RNA–Protein interactions for RNA: ENST00000619322.4

CBWD3-215, Transcript of COBW domain containing 3, humanhuman

TSL 5

Gene CBWD3, Length 3,301 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-215ENST00000619322 TRIM73Q86UV7 250 aa5.49□□□□□ -1.53
CBWD3-215ENST00000619322 HORMAD1Q86X24 394 aa5.49□□□□□ -1.53
CBWD3-215ENST00000619322 OR8K1Q8NGG5 319 aa5.49□□□□□ -1.53
CBWD3-215ENST00000619322 PTPRN2Q92932 1015 aa5.49□□□□□ -1.53
CBWD3-215ENST00000619322 COX14Q96I36 57 aa5.49□□□□□ -1.53
CBWD3-215ENST00000619322 TMEM74Q96NL1 305 aa5.49□□□□□ -1.53
CBWD3-215ENST00000619322 TSGA13Q96PP4 275 aa5.49□□□□□ -1.53
CBWD3-215ENST00000619322 VPS35Q96QK1 796 aa5.49□□□□□ -1.53
CBWD3-215ENST00000619322 TBCBQ99426 244 aa5.49□□□□□ -1.53
CBWD3-215ENST00000619322 SEPT5Q99719 369 aaPredicted RBP5.49□□□□□ -1.53
CBWD3-215ENST00000619322 TEX101Q9BY14 249 aa5.49□□□□□ -1.53
CBWD3-215ENST00000619322 FUT8Q9BYC5 575 aa5.49□□□□□ -1.53
CBWD3-215ENST00000619322 EBF3Q9H4W6 596 aa5.49□□□□□ -1.53
CBWD3-215ENST00000619322 FBRSL1Q9HCM7 1045 aaKnown RBP5.49□□□□□ -1.53
CBWD3-215ENST00000619322 MED4Q9NPJ6 270 aa5.49□□□□□ -1.53
CBWD3-215ENST00000619322 CISHQ9NSE2 258 aa5.49□□□□□ -1.53
CBWD3-215ENST00000619322 PRUNE2Q8WUY3 3088 aa5.49□□□□□ -1.53
CBWD3-215ENST00000619322 CCDC187A0A096LP49 1063 aa5.49□□□□□ -1.53
CBWD3-215ENST00000619322 A8MXQ7 604 aa5.49□□□□□ -1.53
CBWD3-215ENST00000619322 CETN3O15182 167 aa5.49□□□□□ -1.53
CBWD3-215ENST00000619322 RNASEH1O60930 286 aaKnown RBP5.49□□□□□ -1.53
CBWD3-215ENST00000619322 LRRN2O75325 713 aa5.49□□□□□ -1.53
CBWD3-215ENST00000619322 ESRRAP11474 423 aaPredicted RBP5.49□□□□□ -1.53
CBWD3-215ENST00000619322 PRLRP16471 622 aa5.49□□□□□ -1.53
CBWD3-215ENST00000619322 RENBPP51606 427 aa5.49□□□□□ -1.53
CBWD3-215ENST00000619322 RPS21P63220 83 aaKnown RBP5.49□□□□□ -1.53
CBWD3-215ENST00000619322 PPP3CAQ08209 521 aa5.49□□□□□ -1.53
CBWD3-215ENST00000619322 TRPC3Q13507 836 aa5.49□□□□□ -1.53
CBWD3-215ENST00000619322 WHAMMP3Q1A5X7 153 aa5.49□□□□□ -1.53
CBWD3-215ENST00000619322 PLEKHG6Q3KR16 790 aa5.49□□□□□ -1.53
CBWD3-215ENST00000619322 VWA3BQ502W6 1294 aa5.49□□□□□ -1.53
CBWD3-215ENST00000619322 YOD1Q5VVQ6 348 aaPredicted RBP5.49□□□□□ -1.53
CBWD3-215ENST00000619322 KLHL10Q6JEL2 608 aa5.49□□□□□ -1.53
CBWD3-215ENST00000619322 RPUSD3Q6P087 351 aaKnown RBP5.49□□□□□ -1.53
CBWD3-215ENST00000619322 SPATS2Q86XZ4 545 aaKnown RBP5.49□□□□□ -1.53
CBWD3-215ENST00000619322 CREBRFQ8IUR6 639 aa5.49□□□□□ -1.53
CBWD3-215ENST00000619322 SHISA5Q8N114 240 aa5.49□□□□□ -1.53
CBWD3-215ENST00000619322 TXNDC5Q8NBS9 432 aaKnown RBP5.49□□□□□ -1.53
CBWD3-215ENST00000619322 RNF169Q8NCN4 708 aa5.49□□□□□ -1.53
CBWD3-215ENST00000619322 ING5Q8WYH8 240 aa5.49□□□□□ -1.53
CBWD3-215ENST00000619322 YIPF2Q9BWQ6 316 aa5.49□□□□□ -1.53
CBWD3-215ENST00000619322 PARD6BQ9BYG5 372 aa5.49□□□□□ -1.53
CBWD3-215ENST00000619322 FRMD8Q9BZ67 464 aaPredicted RBP5.49□□□□□ -1.53
CBWD3-215ENST00000619322 FBXO8Q9NRD0 319 aa5.49□□□□□ -1.53
CBWD3-215ENST00000619322 FTSJ1Q9UET6 329 aa5.49□□□□□ -1.53
CBWD3-215ENST00000619322 PCDHGA9Q9Y5G4 932 aaKnown RBP5.49□□□□□ -1.53
CBWD3-215ENST00000619322 SPTY2D1-AS1A0A0U1RR47 76 aa5.48□□□□□ -1.53
CBWD3-215ENST00000619322 A0A1W2PQH9 124 aa5.48□□□□□ -1.53
CBWD3-215ENST00000619322 BTNL10A8MVZ5 291 aa5.48□□□□□ -1.53
CBWD3-215ENST00000619322 LMO7DNF2Z398 122 aa5.48□□□□□ -1.53
CBWD3-215ENST00000619322 PIAS2O75928 621 aa5.48□□□□□ -1.53
CBWD3-215ENST00000619322 AFPP02771 609 aaKnown RBP5.48□□□□□ -1.53
CBWD3-215ENST00000619322 EDN3P14138 238 aa5.48□□□□□ -1.53
CBWD3-215ENST00000619322 HNRNPA2B1P22626 353 aaKnown RBP5.48□□□□□ -1.53
CBWD3-215ENST00000619322 BDNFP23560 247 aa5.48□□□□□ -1.53
CBWD3-215ENST00000619322 NFKBIAP25963 317 aa5.48□□□□□ -1.53
CBWD3-215ENST00000619322 RFC1P35251 1148 aaPredicted RBP5.48□□□□□ -1.53
CBWD3-215ENST00000619322 GRIK1P39086 918 aa5.48□□□□□ -1.53
CBWD3-215ENST00000619322 SERPINH1P50454 418 aaKnown RBP5.48□□□□□ -1.53
CBWD3-215ENST00000619322 MXI1P50539 228 aa5.48□□□□□ -1.53
CBWD3-215ENST00000619322 UBXN1Q04323 297 aa5.48□□□□□ -1.53
CBWD3-215ENST00000619322 ELP6Q0PNE2 266 aa5.48□□□□□ -1.53
CBWD3-215ENST00000619322 ZNF658BQ4V348 819 aaPredicted RBP5.48□□□□□ -1.53
CBWD3-215ENST00000619322 TRIM61Q5EBN2 209 aa5.48□□□□□ -1.53
CBWD3-215ENST00000619322 CCDC181Q5TID7 509 aa5.48□□□□□ -1.53
CBWD3-215ENST00000619322 BRAT1Q6PJG6 821 aa5.48□□□□□ -1.53
CBWD3-215ENST00000619322 GALNT13Q8IUC8 556 aa5.48□□□□□ -1.53
CBWD3-215ENST00000619322 ALLCQ8N6M5 410 aa5.48□□□□□ -1.53
CBWD3-215ENST00000619322 GRIN3AQ8TCU5 1115 aa5.48□□□□□ -1.53
CBWD3-215ENST00000619322 OR8D1Q8WZ84 308 aa5.48□□□□□ -1.53
CBWD3-215ENST00000619322 CYFIP2Q96F07 1278 aa5.48□□□□□ -1.53
CBWD3-215ENST00000619322 MEGF10Q96KG7 1140 aa5.48□□□□□ -1.53
CBWD3-215ENST00000619322 DMRTB1Q96MA1 342 aa5.48□□□□□ -1.53
CBWD3-215ENST00000619322 CD180Q99467 661 aa5.48□□□□□ -1.53
CBWD3-215ENST00000619322 KLF6Q99612 283 aaPredicted RBP5.48□□□□□ -1.53
CBWD3-215ENST00000619322 KLC2Q9H0B6 622 aa5.48□□□□□ -1.53
CBWD3-215ENST00000619322 BTBD1Q9H0C5 482 aa5.48□□□□□ -1.53
CBWD3-215ENST00000619322 VPS16Q9H269 839 aa5.48□□□□□ -1.53
CBWD3-215ENST00000619322 HAUS4Q9H6D7 363 aa5.48□□□□□ -1.53
CBWD3-215ENST00000619322 POLR1BQ9H9Y6 1135 aa5.48□□□□□ -1.53
CBWD3-215ENST00000619322 DNAJC17Q9NVM6 304 aaKnown RBP5.48□□□□□ -1.53
CBWD3-215ENST00000619322 FRRS1LQ9P0K9 344 aa5.48□□□□□ -1.53
CBWD3-215ENST00000619322 MARCH2Q9P0N8 246 aa5.48□□□□□ -1.53
CBWD3-215ENST00000619322 C5AR2Q9P296 337 aa5.48□□□□□ -1.53
CBWD3-215ENST00000619322 PCDHGB6Q9Y5F9 930 aa5.48□□□□□ -1.53
CBWD3-215ENST00000619322 FADS3Q9Y5Q0 445 aa5.48□□□□□ -1.53
CBWD3-215ENST00000619322 EPN1Q9Y6I3 576 aaPredicted RBP5.48□□□□□ -1.53
CBWD3-215ENST00000619322 NPHP3-ACAD11A0A0J9YXS1 232 aa5.48□□□□□ -1.53
CBWD3-215ENST00000619322 TLR4O00206 839 aa5.48□□□□□ -1.53
CBWD3-215ENST00000619322 MDM4O15151 490 aa5.48□□□□□ -1.53
CBWD3-215ENST00000619322 NUDT21O43809 227 aaKnown RBP5.48□□□□□ -1.53
CBWD3-215ENST00000619322 TMCC2O75069 709 aa5.48□□□□□ -1.53
CBWD3-215ENST00000619322 ZNF30P17039 623 aa5.48□□□□□ -1.53
CBWD3-215ENST00000619322 CR2P20023 1033 aa5.48□□□□□ -1.53
CBWD3-215ENST00000619322 TACR2P21452 398 aa5.48□□□□□ -1.53
CBWD3-215ENST00000619322 CD38P28907 300 aa5.48□□□□□ -1.53
CBWD3-215ENST00000619322 HLA-FP30511 346 aa5.48□□□□□ -1.53
CBWD3-215ENST00000619322 PCK1P35558 622 aa5.48□□□□□ -1.53
CBWD3-215ENST00000619322 CSRP3P50461 194 aa5.48□□□□□ -1.53
CBWD3-215ENST00000619322 NOVA1P51513 510 aaKnown RBP5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms