640 aaPredicted RBP6.13□□□□□ -1.43
SSX4B-202ENST00000619890 PCSK1NQ9UHG2 260 aa6.13□□□□□ -1.43
SSX4B-202ENST00000619890 PCDHGB2Q9Y5G2 931 aa6.13□□□□□ -1.43
SSX4B-202ENST00000619890 AK5Q9Y6K8 562 aa6.13□□□□□ -1.43
SSX4B-202ENST00000619890 ZFHX3Q15911 3703 aa6.13□□□□□ -1.43
SSX4B-202ENST00000619890 TMEM131Q92545 1883 aa6.13□□□□□ -1.43
SSX4B-202ENST00000619890 TBC1D3DA0A087WVF3 549 aa6.12□□□□□ -1.43
SSX4B-202ENST00000619890 TBC1D3IA0A087WXS9 549 aa6.12□□□□□ -1.43
SSX4B-202ENST00000619890 TBC1D3EA0A087X179 549 aa6.12□□□□□ -1.43
SSX4B-202ENST00000619890 TBC1D3KA0A087X1G2 549 aa6.12□□□□□ -1.43
SSX4B-202ENST00000619890 TBC1D3FA6NER0 549 aaPredicted RBP6.12□□□□□ -1.43
SSX4B-202ENST00000619890 FAM47DPA6NHR8 397 aa6.12□□□□□ -1.43
SSX4B-202ENST00000619890 ANKRD36A6QL64 1941 aa6.12□□□□□ -1.43
SSX4B-202ENST00000619890 GOLGA6L6A8MZA4 724 aa6.12□□□□□ -1.43
SSX4B-202ENST00000619890 ZNF487B1APH4 448 aa6.12□□□□□ -1.43
SSX4B-202ENST00000619890 TBC1D3LB9A6J9 549 aa6.12□□□□□ -1.43
SSX4B-202ENST00000619890 K7ERQ8 282 aa6.12□□□□□ -1.43
SSX4B-202ENST00000619890 VILLO15195 856 aa6.12□□□□□ -1.43
SSX4B-202ENST00000619890 FLRT2O43155 660 aa6.12□□□□□ -1.43
SSX4B-202ENST00000619890 PRAMEF11O60813 436 aa6.12□□□□□ -1.43
SSX4B-202ENST00000619890 ZNF821O75541 412 aaPredicted RBP6.12□□□□□ -1.43
SSX4B-202ENST00000619890 IPO7O95373 1038 aaKnown RBP6.12□□□□□ -1.43
SSX4B-202ENST00000619890 POP4O95707 220 aaKnown RBP6.12□□□□□ -1.43
SSX4B-202ENST00000619890 CD160O95971 181 aa6.12□□□□□ -1.43
SSX4B-202ENST00000619890 TBC1D3HP0C7X1 549 aa6.12□□□□□ -1.43
SSX4B-202ENST00000619890 RARAP10276 462 aa6.12□□□□□ -1.43
SSX4B-202ENST00000619890 ADRB3P13945 408 aa6.12□□□□□ -1.43
SSX4B-202ENST00000619890 ERCC2P18074 760 aa6.12□□□□□ -1.43
SSX4B-202ENST00000619890 NFKBIAP25963 317 aa6.12□□□□□ -1.43
SSX4B-202ENST00000619890 MAOBP27338 520 aa6.12□□□□□ -1.43
SSX4B-202ENST00000619890 IL1R2P27930 398 aa6.12□□□□□ -1.43
SSX4B-202ENST00000619890 CD38P28907 300 aa6.12□□□□□ -1.43
SSX4B-202ENST00000619890 SERPINA4P29622 427 aa6.12□□□□□ -1.43
SSX4B-202ENST00000619890 CYLC1P35663 651 aaPredicted RBP6.12□□□□□ -1.43
SSX4B-202ENST00000619890 ADKP55263 362 aaKnown RBP6.12□□□□□ -1.43
SSX4B-202ENST00000619890 CDH6P55285 790 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms