RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 APOC2P02655 101 aa8.31□□□□□ -1.08
NEK3-209ENST00000618856 HLA-DQB2P05538 268 aa8.31□□□□□ -1.08
NEK3-209ENST00000618856 PYGMP11217 842 aa8.31□□□□□ -1.08
NEK3-209ENST00000618856 PECAM1P16284 738 aaPredicted RBP8.31□□□□□ -1.08
NEK3-209ENST00000618856 MAT2AP31153 395 aaKnown RBP8.31□□□□□ -1.08
NEK3-209ENST00000618856 RWDD2BP57060 319 aa8.31□□□□□ -1.08
NEK3-209ENST00000618856 PFN3P60673 137 aa8.31□□□□□ -1.08
NEK3-209ENST00000618856 MAXP61244 160 aa8.31□□□□□ -1.08
NEK3-209ENST00000618856 POLR2LP62875 67 aaKnown RBP8.31□□□□□ -1.08
NEK3-209ENST00000618856 NIPAL4Q0D2K0 466 aa8.31□□□□□ -1.08
NEK3-209ENST00000618856 WASHC5Q12768 1159 aa8.31□□□□□ -1.08
NEK3-209ENST00000618856 KLF1Q13351 362 aaPredicted RBP8.31□□□□□ -1.08
NEK3-209ENST00000618856 XRCC4Q13426 336 aa8.31□□□□□ -1.08
NEK3-209ENST00000618856 SLC14A2Q15849 920 aa8.31□□□□□ -1.08
NEK3-209ENST00000618856 LAYNQ6UX15 382 aa8.31□□□□□ -1.08
NEK3-209ENST00000618856 KYAT3Q6YP21 454 aaKnown RBP8.31□□□□□ -1.08
NEK3-209ENST00000618856 DPPA4Q7L190 304 aa8.31□□□□□ -1.08
NEK3-209ENST00000618856 BZW1Q7L1Q6 419 aaKnown RBP8.31□□□□□ -1.08
NEK3-209ENST00000618856 ERMP1Q7Z2K6 904 aa8.31□□□□□ -1.08
NEK3-209ENST00000618856 KANSL1Q7Z3B3 1105 aa8.31□□□□□ -1.08
NEK3-209ENST00000618856 KIAA1328Q86T90 577 aa8.31□□□□□ -1.08
NEK3-209ENST00000618856 RFX6Q8HWS3 928 aa8.31□□□□□ -1.08
NEK3-209ENST00000618856 RAVER1Q8IY67 606 aaKnown RBP8.31□□□□□ -1.08
NEK3-209ENST00000618856 SYCE1Q8N0S2 351 aa8.31□□□□□ -1.08
NEK3-209ENST00000618856 SLC22A18ASQ8N1D0 253 aa8.31□□□□□ -1.08
NEK3-209ENST00000618856 TP53I13Q8NBR0 393 aaPredicted RBP8.31□□□□□ -1.08
NEK3-209ENST00000618856 OR2I1PQ8NGU4 316 aa8.31□□□□□ -1.08
NEK3-209ENST00000618856 BAHD1Q8TBE0 780 aaPredicted RBP8.31□□□□□ -1.08
NEK3-209ENST00000618856 NSMCE1Q8WV22 266 aa8.31□□□□□ -1.08
NEK3-209ENST00000618856 PIH1D2Q8WWB5 315 aa8.31□□□□□ -1.08
NEK3-209ENST00000618856 SNX19Q92543 992 aa8.31□□□□□ -1.08
NEK3-209ENST00000618856 IFT43Q96FT9 208 aa8.31□□□□□ -1.08
NEK3-209ENST00000618856 SCRN2Q96FV2 425 aa8.31□□□□□ -1.08
NEK3-209ENST00000618856 PDLIM2Q96JY6 352 aa8.31□□□□□ -1.08
NEK3-209ENST00000618856 LYSMD1Q96S90 227 aa8.31□□□□□ -1.08
NEK3-209ENST00000618856 ELF4Q99607 663 aaPredicted RBP8.31□□□□□ -1.08
NEK3-209ENST00000618856 SEMA3CQ99985 751 aa8.31□□□□□ -1.08
NEK3-209ENST00000618856 TDRD1Q9BXT4 1180 aaKnown RBP8.31□□□□□ -1.08
NEK3-209ENST00000618856 GAREM1Q9H706 876 aa8.31□□□□□ -1.08
NEK3-209ENST00000618856 NT5MQ9NPB1 228 aa8.31□□□□□ -1.08
NEK3-209ENST00000618856 SCUBE2Q9NQ36 999 aa8.31□□□□□ -1.08
NEK3-209ENST00000618856 PLSCR2Q9NRY7 297 aa8.31□□□□□ -1.08
NEK3-209ENST00000618856 RBM22Q9NW64 420 aaKnown RBP eCLIP8.31□□□□□ -1.08
NEK3-209ENST00000618856 SAE1Q9UBE0 346 aaPredicted RBP8.31□□□□□ -1.08
NEK3-209ENST00000618856 PHTF1Q9UMS5 762 aa8.31□□□□□ -1.08
NEK3-209ENST00000618856 FNDC3AQ9Y2H6 1198 aaKnown RBP8.31□□□□□ -1.08
NEK3-209ENST00000618856 PCDHGC4Q9Y5F7 938 aa8.31□□□□□ -1.08
NEK3-209ENST00000618856 HEY1Q9Y5J3 304 aa8.31□□□□□ -1.08
NEK3-209ENST00000618856 DOCK9Q9BZ29 2069 aa8.31□□□□□ -1.08
NEK3-209ENST00000618856 MACROD2A1Z1Q3 448 aa8.3□□□□□ -1.08
NEK3-209ENST00000618856 GOLGA6L3A6NEY3 463 aa8.3□□□□□ -1.08
NEK3-209ENST00000618856 HACD1B0YJ81 288 aa8.3□□□□□ -1.08
NEK3-209ENST00000618856 H0Y8X5 98 aa8.3□□□□□ -1.08
NEK3-209ENST00000618856 KCNK1O00180 336 aa8.3□□□□□ -1.08
NEK3-209ENST00000618856 SLC31A1O15431 190 aa8.3□□□□□ -1.08
NEK3-209ENST00000618856 MAGEC1O60732 1142 aa8.3□□□□□ -1.08
NEK3-209ENST00000618856 MMP20O60882 483 aa8.3□□□□□ -1.08
NEK3-209ENST00000618856 OPHN1O60890 802 aa8.3□□□□□ -1.08
NEK3-209ENST00000618856 CER1O95813 267 aa8.3□□□□□ -1.08
NEK3-209ENST00000618856 JCHAINP01591 159 aa8.3□□□□□ -1.08
NEK3-209ENST00000618856 PDHA1P08559 390 aa8.3□□□□□ -1.08
NEK3-209ENST00000618856 CEACAM1P13688 526 aa8.3□□□□□ -1.08
NEK3-209ENST00000618856 PRLRP16471 622 aa8.3□□□□□ -1.08
NEK3-209ENST00000618856 AKT2P31751 481 aa8.3□□□□□ -1.08
NEK3-209ENST00000618856 LIG3P49916 1009 aa8.3□□□□□ -1.08
NEK3-209ENST00000618856 RPL26P61254 145 aaKnown RBP8.3□□□□□ -1.08
NEK3-209ENST00000618856 SKOR1P84550 965 aa8.3□□□□□ -1.08
NEK3-209ENST00000618856 STAT4Q14765 748 aa8.3□□□□□ -1.08
NEK3-209ENST00000618856 NOMO1Q15155 1222 aa8.3□□□□□ -1.08
NEK3-209ENST00000618856 CDKN3Q16667 212 aa8.3□□□□□ -1.08
NEK3-209ENST00000618856 TEX44Q53QW1 395 aa8.3□□□□□ -1.08
NEK3-209ENST00000618856 SLC45A4Q5BKX6 768 aa8.3□□□□□ -1.08
NEK3-209ENST00000618856 ERAP2Q6P179 960 aa8.3□□□□□ -1.08
NEK3-209ENST00000618856 GLRX5Q86SX6 157 aa8.3□□□□□ -1.08
NEK3-209ENST00000618856 DCP2Q8IU60 420 aaKnown RBP8.3□□□□□ -1.08
NEK3-209ENST00000618856 OXR1Q8N573 874 aa8.3□□□□□ -1.08
NEK3-209ENST00000618856 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.3□□□□□ -1.08
NEK3-209ENST00000618856 SAP25Q8TEE9 199 aa8.3□□□□□ -1.08
NEK3-209ENST00000618856 LRRN4Q8WUT4 740 aa8.3□□□□□ -1.08
NEK3-209ENST00000618856 SKA1Q96BD8 255 aa8.3□□□□□ -1.08
NEK3-209ENST00000618856 IMP4Q96G21 291 aaKnown RBP8.3□□□□□ -1.08
NEK3-209ENST00000618856 TEKT5Q96M29 485 aa8.3□□□□□ -1.08
NEK3-209ENST00000618856 ZNF830Q96NB3 372 aaPredicted RBP8.3□□□□□ -1.08
NEK3-209ENST00000618856 QKIQ96PU8 341 aaKnown RBP eCLIP8.3□□□□□ -1.08
NEK3-209ENST00000618856 TRIB3Q96RU7 358 aa8.3□□□□□ -1.08
NEK3-209ENST00000618856 GTPBP2Q9BX10 602 aaKnown RBP8.3□□□□□ -1.08
NEK3-209ENST00000618856 OSBPL8Q9BZF1 889 aa8.3□□□□□ -1.08
NEK3-209ENST00000618856 TSGA10Q9BZW7 698 aa8.3□□□□□ -1.08
NEK3-209ENST00000618856 SLC25A51Q9H1U9 297 aa8.3□□□□□ -1.08
NEK3-209ENST00000618856 AMFRQ9UKV5 643 aa8.3□□□□□ -1.08
NEK3-209ENST00000618856 RPL26L1Q9UNX3 145 aaKnown RBP8.3□□□□□ -1.08
NEK3-209ENST00000618856 RAI2Q9Y5P3 530 aa8.3□□□□□ -1.08
NEK3-209ENST00000618856 ANKRD36A6QL64 1941 aa8.3□□□□□ -1.08
NEK3-209ENST00000618856 ASCC3Q8N3C0 2202 aaKnown RBP8.3□□□□□ -1.08
NEK3-209ENST00000618856 NCOR2Q9Y618 2525 aa8.3□□□□□ -1.08
NEK3-209ENST00000618856 ASPMQ8IZT6 3477 aa8.3□□□□□ -1.08
NEK3-209ENST00000618856 COL5A1P20908 1838 aaPredicted RBP8.29□□□□□ -1.08
NEK3-209ENST00000618856 LRRK1Q38SD2 2015 aa8.29□□□□□ -1.08
NEK3-209ENST00000618856 TRPM6Q9BX84 2022 aa8.29□□□□□ -1.08
NEK3-209ENST00000618856 KNL1Q8NG31 2342 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms