RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 CST8O60676 142 aa5.31□□□□□ -1.56
SHMT1-211ENST00000618902 ZNF189O75820 626 aaPredicted RBP5.31□□□□□ -1.56
SHMT1-211ENST00000618902 CER1O95813 267 aa5.31□□□□□ -1.56
SHMT1-211ENST00000618902 NUDT17P0C025 328 aa5.31□□□□□ -1.56
SHMT1-211ENST00000618902 CEACAM1P13688 526 aa5.31□□□□□ -1.56
SHMT1-211ENST00000618902 NR1D1P20393 614 aa5.31□□□□□ -1.56
SHMT1-211ENST00000618902 MAPK8P45983 427 aa5.31□□□□□ -1.56
SHMT1-211ENST00000618902 RECQLP46063 649 aaPredicted RBP5.31□□□□□ -1.56
SHMT1-211ENST00000618902 TPMTP51580 245 aa5.31□□□□□ -1.56
SHMT1-211ENST00000618902 ATXN3P54252 364 aaPredicted RBP5.31□□□□□ -1.56
SHMT1-211ENST00000618902 DYNLT1P63172 113 aa5.31□□□□□ -1.56
SHMT1-211ENST00000618902 GNGT1P63211 74 aa5.31□□□□□ -1.56
SHMT1-211ENST00000618902 CREB5Q02930 508 aa5.31□□□□□ -1.56
SHMT1-211ENST00000618902 RAD51Q06609 339 aa5.31□□□□□ -1.56
SHMT1-211ENST00000618902 ZNF33AQ06730 810 aa5.31□□□□□ -1.56
SHMT1-211ENST00000618902 SLC10A7Q0GE19 358 aa5.31□□□□□ -1.56
SHMT1-211ENST00000618902 RFTN1Q14699 578 aaPredicted RBP5.31□□□□□ -1.56
SHMT1-211ENST00000618902 SUZ12Q15022 739 aaKnown RBP5.31□□□□□ -1.56
SHMT1-211ENST00000618902 SIX1Q15475 284 aaPredicted RBP5.31□□□□□ -1.56
SHMT1-211ENST00000618902 TEAD4Q15561 434 aa5.31□□□□□ -1.56
SHMT1-211ENST00000618902 KCTD19Q17RG1 926 aaPredicted RBP5.31□□□□□ -1.56
SHMT1-211ENST00000618902 INAVAQ3KP66 663 aa5.31□□□□□ -1.56
SHMT1-211ENST00000618902 POM121L1PQ3SYA9 428 aa5.31□□□□□ -1.56
SHMT1-211ENST00000618902 AASDHQ4L235 1098 aaPredicted RBP5.31□□□□□ -1.56
SHMT1-211ENST00000618902 SLC45A4Q5BKX6 768 aa5.31□□□□□ -1.56
SHMT1-211ENST00000618902 RALGPS1Q5JS13 557 aa5.31□□□□□ -1.56
SHMT1-211ENST00000618902 KAZNQ674X7 775 aa5.31□□□□□ -1.56
SHMT1-211ENST00000618902 C22orf39Q6P5X5 142 aa5.31□□□□□ -1.56
SHMT1-211ENST00000618902 DPY19L3Q6ZPD9 716 aa5.31□□□□□ -1.56
SHMT1-211ENST00000618902 BBS12Q6ZW61 710 aa5.31□□□□□ -1.56
SHMT1-211ENST00000618902 TAOK1Q7L7X3 1001 aa5.31□□□□□ -1.56
SHMT1-211ENST00000618902 DGLUCYQ7Z3D6 616 aa5.31□□□□□ -1.56
SHMT1-211ENST00000618902 RFX6Q8HWS3 928 aa5.31□□□□□ -1.56
SHMT1-211ENST00000618902 MMAAQ8IVH4 418 aaKnown RBP5.31□□□□□ -1.56
SHMT1-211ENST00000618902 RAVER1Q8IY67 606 aaKnown RBP5.31□□□□□ -1.56
SHMT1-211ENST00000618902 KIAA2013Q8IYS2 634 aa5.31□□□□□ -1.56
SHMT1-211ENST00000618902 RCOR2Q8IZ40 523 aa5.31□□□□□ -1.56
SHMT1-211ENST00000618902 AADATQ8N5Z0 425 aa5.31□□□□□ -1.56
SHMT1-211ENST00000618902 PCDH20Q8N6Y1 951 aaKnown RBP5.31□□□□□ -1.56
SHMT1-211ENST00000618902 ATP11CQ8NB49 1132 aa5.31□□□□□ -1.56
SHMT1-211ENST00000618902 TSEN2Q8NCE0 465 aaKnown RBP5.31□□□□□ -1.56
SHMT1-211ENST00000618902 OR2T34Q8NGX1 318 aa5.31□□□□□ -1.56
SHMT1-211ENST00000618902 OR6K2Q8NGY2 324 aa5.31□□□□□ -1.56
SHMT1-211ENST00000618902 MAGEC3Q8TD91 643 aa5.31□□□□□ -1.56
SHMT1-211ENST00000618902 ASB12Q8WXK4 309 aa5.31□□□□□ -1.56
SHMT1-211ENST00000618902 IFT81Q8WYA0 676 aa5.31□□□□□ -1.56
SHMT1-211ENST00000618902 OR8D1Q8WZ84 308 aa5.31□□□□□ -1.56
SHMT1-211ENST00000618902 ARRDC3Q96B67 414 aa5.31□□□□□ -1.56
SHMT1-211ENST00000618902 HAUS1Q96CS2 278 aa5.31□□□□□ -1.56
SHMT1-211ENST00000618902 IFT43Q96FT9 208 aa5.31□□□□□ -1.56
SHMT1-211ENST00000618902 PGM2Q96G03 612 aa5.31□□□□□ -1.56
SHMT1-211ENST00000618902 EXOC2Q96KP1 924 aa5.31□□□□□ -1.56
SHMT1-211ENST00000618902 ZIM3Q96PE6 472 aa5.31□□□□□ -1.56
SHMT1-211ENST00000618902 KRT12Q99456 494 aa5.31□□□□□ -1.56
SHMT1-211ENST00000618902 LGMNQ99538 433 aa5.31□□□□□ -1.56
SHMT1-211ENST00000618902 FAM118BQ9BPY3 351 aa5.31□□□□□ -1.56
SHMT1-211ENST00000618902 OSBPL1AQ9BXW6 950 aa5.31□□□□□ -1.56
SHMT1-211ENST00000618902 OSBPL8Q9BZF1 889 aa5.31□□□□□ -1.56
SHMT1-211ENST00000618902 TM6SF2Q9BZW4 377 aa5.31□□□□□ -1.56
SHMT1-211ENST00000618902 PHACTR1Q9C0D0 580 aa5.31□□□□□ -1.56
SHMT1-211ENST00000618902 ARRDC1-AS1Q9H2J1 176 aa5.31□□□□□ -1.56
SHMT1-211ENST00000618902 SLC32A1Q9H598 525 aa5.31□□□□□ -1.56
SHMT1-211ENST00000618902 PPCSQ9HAB8 311 aa5.31□□□□□ -1.56
SHMT1-211ENST00000618902 PREBQ9HCU5 417 aa5.31□□□□□ -1.56
SHMT1-211ENST00000618902 TMEM9BQ9NQ34 198 aa5.31□□□□□ -1.56
SHMT1-211ENST00000618902 DNAAF2Q9NVR5 837 aaKnown RBP5.31□□□□□ -1.56
SHMT1-211ENST00000618902 KCTD5Q9NXV2 234 aa5.31□□□□□ -1.56
SHMT1-211ENST00000618902 DDX56Q9NY93 547 aaKnown RBP5.31□□□□□ -1.56
SHMT1-211ENST00000618902 MTRF1LQ9UGC7 380 aaKnown RBP5.31□□□□□ -1.56
SHMT1-211ENST00000618902 PCYOX1Q9UHG3 505 aa5.31□□□□□ -1.56
SHMT1-211ENST00000618902 PPM1HQ9ULR3 514 aa5.31□□□□□ -1.56
SHMT1-211ENST00000618902 NFU1Q9UMS0 254 aa5.31□□□□□ -1.56
SHMT1-211ENST00000618902 R3HDM2Q9Y2K5 976 aaKnown RBP5.31□□□□□ -1.56
SHMT1-211ENST00000618902 ACACAQ13085 2346 aa5.31□□□□□ -1.56
SHMT1-211ENST00000618902 CACNA1BQ00975 2339 aa5.3□□□□□ -1.56
SHMT1-211ENST00000618902 GOLGA4Q13439 2230 aaKnown RBP5.3□□□□□ -1.56
SHMT1-211ENST00000618902 ARHGAP42A6NI28 874 aa5.3□□□□□ -1.56
SHMT1-211ENST00000618902 KCNK1O00180 336 aa5.3□□□□□ -1.56
SHMT1-211ENST00000618902 ARHGAP33O14559 1287 aa5.3□□□□□ -1.56
SHMT1-211ENST00000618902 APOL1O14791 398 aa5.3□□□□□ -1.56
SHMT1-211ENST00000618902 TM4SF5O14894 197 aa5.3□□□□□ -1.56
SHMT1-211ENST00000618902 MID1O15344 667 aa5.3□□□□□ -1.56
SHMT1-211ENST00000618902 AP1G1O43747 822 aa5.3□□□□□ -1.56
SHMT1-211ENST00000618902 BNIP3LO60238 219 aa5.3□□□□□ -1.56
SHMT1-211ENST00000618902 PPFIA2O75334 1257 aa5.3□□□□□ -1.56
SHMT1-211ENST00000618902 FSBPO95073 299 aa5.3□□□□□ -1.56
SHMT1-211ENST00000618902 SEMA4FO95754 770 aa5.3□□□□□ -1.56
SHMT1-211ENST00000618902 GSRP00390 522 aa5.3□□□□□ -1.56
SHMT1-211ENST00000618902 JCHAINP01591 159 aa5.3□□□□□ -1.56
SHMT1-211ENST00000618902 ITIH2P19823 946 aa5.3□□□□□ -1.56
SHMT1-211ENST00000618902 CR2P20023 1033 aa5.3□□□□□ -1.56
SHMT1-211ENST00000618902 CES1P23141 567 aa5.3□□□□□ -1.56
SHMT1-211ENST00000618902 CD27P26842 260 aa5.3□□□□□ -1.56
SHMT1-211ENST00000618902 LSP1P33241 339 aa5.3□□□□□ -1.56
SHMT1-211ENST00000618902 PTPN7P35236 360 aa5.3□□□□□ -1.56
SHMT1-211ENST00000618902 DRD3P35462 400 aa5.3□□□□□ -1.56
SHMT1-211ENST00000618902 CETN2P41208 172 aa5.3□□□□□ -1.56
SHMT1-211ENST00000618902 GARSP41250 739 aaKnown RBP5.3□□□□□ -1.56
SHMT1-211ENST00000618902 GRIA4P48058 902 aa5.3□□□□□ -1.56
SHMT1-211ENST00000618902 PSMD8P48556 350 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms