RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 ING2Q9H160 280 aa6.41□□□□□ -1.38
SNX13-213ENST00000611725 C1orf21Q9H246 121 aa6.41□□□□□ -1.38
SNX13-213ENST00000611725 PKD2L2Q9NZM6 624 aa6.41□□□□□ -1.38
SNX13-213ENST00000611725 FNIP2Q9P278 1114 aa6.41□□□□□ -1.38
SNX13-213ENST00000611725 DNAJB4Q9UDY4 337 aa6.41□□□□□ -1.38
SNX13-213ENST00000611725 APPL1Q9UKG1 709 aa6.41□□□□□ -1.38
SNX13-213ENST00000611725 PCDHB7Q9Y5E2 793 aa6.41□□□□□ -1.38
SNX13-213ENST00000611725 A6NHS1 94 aa6.41□□□□□ -1.38
SNX13-213ENST00000611725 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.41□□□□□ -1.38
SNX13-213ENST00000611725 TRIM38O00635 465 aa6.41□□□□□ -1.38
SNX13-213ENST00000611725 CLASP2O75122 1294 aaKnown RBP6.41□□□□□ -1.38
SNX13-213ENST00000611725 E2F6O75461 281 aa6.41□□□□□ -1.38
SNX13-213ENST00000611725 NDST3O95803 873 aa6.41□□□□□ -1.38
SNX13-213ENST00000611725 MBL2P11226 248 aaPredicted RBP6.41□□□□□ -1.38
SNX13-213ENST00000611725 PSMA4P25789 261 aaKnown RBP6.41□□□□□ -1.38
SNX13-213ENST00000611725 NFKBIAP25963 317 aa6.41□□□□□ -1.38
SNX13-213ENST00000611725 AKT1P31749 480 aa6.41□□□□□ -1.38
SNX13-213ENST00000611725 POLD2P49005 469 aa6.41□□□□□ -1.38
SNX13-213ENST00000611725 BTKQ06187 659 aa6.41□□□□□ -1.38
SNX13-213ENST00000611725 NFYCQ13952 458 aa6.41□□□□□ -1.38
SNX13-213ENST00000611725 GPR158Q5T848 1215 aa6.41□□□□□ -1.38
SNX13-213ENST00000611725 ACBD5Q5T8D3 534 aaPredicted RBP6.41□□□□□ -1.38
SNX13-213ENST00000611725 GDF6Q6KF10 455 aaPredicted RBP6.41□□□□□ -1.38
SNX13-213ENST00000611725 FRMD7Q6ZUT3 714 aa6.41□□□□□ -1.38
SNX13-213ENST00000611725 C3orf58Q8NDZ4 430 aa6.41□□□□□ -1.38
SNX13-213ENST00000611725 SLC2A6Q9UGQ3 507 aa6.41□□□□□ -1.38
SNX13-213ENST00000611725 HAS3O00219 553 aa6.41□□□□□ -1.38
SNX13-213ENST00000611725 SMAD3P84022 425 aaKnown RBP6.41□□□□□ -1.38
SNX13-213ENST00000611725 DUSP4Q13115 394 aa6.41□□□□□ -1.38
SNX13-213ENST00000611725 ANKS3Q6ZW76 656 aa6.41□□□□□ -1.38
SNX13-213ENST00000611725 UMODL1-AS1Q8N2C9 162 aa6.41□□□□□ -1.38
SNX13-213ENST00000611725 BHLHE22Q8NFJ8 381 aaPredicted RBP6.41□□□□□ -1.38
SNX13-213ENST00000611725 TRMT13Q9NUP7 481 aaKnown RBP6.41□□□□□ -1.38
SNX13-213ENST00000611725 AP4S1Q9Y587 144 aa6.41□□□□□ -1.38
SNX13-213ENST00000611725 MYH8P13535 1937 aa6.41□□□□□ -1.38
SNX13-213ENST00000611725 CA12O43570 354 aa6.41□□□□□ -1.38
SNX13-213ENST00000611725 SYNCRIPO60506 623 aaKnown RBP6.41□□□□□ -1.38
SNX13-213ENST00000611725 SNRPB2P08579 225 aaKnown RBP6.41□□□□□ -1.38
SNX13-213ENST00000611725 PEX2P28328 305 aa6.41□□□□□ -1.38
SNX13-213ENST00000611725 PRDX6P30041 224 aa6.41□□□□□ -1.38
SNX13-213ENST00000611725 FMO4P31512 558 aa6.41□□□□□ -1.38
SNX13-213ENST00000611725 OR1D2P34982 312 aa6.41□□□□□ -1.38
SNX13-213ENST00000611725 IL2P60568 153 aa6.41□□□□□ -1.38
SNX13-213ENST00000611725 IMPG1Q17R60 797 aa6.41□□□□□ -1.38
SNX13-213ENST00000611725 PARP15Q460N3 678 aa6.41□□□□□ -1.38
SNX13-213ENST00000611725 LPCAT4Q643R3 524 aa6.41□□□□□ -1.38
SNX13-213ENST00000611725 PM20D1Q6GTS8 502 aa6.41□□□□□ -1.38
SNX13-213ENST00000611725 ANO7Q6IWH7 933 aa6.41□□□□□ -1.38
SNX13-213ENST00000611725 FAM45BPQ6NSW5 357 aa6.41□□□□□ -1.38
SNX13-213ENST00000611725 FBXO27Q8NI29 283 aa6.41□□□□□ -1.38
SNX13-213ENST00000611725 FAM45AQ8TCE6 357 aa6.41□□□□□ -1.38
SNX13-213ENST00000611725 AFF4Q9UHB7 1163 aaKnown RBP6.41□□□□□ -1.38
SNX13-213ENST00000611725 HS3ST4Q9Y661 456 aa6.41□□□□□ -1.38
SNX13-213ENST00000611725 XIRP1Q702N8 1843 aaKnown RBP6.41□□□□□ -1.38
SNX13-213ENST00000611725 HMX2A2RU54 273 aa6.41□□□□□ -1.38
SNX13-213ENST00000611725 CFAP99D6REC4 459 aa6.41□□□□□ -1.38
SNX13-213ENST00000611725 CLDN11O75508 207 aa6.41□□□□□ -1.38
SNX13-213ENST00000611725 SP3Q02447 781 aa6.41□□□□□ -1.38
SNX13-213ENST00000611725 LBRQ14739 615 aaKnown RBP6.41□□□□□ -1.38
SNX13-213ENST00000611725 TTLL9Q3SXZ7 439 aa6.41□□□□□ -1.38
SNX13-213ENST00000611725 TIGD2Q4W5G0 525 aa6.41□□□□□ -1.38
SNX13-213ENST00000611725 SLC9B1Q4ZJI4 515 aa6.41□□□□□ -1.38
SNX13-213ENST00000611725 PGAM4Q8N0Y7 254 aa6.41□□□□□ -1.38
SNX13-213ENST00000611725 OR4L1Q8NH43 312 aa6.41□□□□□ -1.38
SNX13-213ENST00000611725 ACTRT2Q8TDY3 377 aa6.41□□□□□ -1.38
SNX13-213ENST00000611725 MRPS31Q92665 395 aaKnown RBP6.41□□□□□ -1.38
SNX13-213ENST00000611725 DNAJC1Q96KC8 554 aaKnown RBP6.41□□□□□ -1.38
SNX13-213ENST00000611725 CDK5RAP1Q96SZ6 601 aaKnown RBP6.41□□□□□ -1.38
SNX13-213ENST00000611725 CCT7Q99832 543 aa6.41□□□□□ -1.38
SNX13-213ENST00000611725 ZCWPW1Q9H0M4 648 aa6.41□□□□□ -1.38
SNX13-213ENST00000611725 SPAG4Q9NPE6 437 aa6.41□□□□□ -1.38
SNX13-213ENST00000611725 ANLNQ9NQW6 1124 aa6.41□□□□□ -1.38
SNX13-213ENST00000611725 PPM1HQ9ULR3 514 aa6.41□□□□□ -1.38
SNX13-213ENST00000611725 SLX4Q8IY92 1834 aa6.4□□□□□ -1.38
SNX13-213ENST00000611725 KANSL1LA0AUZ9 987 aa6.4□□□□□ -1.38
SNX13-213ENST00000611725 HSPA1AP0DMV8 641 aaKnown RBP6.4□□□□□ -1.38
SNX13-213ENST00000611725 HSPA1BP0DMV9 641 aaKnown RBP6.4□□□□□ -1.38
SNX13-213ENST00000611725 ZNF7P17097 686 aaPredicted RBP6.4□□□□□ -1.38
SNX13-213ENST00000611725 MAGEA3P43357 314 aa6.4□□□□□ -1.38
SNX13-213ENST00000611725 NDST2P52849 883 aa6.4□□□□□ -1.38
SNX13-213ENST00000611725 ATP6AP1LQ52LC2 224 aa6.4□□□□□ -1.38
SNX13-213ENST00000611725 ADGRG6Q86SQ4 1221 aa6.4□□□□□ -1.38
SNX13-213ENST00000611725 FAM126BQ8IXS8 530 aa6.4□□□□□ -1.38
SNX13-213ENST00000611725 OR7D4Q8NG98 312 aa6.4□□□□□ -1.38
SNX13-213ENST00000611725 TTPALQ9BTX7 342 aa6.4□□□□□ -1.38
SNX13-213ENST00000611725 CATSPERZQ9NTU4 200 aa6.4□□□□□ -1.38
SNX13-213ENST00000611725 TMEM161AQ9NX61 479 aa6.4□□□□□ -1.38
SNX13-213ENST00000611725 AGO1Q9UL18 857 aaKnown RBP6.4□□□□□ -1.38
SNX13-213ENST00000611725 SYN3O14994 580 aa6.4□□□□□ -1.38
SNX13-213ENST00000611725 NRP2O60462 931 aa6.4□□□□□ -1.38
SNX13-213ENST00000611725 CNTN5O94779 1100 aa6.4□□□□□ -1.38
SNX13-213ENST00000611725 TRIM16O95361 564 aa6.4□□□□□ -1.38
SNX13-213ENST00000611725 CYBBP04839 570 aa6.4□□□□□ -1.38
SNX13-213ENST00000611725 FESP07332 822 aa6.4□□□□□ -1.38
SNX13-213ENST00000611725 FAM58BPP0C7Q3 252 aa6.4□□□□□ -1.38
SNX13-213ENST00000611725 SLC35E2BP0CK96 405 aa6.4□□□□□ -1.38
SNX13-213ENST00000611725 TACR2P21452 398 aa6.4□□□□□ -1.38
SNX13-213ENST00000611725 ACLYP53396 1101 aa6.4□□□□□ -1.38
SNX13-213ENST00000611725 NIPAL4Q0D2K0 466 aa6.4□□□□□ -1.38
SNX13-213ENST00000611725 SQLEQ14534 574 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms