RNA–Protein interactions for RNA: ENST00000613098.4

PPARGC1A-217, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best) BASIC

Gene PPARGC1A, Length 3,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-217ENST00000613098 CLIC3O95833 236 aa7.49□□□□□ -1.21
PPARGC1A-217ENST00000613098 USP17L7P0C7H9 530 aa7.49□□□□□ -1.21
PPARGC1A-217ENST00000613098 TSPAN8P19075 237 aa7.49□□□□□ -1.21
PPARGC1A-217ENST00000613098 PLK1P53350 603 aa7.49□□□□□ -1.21
PPARGC1A-217ENST00000613098 FOXA1P55317 472 aa7.49□□□□□ -1.21
PPARGC1A-217ENST00000613098 SH3BGRP55822 239 aaPredicted RBP7.49□□□□□ -1.21
PPARGC1A-217ENST00000613098 TPI1P60174 286 aa7.49□□□□□ -1.21
PPARGC1A-217ENST00000613098 FASTKQ14296 549 aaKnown RBP7.49□□□□□ -1.21
PPARGC1A-217ENST00000613098 SLC36A3Q495N2 470 aa7.49□□□□□ -1.21
PPARGC1A-217ENST00000613098 AGKQ53H12 422 aa7.49□□□□□ -1.21
PPARGC1A-217ENST00000613098 PYCR3Q53H96 274 aa7.49□□□□□ -1.21
PPARGC1A-217ENST00000613098 PCID2Q5JVF3 399 aa7.49□□□□□ -1.21
PPARGC1A-217ENST00000613098 ERMP1Q7Z2K6 904 aa7.49□□□□□ -1.21
PPARGC1A-217ENST00000613098 FAM47BQ8NA70 645 aa7.49□□□□□ -1.21
PPARGC1A-217ENST00000613098 APPL2Q8NEU8 664 aa7.49□□□□□ -1.21
PPARGC1A-217ENST00000613098 ISOC1Q96CN7 298 aa7.49□□□□□ -1.21
PPARGC1A-217ENST00000613098 OTUD5Q96G74 571 aa7.49□□□□□ -1.21
PPARGC1A-217ENST00000613098 SCYL1Q96KG9 808 aa7.49□□□□□ -1.21
PPARGC1A-217ENST00000613098 IL12RB2Q99665 862 aa7.49□□□□□ -1.21
PPARGC1A-217ENST00000613098 CCT7Q99832 543 aa7.49□□□□□ -1.21
PPARGC1A-217ENST00000613098 NPLQ9BXD5 320 aaPredicted RBP7.49□□□□□ -1.21
PPARGC1A-217ENST00000613098 NAA50Q9GZZ1 169 aaKnown RBP7.49□□□□□ -1.21
PPARGC1A-217ENST00000613098 BRD8Q9H0E9 1235 aa7.49□□□□□ -1.21
PPARGC1A-217ENST00000613098 TUBB1Q9H4B7 451 aa7.49□□□□□ -1.21
PPARGC1A-217ENST00000613098 CAAP1Q9H8G2 361 aa7.49□□□□□ -1.21
PPARGC1A-217ENST00000613098 ELP3Q9H9T3 547 aa7.49□□□□□ -1.21
PPARGC1A-217ENST00000613098 SPAG4Q9NPE6 437 aa7.49□□□□□ -1.21
PPARGC1A-217ENST00000613098 AGPAT4Q9NRZ5 378 aa7.49□□□□□ -1.21
PPARGC1A-217ENST00000613098 PNPLA3Q9NST1 481 aa7.49□□□□□ -1.21
PPARGC1A-217ENST00000613098 CCM2LQ9NUG4 571 aaPredicted RBP7.49□□□□□ -1.21
PPARGC1A-217ENST00000613098 CDH7Q9ULB5 785 aa7.49□□□□□ -1.21
PPARGC1A-217ENST00000613098 UBQLN1Q9UMX0 589 aaKnown RBP7.49□□□□□ -1.21
PPARGC1A-217ENST00000613098 ATP6AP2A0A1C7CYW4 349 aa7.48□□□□□ -1.21
PPARGC1A-217ENST00000613098 FAM149AA5PLN7 773 aa7.48□□□□□ -1.21
PPARGC1A-217ENST00000613098 ASPDHA6ND91 283 aa7.48□□□□□ -1.21
PPARGC1A-217ENST00000613098 ZNF839A8K0R7 811 aa7.48□□□□□ -1.21
PPARGC1A-217ENST00000613098 ADM5C9JUS6 153 aa7.48□□□□□ -1.21
PPARGC1A-217ENST00000613098 ATP6AP2O75787 350 aa7.48□□□□□ -1.21
PPARGC1A-217ENST00000613098 MT-CO1P00395 513 aa7.48□□□□□ -1.21
PPARGC1A-217ENST00000613098 IGLV3-25P01717 112 aa7.48□□□□□ -1.21
PPARGC1A-217ENST00000613098 STMN1P16949 149 aa7.48□□□□□ -1.21
PPARGC1A-217ENST00000613098 SMPD1P17405 629 aa7.48□□□□□ -1.21
PPARGC1A-217ENST00000613098 CHRM3P20309 590 aa7.48□□□□□ -1.21
PPARGC1A-217ENST00000613098 CAPN3P20807 821 aa7.48□□□□□ -1.21
PPARGC1A-217ENST00000613098 ATP5F1P24539 256 aaPredicted RBP7.48□□□□□ -1.21
PPARGC1A-217ENST00000613098 SLC7A2P52569 658 aa7.48□□□□□ -1.21
PPARGC1A-217ENST00000613098 AIF1P55008 147 aa7.48□□□□□ -1.21
PPARGC1A-217ENST00000613098 SH3BP2P78314 561 aa7.48□□□□□ -1.21
PPARGC1A-217ENST00000613098 ADAM17P78536 824 aa7.48□□□□□ -1.21
PPARGC1A-217ENST00000613098 SQLEQ14534 574 aa7.48□□□□□ -1.21
PPARGC1A-217ENST00000613098 DCLRE1AQ6PJP8 1040 aa7.48□□□□□ -1.21
PPARGC1A-217ENST00000613098 LAYNQ6UX15 382 aa7.48□□□□□ -1.21
PPARGC1A-217ENST00000613098 HACD2Q6Y1H2 254 aa7.48□□□□□ -1.21
PPARGC1A-217ENST00000613098 PIWIL4Q7Z3Z4 852 aaKnown RBP7.48□□□□□ -1.21
PPARGC1A-217ENST00000613098 SULF1Q8IWU6 871 aa7.48□□□□□ -1.21
PPARGC1A-217ENST00000613098 CMTR2Q8IYT2 770 aaKnown RBP7.48□□□□□ -1.21
PPARGC1A-217ENST00000613098 C3orf58Q8NDZ4 430 aa7.48□□□□□ -1.21
PPARGC1A-217ENST00000613098 OR13J1Q8NGT2 312 aa7.48□□□□□ -1.21
PPARGC1A-217ENST00000613098 EDEM1Q92611 657 aa7.48□□□□□ -1.21
PPARGC1A-217ENST00000613098 PCED1BQ96HM7 432 aa7.48□□□□□ -1.21
PPARGC1A-217ENST00000613098 FCRL5Q96RD9 977 aa7.48□□□□□ -1.21
PPARGC1A-217ENST00000613098 RTP3Q9BQQ7 232 aa7.48□□□□□ -1.21
PPARGC1A-217ENST00000613098 TKTL2Q9H0I9 626 aa7.48□□□□□ -1.21
PPARGC1A-217ENST00000613098 ATP13A1Q9HD20 1204 aa7.48□□□□□ -1.21
PPARGC1A-217ENST00000613098 SLC38A7Q9NVC3 462 aa7.48□□□□□ -1.21
PPARGC1A-217ENST00000613098 CMTM6Q9NX76 183 aa7.48□□□□□ -1.21
PPARGC1A-217ENST00000613098 NCKIPSDQ9NZQ3 722 aa7.48□□□□□ -1.21
PPARGC1A-217ENST00000613098 FIS1Q9Y3D6 152 aa7.48□□□□□ -1.21
PPARGC1A-217ENST00000613098 TCAF1Q9Y4C2 921 aa7.48□□□□□ -1.21
PPARGC1A-217ENST00000613098 PPP2R3BQ9Y5P8 575 aa7.48□□□□□ -1.21
PPARGC1A-217ENST00000613098 TCRBV5S2A0A599 114 aa7.48□□□□□ -1.21
PPARGC1A-217ENST00000613098 TTC24A2A3L6 582 aaPredicted RBP7.48□□□□□ -1.21
PPARGC1A-217ENST00000613098 HEATR9A2RTY3 570 aa7.48□□□□□ -1.21
PPARGC1A-217ENST00000613098 C9JVG2 144 aa7.48□□□□□ -1.21
PPARGC1A-217ENST00000613098 NRP2O60462 931 aa7.48□□□□□ -1.21
PPARGC1A-217ENST00000613098 IPO13O94829 963 aaKnown RBP7.48□□□□□ -1.21
PPARGC1A-217ENST00000613098 IMPDH2P12268 514 aa7.48□□□□□ -1.21
PPARGC1A-217ENST00000613098 DARSP14868 501 aaKnown RBP7.48□□□□□ -1.21
PPARGC1A-217ENST00000613098 DESP17661 470 aa7.48□□□□□ -1.21
PPARGC1A-217ENST00000613098 MYF6P23409 242 aa7.48□□□□□ -1.21
PPARGC1A-217ENST00000613098 GJA5P36382 358 aa7.48□□□□□ -1.21
PPARGC1A-217ENST00000613098 CDKN2DP55273 166 aa7.48□□□□□ -1.21
PPARGC1A-217ENST00000613098 PMS2P3Q13401 168 aa7.48□□□□□ -1.21
PPARGC1A-217ENST00000613098 CSHL1Q14406 222 aa7.48□□□□□ -1.21
PPARGC1A-217ENST00000613098 UNC50Q53HI1 259 aa7.48□□□□□ -1.21
PPARGC1A-217ENST00000613098 MANEALQ5VSG8 457 aa7.48□□□□□ -1.21
PPARGC1A-217ENST00000613098 LPCAT2Q7L5N7 544 aa7.48□□□□□ -1.21
PPARGC1A-217ENST00000613098 ISCA2Q86U28 154 aa7.48□□□□□ -1.21
PPARGC1A-217ENST00000613098 TRIM74Q86UV6 250 aa7.48□□□□□ -1.21
PPARGC1A-217ENST00000613098 TRIM73Q86UV7 250 aa7.48□□□□□ -1.21
PPARGC1A-217ENST00000613098 SLC15A3Q8IY34 581 aa7.48□□□□□ -1.21
PPARGC1A-217ENST00000613098 HM13Q8TCT9 377 aa7.48□□□□□ -1.21
PPARGC1A-217ENST00000613098 PTERQ96BW5 349 aa7.48□□□□□ -1.21
PPARGC1A-217ENST00000613098 C12orf43Q96C57 262 aaKnown RBP7.48□□□□□ -1.21
PPARGC1A-217ENST00000613098 VAT1Q99536 393 aa7.48□□□□□ -1.21
PPARGC1A-217ENST00000613098 TBL1YQ9BQ87 522 aa7.48□□□□□ -1.21
PPARGC1A-217ENST00000613098 TRPV6Q9H1D0 765 aa7.48□□□□□ -1.21
PPARGC1A-217ENST00000613098 SNX25Q9H3E2 840 aa7.48□□□□□ -1.21
PPARGC1A-217ENST00000613098 ATXN3LQ9H3M9 355 aa7.48□□□□□ -1.21
PPARGC1A-217ENST00000613098 KCNH4Q9UQ05 1017 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms