RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 CFAP58Q5T655 872 aa17.92■□□□□ 0.46
SSBP1-215ENST00000612337 BROXQ5VW32 411 aa17.92■□□□□ 0.46
SSBP1-215ENST00000612337 KCNE4Q8WWG9 221 aa17.92■□□□□ 0.46
SSBP1-215ENST00000612337 CELF6Q96J87 481 aaKnown RBP17.92■□□□□ 0.46
SSBP1-215ENST00000612337 TUBGCP5Q96RT8 1024 aa17.92■□□□□ 0.46
SSBP1-215ENST00000612337 GPATCH2LQ9NWQ4 482 aa17.92■□□□□ 0.46
SSBP1-215ENST00000612337 PADI4Q9UM07 663 aa17.92■□□□□ 0.46
SSBP1-215ENST00000612337 PCDHGA8Q9Y5G5 932 aa17.92■□□□□ 0.46
SSBP1-215ENST00000612337 RASGRP1O95267 797 aa17.91■□□□□ 0.46
SSBP1-215ENST00000612337 CELA2BP08218 269 aaPredicted RBP17.91■□□□□ 0.46
SSBP1-215ENST00000612337 ALPIP09923 528 aa17.91■□□□□ 0.46
SSBP1-215ENST00000612337 TNFAIP3P21580 790 aa17.91■□□□□ 0.46
SSBP1-215ENST00000612337 HTR1BP28222 390 aa17.91■□□□□ 0.46
SSBP1-215ENST00000612337 RBMS1P29558 406 aaKnown RBP17.91■□□□□ 0.46
SSBP1-215ENST00000612337 MMP12P39900 470 aa17.91■□□□□ 0.46
SSBP1-215ENST00000612337 LIG3P49916 1009 aa17.91■□□□□ 0.46
SSBP1-215ENST00000612337 PAPOLAP51003 745 aaKnown RBP17.91■□□□□ 0.46
SSBP1-215ENST00000612337 TMPRSS3P57727 454 aa17.91■□□□□ 0.46
SSBP1-215ENST00000612337 C19orf57Q0VDD7 668 aa17.91■□□□□ 0.46
SSBP1-215ENST00000612337 NFATC4Q14934 902 aa17.91■□□□□ 0.46
SSBP1-215ENST00000612337 CA9Q16790 459 aa17.91■□□□□ 0.46
SSBP1-215ENST00000612337 KIF26BQ2KJY2 2108 aa17.91■□□□□ 0.46
SSBP1-215ENST00000612337 ERMARDQ5T6L9 678 aa17.91■□□□□ 0.46
SSBP1-215ENST00000612337 PLEKHA7Q6IQ23 1121 aa17.91■□□□□ 0.46
SSBP1-215ENST00000612337 LVRNQ6Q4G3 990 aa17.91■□□□□ 0.46
SSBP1-215ENST00000612337 ENPP7Q6UWV6 458 aa17.91■□□□□ 0.46
SSBP1-215ENST00000612337 CAMK1DQ8IU85 385 aa17.91■□□□□ 0.46
SSBP1-215ENST00000612337 HID1Q8IV36 788 aa17.91■□□□□ 0.46
SSBP1-215ENST00000612337 SDR16C5Q8N3Y7 309 aa17.91■□□□□ 0.46
SSBP1-215ENST00000612337 ARL10Q8N8L6 244 aa17.91■□□□□ 0.46
SSBP1-215ENST00000612337 SCG3Q8WXD2 468 aaKnown RBP17.91■□□□□ 0.46
SSBP1-215ENST00000612337 TSACCQ96A04 125 aaPredicted RBP17.91■□□□□ 0.46
SSBP1-215ENST00000612337 SLC46A1Q96NT5 459 aa17.91■□□□□ 0.46
SSBP1-215ENST00000612337 CCDC3Q9BQI4 270 aa17.91■□□□□ 0.46
SSBP1-215ENST00000612337 APOOQ9BUR5 198 aa17.91■□□□□ 0.46
SSBP1-215ENST00000612337 DPH1Q9BZG8 443 aa17.91■□□□□ 0.46
SSBP1-215ENST00000612337 EDEM3Q9BZQ6 932 aa17.91■□□□□ 0.46
SSBP1-215ENST00000612337 SLC39A8Q9C0K1 460 aa17.91■□□□□ 0.46
SSBP1-215ENST00000612337 DHX35Q9H5Z1 703 aaKnown RBP17.91■□□□□ 0.46
SSBP1-215ENST00000612337 DOLKQ9UPQ8 538 aa17.91■□□□□ 0.46
SSBP1-215ENST00000612337 ATP8A1Q9Y2Q0 1164 aa17.91■□□□□ 0.46
SSBP1-215ENST00000612337 LRP4O75096 1905 aa17.9■□□□□ 0.46
SSBP1-215ENST00000612337 CFAP69A5D8W1 941 aa17.9■□□□□ 0.46
SSBP1-215ENST00000612337 PALMO75781 387 aa17.9■□□□□ 0.46
SSBP1-215ENST00000612337 C1QL1O75973 258 aa17.9■□□□□ 0.46
SSBP1-215ENST00000612337 ATP1A3P13637 1013 aa17.9■□□□□ 0.46
SSBP1-215ENST00000612337 CTSEP14091 401 aa17.9■□□□□ 0.46
SSBP1-215ENST00000612337 SERPINA4P29622 427 aa17.9■□□□□ 0.46
SSBP1-215ENST00000612337 RGRP47804 291 aa17.9■□□□□ 0.46
SSBP1-215ENST00000612337 PDX1P52945 283 aa17.9■□□□□ 0.46
SSBP1-215ENST00000612337 INPP5AQ14642 412 aa17.9■□□□□ 0.46
SSBP1-215ENST00000612337 ALG11Q2TAA5 492 aa17.9■□□□□ 0.46
SSBP1-215ENST00000612337 AFMIDQ63HM1 303 aa17.9■□□□□ 0.46
SSBP1-215ENST00000612337 SRLQ86TD4 932 aa17.9■□□□□ 0.46
SSBP1-215ENST00000612337 ZSWIM9Q86XI8 627 aa17.9■□□□□ 0.46
SSBP1-215ENST00000612337 ARFGAP1Q8N6T3 406 aa17.9■□□□□ 0.46
SSBP1-215ENST00000612337 TSEN2Q8NCE0 465 aaKnown RBP17.9■□□□□ 0.46
SSBP1-215ENST00000612337 ATL2Q8NHH9 583 aa17.9■□□□□ 0.46
SSBP1-215ENST00000612337 PCDH19Q8TAB3 1148 aa17.9■□□□□ 0.46
SSBP1-215ENST00000612337 PRR11Q96HE9 360 aaPredicted RBP17.9■□□□□ 0.46
SSBP1-215ENST00000612337 KCTD15Q96SI1 283 aaPredicted RBP17.9■□□□□ 0.46
SSBP1-215ENST00000612337 ATP13A3Q9H7F0 1226 aa17.9■□□□□ 0.46
SSBP1-215ENST00000612337 ANKRD36A6QL64 1941 aa17.9■□□□□ 0.46
SSBP1-215ENST00000612337 TMCO5BA8MYB1 307 aa17.89■□□□□ 0.45
SSBP1-215ENST00000612337 NTN3O00634 580 aaPredicted RBP17.89■□□□□ 0.45
SSBP1-215ENST00000612337 CASC3O15234 703 aaKnown RBP17.89■□□□□ 0.45
SSBP1-215ENST00000612337 TEX33O43247 280 aa17.89■□□□□ 0.45
SSBP1-215ENST00000612337 DAPK3O43293 454 aa17.89■□□□□ 0.45
SSBP1-215ENST00000612337 ATMINO43313 823 aaPredicted RBP17.89■□□□□ 0.45
SSBP1-215ENST00000612337 SRP54P61011 504 aaKnown RBP17.89■□□□□ 0.45
SSBP1-215ENST00000612337 SKOR1P84550 965 aa17.89■□□□□ 0.45
SSBP1-215ENST00000612337 MTM1Q13496 603 aa17.89■□□□□ 0.45
SSBP1-215ENST00000612337 SPIDRQ14159 915 aa17.89■□□□□ 0.45
SSBP1-215ENST00000612337 RFX8Q6ZV50 586 aa17.89■□□□□ 0.45
SSBP1-215ENST00000612337 GKN2Q86XP6 184 aa17.89■□□□□ 0.45
SSBP1-215ENST00000612337 ARHGAP12Q8IWW6 846 aa17.89■□□□□ 0.45
SSBP1-215ENST00000612337 AOPEPQ8N6M6 819 aa17.89■□□□□ 0.45
SSBP1-215ENST00000612337 KYQ8NBH2 561 aa17.89■□□□□ 0.45
SSBP1-215ENST00000612337 WDR36Q8NI36 951 aaKnown RBP17.89■□□□□ 0.45
SSBP1-215ENST00000612337 FNIP1Q8TF40 1166 aa17.89■□□□□ 0.45
SSBP1-215ENST00000612337 ECHDC3Q96DC8 303 aa17.89■□□□□ 0.45
SSBP1-215ENST00000612337 WDR92Q96MX6 357 aa17.89■□□□□ 0.45
SSBP1-215ENST00000612337 PEBP4Q96S96 227 aa17.89■□□□□ 0.45
SSBP1-215ENST00000612337 SNRNP25Q9BV90 132 aaKnown RBP17.89■□□□□ 0.45
SSBP1-215ENST00000612337 GULP1Q9UBP9 304 aa17.89■□□□□ 0.45
SSBP1-215ENST00000612337 KLQ9UEF7 1012 aa17.89■□□□□ 0.45
SSBP1-215ENST00000612337 PCSK1NQ9UHG2 260 aa17.89■□□□□ 0.45
SSBP1-215ENST00000612337 OR1A2Q9Y585 309 aa17.89■□□□□ 0.45
SSBP1-215ENST00000612337 ZNF462Q96JM2 2506 aa17.89■□□□□ 0.45
SSBP1-215ENST00000612337 TMEM191CA6NGB0 347 aa17.88■□□□□ 0.45
SSBP1-215ENST00000612337 GOLGA6L22H0YM25 854 aa17.88■□□□□ 0.45
SSBP1-215ENST00000612337 KLK10O43240 276 aa17.88■□□□□ 0.45
SSBP1-215ENST00000612337 PRKCGP05129 697 aa17.88■□□□□ 0.45
SSBP1-215ENST00000612337 PCCBP05166 539 aa17.88■□□□□ 0.45
SSBP1-215ENST00000612337 ERCC2P18074 760 aa17.88■□□□□ 0.45
SSBP1-215ENST00000612337 MLLT3P42568 568 aaPredicted RBP17.88■□□□□ 0.45
SSBP1-215ENST00000612337 ZNF135P52742 658 aaPredicted RBP17.88■□□□□ 0.45
SSBP1-215ENST00000612337 NSUN2Q08J23 767 aaKnown RBP eCLIP17.88■□□□□ 0.45
SSBP1-215ENST00000612337 RFTN1Q14699 578 aaPredicted RBP17.88■□□□□ 0.45
SSBP1-215ENST00000612337 CCDC183Q5T5S1 534 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 370.9 ms