RNA–Protein interactions for RNA: ENST00000617596.4

SNAP47-213, Transcript of synaptosome associated protein 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNAP47, Length 1,905 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-213ENST00000617596 CFAP36Q96G28 342 aa16.4■□□□□ 0.22
SNAP47-213ENST00000617596 ZDHHC6Q9H6R6 413 aa16.4■□□□□ 0.22
SNAP47-213ENST00000617596 LRRC4CQ9HCJ2 640 aa16.4■□□□□ 0.22
SNAP47-213ENST00000617596 LOC285095A0A1B0GVY8 99 aa16.39■□□□□ 0.21
SNAP47-213ENST00000617596 KLHL33A6NCF5 533 aa16.39■□□□□ 0.21
SNAP47-213ENST00000617596 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.39■□□□□ 0.21
SNAP47-213ENST00000617596 RIPK2O43353 540 aa16.39■□□□□ 0.21
SNAP47-213ENST00000617596 ASLP04424 464 aa16.39■□□□□ 0.21
SNAP47-213ENST00000617596 APODP05090 189 aa16.39■□□□□ 0.21
SNAP47-213ENST00000617596 MLNP12872 115 aa16.39■□□□□ 0.21
SNAP47-213ENST00000617596 CD72P21854 359 aa16.39■□□□□ 0.21
SNAP47-213ENST00000617596 EIF2DP41214 584 aaKnown RBP16.39■□□□□ 0.21
SNAP47-213ENST00000617596 WASP42768 502 aa16.39■□□□□ 0.21
SNAP47-213ENST00000617596 SCTRP47872 440 aa16.39■□□□□ 0.21
SNAP47-213ENST00000617596 ST8SIA6P61647 398 aa16.39■□□□□ 0.21
SNAP47-213ENST00000617596 MYLK3Q32MK0 819 aa16.39■□□□□ 0.21
SNAP47-213ENST00000617596 CARD16Q5EG05 197 aa16.39■□□□□ 0.21
SNAP47-213ENST00000617596 ARMC2Q8NEN0 867 aa16.39■□□□□ 0.21
SNAP47-213ENST00000617596 GRIN3AQ8TCU5 1115 aa16.39■□□□□ 0.21
SNAP47-213ENST00000617596 PTPRN2Q92932 1015 aa16.39■□□□□ 0.21
SNAP47-213ENST00000617596 PPP1R2P1Q96PQ5 205 aa16.39■□□□□ 0.21
SNAP47-213ENST00000617596 TRIB3Q96RU7 358 aa16.39■□□□□ 0.21
SNAP47-213ENST00000617596 CEP44Q9C0F1 390 aa16.39■□□□□ 0.21
SNAP47-213ENST00000617596 PABPC3Q9H361 631 aaKnown RBP16.39■□□□□ 0.21
SNAP47-213ENST00000617596 RABEP2Q9H5N1 569 aa16.39■□□□□ 0.21
SNAP47-213ENST00000617596 CACNA2D2Q9NY47 1150 aa16.39■□□□□ 0.21
SNAP47-213ENST00000617596 A0A0U1RQS6 177 aa16.39■□□□□ 0.21
SNAP47-213ENST00000617596 ANKRD33BA6NCL7 494 aa16.39■□□□□ 0.21
SNAP47-213ENST00000617596 CFAP73A6NFT4 308 aa16.39■□□□□ 0.21
SNAP47-213ENST00000617596 SDR42E2A6NKP2 422 aa16.39■□□□□ 0.21
SNAP47-213ENST00000617596 LOC730098B7Z3J9 87 aa16.39■□□□□ 0.21
SNAP47-213ENST00000617596 K7EQS6 105 aa16.39■□□□□ 0.21
SNAP47-213ENST00000617596 TTC4O95801 387 aa16.39■□□□□ 0.21
SNAP47-213ENST00000617596 SHBGP04278 402 aa16.39■□□□□ 0.21
SNAP47-213ENST00000617596 SRPRAP08240 638 aaKnown RBP16.39■□□□□ 0.21
SNAP47-213ENST00000617596 MYZAPP0CAP1 466 aa16.39■□□□□ 0.21
SNAP47-213ENST00000617596 IL12RB1P42701 662 aa16.39■□□□□ 0.21
SNAP47-213ENST00000617596 GPX6P59796 221 aa16.39■□□□□ 0.21
SNAP47-213ENST00000617596 EIF4HQ15056 248 aaKnown RBP16.39■□□□□ 0.21
SNAP47-213ENST00000617596 METTL3Q86U44 580 aaKnown RBP16.39■□□□□ 0.21
SNAP47-213ENST00000617596 PCDH20Q8N6Y1 951 aaKnown RBP16.39■□□□□ 0.21
SNAP47-213ENST00000617596 LPCAT1Q8NF37 534 aa16.39■□□□□ 0.21
SNAP47-213ENST00000617596 ISG20Q96AZ6 181 aaKnown RBP16.39■□□□□ 0.21
SNAP47-213ENST00000617596 ANKRD27Q96NW4 1050 aa16.39■□□□□ 0.21
SNAP47-213ENST00000617596 FRMD8Q9BZ67 464 aaPredicted RBP16.39■□□□□ 0.21
SNAP47-213ENST00000617596 CNOT10Q9H9A5 744 aaKnown RBP16.39■□□□□ 0.21
SNAP47-213ENST00000617596 PLAC1Q9HBJ0 212 aa16.39■□□□□ 0.21
SNAP47-213ENST00000617596 BFARQ9NZS9 450 aa16.39■□□□□ 0.21
SNAP47-213ENST00000617596 PCDHB9Q9Y5E1 797 aa16.39■□□□□ 0.21
SNAP47-213ENST00000617596 KIAA1549LQ6ZVL6 1849 aa16.38■□□□□ 0.21
SNAP47-213ENST00000617596 CES1P23141 567 aa16.38■□□□□ 0.21
SNAP47-213ENST00000617596 PRKCHP24723 683 aa16.38■□□□□ 0.21
SNAP47-213ENST00000617596 AP1S1P61966 158 aa16.38■□□□□ 0.21
SNAP47-213ENST00000617596 BCL2L1Q07817 233 aa16.38■□□□□ 0.21
SNAP47-213ENST00000617596 TDGQ13569 410 aa16.38■□□□□ 0.21
SNAP47-213ENST00000617596 POM121L1PQ3SYA9 428 aa16.38■□□□□ 0.21
SNAP47-213ENST00000617596 GKAP1Q5VSY0 366 aaPredicted RBP16.38■□□□□ 0.21
SNAP47-213ENST00000617596 KCTD16Q68DU8 428 aa16.38■□□□□ 0.21
SNAP47-213ENST00000617596 SERPINA13PQ6UXR4 307 aa16.38■□□□□ 0.21
SNAP47-213ENST00000617596 ZSWIM9Q86XI8 627 aa16.38■□□□□ 0.21
SNAP47-213ENST00000617596 RELL1Q8IUW5 271 aa16.38■□□□□ 0.21
SNAP47-213ENST00000617596 PALM2Q8IXS6 379 aa16.38■□□□□ 0.21
SNAP47-213ENST00000617596 CCT6BQ92526 530 aa16.38■□□□□ 0.21
SNAP47-213ENST00000617596 RMDN1Q96DB5 314 aa16.38■□□□□ 0.21
SNAP47-213ENST00000617596 SEC16BQ96JE7 1060 aa16.38■□□□□ 0.21
SNAP47-213ENST00000617596 FEM1CQ96JP0 617 aa16.38■□□□□ 0.21
SNAP47-213ENST00000617596 ZNF778Q96MU6 729 aa16.38■□□□□ 0.21
SNAP47-213ENST00000617596 EBNA1BP2Q99848 306 aaKnown RBP16.38■□□□□ 0.21
SNAP47-213ENST00000617596 VPS37BQ9H9H4 285 aa16.38■□□□□ 0.21
SNAP47-213ENST00000617596 CHRAC1Q9NRG0 131 aa16.38■□□□□ 0.21
SNAP47-213ENST00000617596 ZC3H7BQ9UGR2 993 aaKnown RBP16.38■□□□□ 0.21
SNAP47-213ENST00000617596 FAM50BQ9Y247 325 aa16.38■□□□□ 0.21
SNAP47-213ENST00000617596 CXorf51AA0A1B0GTR3 108 aa16.37■□□□□ 0.21
SNAP47-213ENST00000617596 TRAFD1O14545 582 aaPredicted RBP16.37■□□□□ 0.21
SNAP47-213ENST00000617596 TIMM44O43615 452 aa16.37■□□□□ 0.21
SNAP47-213ENST00000617596 GSRP00390 522 aa16.37■□□□□ 0.21
SNAP47-213ENST00000617596 EGFP01133 1207 aa16.37■□□□□ 0.21
SNAP47-213ENST00000617596 TIE1P35590 1138 aa16.37■□□□□ 0.21
SNAP47-213ENST00000617596 SEC24CP53992 1094 aa16.37■□□□□ 0.21
SNAP47-213ENST00000617596 TRMT10CQ7L0Y3 403 aaKnown RBP16.37■□□□□ 0.21
SNAP47-213ENST00000617596 PAF1Q8N7H5 531 aa16.37■□□□□ 0.21
SNAP47-213ENST00000617596 IL1RAPL1Q9NZN1 696 aa16.37■□□□□ 0.21
SNAP47-213ENST00000617596 PLAAQ9Y263 795 aa16.37■□□□□ 0.21
SNAP47-213ENST00000617596 UGT2B4P06133 528 aa16.37■□□□□ 0.21
SNAP47-213ENST00000617596 CTSLP07711 333 aa16.37■□□□□ 0.21
SNAP47-213ENST00000617596 PAX7P23759 505 aa16.37■□□□□ 0.21
SNAP47-213ENST00000617596 RECQLP46063 649 aaPredicted RBP16.37■□□□□ 0.21
SNAP47-213ENST00000617596 CSNK1DP48730 415 aa16.37■□□□□ 0.21
SNAP47-213ENST00000617596 SEMG2Q02383 582 aa16.37■□□□□ 0.21
SNAP47-213ENST00000617596 PUS10Q3MIT2 529 aaKnown RBP16.37■□□□□ 0.21
SNAP47-213ENST00000617596 C2orf27AQ580R0 203 aa16.37■□□□□ 0.21
SNAP47-213ENST00000617596 UNC5AQ6ZN44 842 aa16.37■□□□□ 0.21
SNAP47-213ENST00000617596 C3orf62Q6ZUJ4 267 aa16.37■□□□□ 0.21
SNAP47-213ENST00000617596 UNC5BQ8IZJ1 945 aa16.37■□□□□ 0.21
SNAP47-213ENST00000617596 BLOC1S5Q8TDH9 187 aa16.37■□□□□ 0.21
SNAP47-213ENST00000617596 STAMBPL1Q96FJ0 436 aa16.37■□□□□ 0.21
SNAP47-213ENST00000617596 PHACTR1Q9C0D0 580 aa16.37■□□□□ 0.21
SNAP47-213ENST00000617596 TMEM245Q9H330 911 aa16.37■□□□□ 0.21
SNAP47-213ENST00000617596 CENPHQ9H3R5 247 aa16.37■□□□□ 0.21
SNAP47-213ENST00000617596 ATP13A3Q9H7F0 1226 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms