RNA–Protein interactions for RNA: ENST00000613947.1

CCL4-201, Transcript of C-C motif chemokine ligand 4, humanhuman

Gene CCL4, Length 1,774 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4-201ENST00000613947 APOC4-APOC2K7ER74 178 aa12.98□□□□□ -0.33
CCL4-201ENST00000613947 KCNK1O00180 336 aa12.98□□□□□ -0.33
CCL4-201ENST00000613947 TJP3O95049 919 aa12.98□□□□□ -0.33
CCL4-201ENST00000613947 APOC2P02655 101 aa12.98□□□□□ -0.33
CCL4-201ENST00000613947 CCNB1P14635 433 aa12.98□□□□□ -0.33
CCL4-201ENST00000613947 OXTRP30559 389 aa12.98□□□□□ -0.33
CCL4-201ENST00000613947 MMP13P45452 471 aa12.98□□□□□ -0.33
CCL4-201ENST00000613947 SCNN1BP51168 640 aa12.98□□□□□ -0.33
CCL4-201ENST00000613947 RENBPP51606 427 aa12.98□□□□□ -0.33
CCL4-201ENST00000613947 RPL6Q02878 288 aaKnown RBP12.98□□□□□ -0.33
CCL4-201ENST00000613947 AP1B1Q10567 949 aa12.98□□□□□ -0.33
CCL4-201ENST00000613947 CNTN1Q12860 1018 aa12.98□□□□□ -0.33
CCL4-201ENST00000613947 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.98□□□□□ -0.33
CCL4-201ENST00000613947 BZW1Q7L1Q6 419 aaKnown RBP12.98□□□□□ -0.33
CCL4-201ENST00000613947 TMEFF1Q8IYR6 380 aa12.98□□□□□ -0.33
CCL4-201ENST00000613947 DEFB119Q8N690 84 aa12.98□□□□□ -0.33
CCL4-201ENST00000613947 TEX26Q8N6G2 289 aa12.98□□□□□ -0.33
CCL4-201ENST00000613947 SUMF1Q8NBK3 374 aa12.98□□□□□ -0.33
CCL4-201ENST00000613947 FATE1Q969F0 183 aa12.98□□□□□ -0.33
CCL4-201ENST00000613947 ARRDC3Q96B67 414 aa12.98□□□□□ -0.33
CCL4-201ENST00000613947 ZC3H10Q96K80 434 aaKnown RBP12.98□□□□□ -0.33
CCL4-201ENST00000613947 PBKQ96KB5 322 aa12.98□□□□□ -0.33
CCL4-201ENST00000613947 NSMCE3Q96MG7 304 aa12.98□□□□□ -0.33
CCL4-201ENST00000613947 EBF2Q9HAK2 575 aa12.98□□□□□ -0.33
CCL4-201ENST00000613947 RBM22Q9NW64 420 aaKnown RBP eCLIP12.98□□□□□ -0.33
CCL4-201ENST00000613947 NCKAP1Q9Y2A7 1128 aa12.98□□□□□ -0.33
CCL4-201ENST00000613947 KCNK3O14649 394 aa12.97□□□□□ -0.33
CCL4-201ENST00000613947 JCHAINP01591 159 aa12.97□□□□□ -0.33
CCL4-201ENST00000613947 UGT2B4P06133 528 aa12.97□□□□□ -0.33
CCL4-201ENST00000613947 CSNK1DP48730 415 aa12.97□□□□□ -0.33
CCL4-201ENST00000613947 EIF3BP55884 814 aaKnown RBP12.97□□□□□ -0.33
CCL4-201ENST00000613947 MAXP61244 160 aa12.97□□□□□ -0.33
CCL4-201ENST00000613947 RAD51Q06609 339 aa12.97□□□□□ -0.33
CCL4-201ENST00000613947 ZNF33AQ06730 810 aa12.97□□□□□ -0.33
CCL4-201ENST00000613947 SFSWAPQ12872 951 aaKnown RBP12.97□□□□□ -0.33
CCL4-201ENST00000613947 ITIH4Q14624 930 aa12.97□□□□□ -0.33
CCL4-201ENST00000613947 SLC36A4Q6YBV0 504 aa12.97□□□□□ -0.33
CCL4-201ENST00000613947 MAATS1Q7Z4T9 603 aa12.97□□□□□ -0.33
CCL4-201ENST00000613947 C11orf74Q86VG3 221 aa12.97□□□□□ -0.33
CCL4-201ENST00000613947 ZC3H18Q86VM9 953 aaKnown RBP12.97□□□□□ -0.33
CCL4-201ENST00000613947 BBS5Q8N3I7 341 aa12.97□□□□□ -0.33
CCL4-201ENST00000613947 ACTL9Q8TC94 416 aa12.97□□□□□ -0.33
CCL4-201ENST00000613947 IFT81Q8WYA0 676 aa12.97□□□□□ -0.33
CCL4-201ENST00000613947 RSRC1Q96IZ7 334 aaKnown RBP12.97□□□□□ -0.33
CCL4-201ENST00000613947 LRIG1Q96JA1 1093 aa12.97□□□□□ -0.33
CCL4-201ENST00000613947 MGME1Q9BQP7 344 aa12.97□□□□□ -0.33
CCL4-201ENST00000613947 GPR174Q9BXC1 333 aa12.97□□□□□ -0.33
CCL4-201ENST00000613947 CPEB1Q9BZB8 566 aaKnown RBP12.97□□□□□ -0.33
CCL4-201ENST00000613947 BTBD1Q9H0C5 482 aa12.97□□□□□ -0.33
CCL4-201ENST00000613947 BRD8Q9H0E9 1235 aa12.97□□□□□ -0.33
CCL4-201ENST00000613947 SEMA4AQ9H3S1 761 aa12.97□□□□□ -0.33
CCL4-201ENST00000613947 NT5MQ9NPB1 228 aa12.97□□□□□ -0.33
CCL4-201ENST00000613947 SMG5Q9UPR3 1016 aaKnown RBP12.97□□□□□ -0.33
CCL4-201ENST00000613947 TCRBV7S2A1N4TA0A589 114 aa12.97□□□□□ -0.33
CCL4-201ENST00000613947 PROB1E7EW31 1015 aa12.97□□□□□ -0.33
CCL4-201ENST00000613947 CCDC188H7C350 402 aa12.97□□□□□ -0.33
CCL4-201ENST00000613947 NDUFS2O75306 463 aa12.97□□□□□ -0.33
CCL4-201ENST00000613947 PIGNO95427 931 aa12.97□□□□□ -0.33
CCL4-201ENST00000613947 CR2P20023 1033 aa12.97□□□□□ -0.33
CCL4-201ENST00000613947 HSD17B3P37058 310 aa12.97□□□□□ -0.33
CCL4-201ENST00000613947 PTGER3P43115 390 aa12.97□□□□□ -0.33
CCL4-201ENST00000613947 CLNS1AP54105 237 aaKnown RBP12.97□□□□□ -0.33
CCL4-201ENST00000613947 OTUD4Q01804 1114 aaKnown RBP12.97□□□□□ -0.33
CCL4-201ENST00000613947 ZBTB17Q13105 803 aa12.97□□□□□ -0.33
CCL4-201ENST00000613947 KLF1Q13351 362 aaPredicted RBP12.97□□□□□ -0.33
CCL4-201ENST00000613947 PRKD1Q15139 912 aaPredicted RBP12.97□□□□□ -0.33
CCL4-201ENST00000613947 ZNF805Q5CZA5 627 aa12.97□□□□□ -0.33
CCL4-201ENST00000613947 AGBL4Q5VU57 503 aa12.97□□□□□ -0.33
CCL4-201ENST00000613947 PMS2CLQ68D20 193 aa12.97□□□□□ -0.33
CCL4-201ENST00000613947 GDPD4Q6W3E5 623 aa12.97□□□□□ -0.33
CCL4-201ENST00000613947 CAMK1DQ8IU85 385 aa12.97□□□□□ -0.33
CCL4-201ENST00000613947 ACTRT1Q8TDG2 376 aa12.97□□□□□ -0.33
CCL4-201ENST00000613947 TFB1MQ8WVM0 346 aaKnown RBP12.97□□□□□ -0.33
CCL4-201ENST00000613947 NKD2Q969F2 451 aaPredicted RBP12.97□□□□□ -0.33
CCL4-201ENST00000613947 FAM131CQ96AQ9 280 aa12.97□□□□□ -0.33
CCL4-201ENST00000613947 KLHL32Q96NJ5 620 aa12.97□□□□□ -0.33
CCL4-201ENST00000613947 FAM118BQ9BPY3 351 aa12.97□□□□□ -0.33
CCL4-201ENST00000613947 CARD9Q9H257 536 aa12.97□□□□□ -0.33
CCL4-201ENST00000613947 CENPHQ9H3R5 247 aa12.97□□□□□ -0.33
CCL4-201ENST00000613947 SGK2Q9HBY8 427 aa12.97□□□□□ -0.33
CCL4-201ENST00000613947 PPANQ9NQ55 473 aaKnown RBP12.97□□□□□ -0.33
CCL4-201ENST00000613947 DYRK4Q9NR20 520 aa12.97□□□□□ -0.33
CCL4-201ENST00000613947 FZD4Q9ULV1 537 aa12.97□□□□□ -0.33
CCL4-201ENST00000613947 FAM47DPA6NHR8 397 aa12.96□□□□□ -0.34
CCL4-201ENST00000613947 C16orf96A6NNT2 1141 aa12.96□□□□□ -0.34
CCL4-201ENST00000613947 RHOBTB1O94844 696 aa12.96□□□□□ -0.34
CCL4-201ENST00000613947 LMNAP02545 664 aaKnown RBP12.96□□□□□ -0.34
CCL4-201ENST00000613947 DRD4P21917 467 aa12.96□□□□□ -0.34
CCL4-201ENST00000613947 ITGB7P26010 798 aa12.96□□□□□ -0.34
CCL4-201ENST00000613947 CXCR5P32302 372 aa12.96□□□□□ -0.34
CCL4-201ENST00000613947 IFI35P80217 286 aaPredicted RBP12.96□□□□□ -0.34
CCL4-201ENST00000613947 ITKQ08881 620 aa12.96□□□□□ -0.34
CCL4-201ENST00000613947 ZNF844Q08AG5 666 aa12.96□□□□□ -0.34
CCL4-201ENST00000613947 NOMO1Q15155 1222 aa12.96□□□□□ -0.34
CCL4-201ENST00000613947 PIP5KL1Q5T9C9 394 aa12.96□□□□□ -0.34
CCL4-201ENST00000613947 ERN2Q76MJ5 926 aaKnown RBP12.96□□□□□ -0.34
CCL4-201ENST00000613947 LPCAT2Q7L5N7 544 aa12.96□□□□□ -0.34
CCL4-201ENST00000613947 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.96□□□□□ -0.34
CCL4-201ENST00000613947 CNTD1Q8N815 330 aa12.96□□□□□ -0.34
CCL4-201ENST00000613947 OR14C36Q8NHC7 312 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms