RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 RNF14Q9UBS8 474 aa22■■□□□ 1.11
CBWD3-207ENST00000611426 CNOT8Q9UFF9 292 aaKnown RBP22■■□□□ 1.11
CBWD3-207ENST00000611426 GGT7Q9UJ14 662 aa22■■□□□ 1.11
CBWD3-207ENST00000611426 ITM2BQ9Y287 266 aa22■■□□□ 1.11
CBWD3-207ENST00000611426 SPTY2D1-AS1A0A0U1RR47 76 aa21.99■■□□□ 1.11
CBWD3-207ENST00000611426 IGSF6O95976 241 aa21.99■■□□□ 1.11
CBWD3-207ENST00000611426 GIMD1P0DJR0 217 aa21.99■■□□□ 1.11
CBWD3-207ENST00000611426 TUBB4BP68371 445 aa21.99■■□□□ 1.11
CBWD3-207ENST00000611426 INSM1Q01101 510 aaPredicted RBP21.99■■□□□ 1.11
CBWD3-207ENST00000611426 FZD2Q14332 565 aa21.99■■□□□ 1.11
CBWD3-207ENST00000611426 INO80DQ53TQ3 878 aaPredicted RBP21.99■■□□□ 1.11
CBWD3-207ENST00000611426 NT5DC3Q86UY8 548 aa21.99■■□□□ 1.11
CBWD3-207ENST00000611426 NETO2Q8NC67 525 aa21.99■■□□□ 1.11
CBWD3-207ENST00000611426 ZNF564Q8TBZ8 553 aaPredicted RBP21.99■■□□□ 1.11
CBWD3-207ENST00000611426 ASB12Q8WXK4 309 aa21.99■■□□□ 1.11
CBWD3-207ENST00000611426 VOPP1Q96AW1 172 aa21.99■■□□□ 1.11
CBWD3-207ENST00000611426 HMCESQ96FZ2 354 aa21.99■■□□□ 1.11
CBWD3-207ENST00000611426 OSBPL9Q96SU4 736 aa21.99■■□□□ 1.11
CBWD3-207ENST00000611426 NUP85Q9BW27 656 aa21.99■■□□□ 1.11
CBWD3-207ENST00000611426 KLC2Q9H0B6 622 aa21.99■■□□□ 1.11
CBWD3-207ENST00000611426 GPR27Q9NS67 375 aa21.99■■□□□ 1.11
CBWD3-207ENST00000611426 NLGN3Q9NZ94 848 aa21.99■■□□□ 1.11
CBWD3-207ENST00000611426 LCMT1Q9UIC8 334 aa21.99■■□□□ 1.11
CBWD3-207ENST00000611426 CLCA2Q9UQC9 943 aa21.99■■□□□ 1.11
CBWD3-207ENST00000611426 SCINQ9Y6U3 715 aa21.99■■□□□ 1.11
CBWD3-207ENST00000611426 WASH4PA8MWX3 477 aa21.99■■□□□ 1.11
CBWD3-207ENST00000611426 RASA4BC9J798 803 aa21.99■■□□□ 1.11
CBWD3-207ENST00000611426 SCAMP1O15126 338 aa21.99■■□□□ 1.11
CBWD3-207ENST00000611426 RASA4O43374 803 aa21.99■■□□□ 1.11
CBWD3-207ENST00000611426 CSF2P04141 144 aa21.99■■□□□ 1.11
CBWD3-207ENST00000611426 RHOAP61586 193 aa21.99■■□□□ 1.11
CBWD3-207ENST00000611426 PDE1CQ14123 709 aaPredicted RBP21.99■■□□□ 1.11
CBWD3-207ENST00000611426 PARP15Q460N3 678 aa21.99■■□□□ 1.11
CBWD3-207ENST00000611426 PDZD3Q86UT5 571 aa21.99■■□□□ 1.11
CBWD3-207ENST00000611426 CACTIN-AS1Q8N1I8 211 aa21.99■■□□□ 1.11
CBWD3-207ENST00000611426 HES6Q96HZ4 224 aa21.99■■□□□ 1.11
CBWD3-207ENST00000611426 NRSN2Q9GZP1 204 aa21.99■■□□□ 1.11
CBWD3-207ENST00000611426 UQCRHLA0A096LP55 91 aa21.98■■□□□ 1.11
CBWD3-207ENST00000611426 H3BM21 787 aa21.98■■□□□ 1.11
CBWD3-207ENST00000611426 FGF10O15520 208 aaPredicted RBP21.98■■□□□ 1.11
CBWD3-207ENST00000611426 FTCDO95954 541 aa21.98■■□□□ 1.11
CBWD3-207ENST00000611426 UQCRHP07919 91 aa21.98■■□□□ 1.11
CBWD3-207ENST00000611426 CKMT1AP12532 417 aa21.98■■□□□ 1.11
CBWD3-207ENST00000611426 HOXB3P14651 431 aaPredicted RBP21.98■■□□□ 1.11
CBWD3-207ENST00000611426 OGDHQ02218 1023 aa21.98■■□□□ 1.11
CBWD3-207ENST00000611426 SEMG2Q02383 582 aa21.98■■□□□ 1.11
CBWD3-207ENST00000611426 SERINC3Q13530 473 aa21.98■■□□□ 1.11
CBWD3-207ENST00000611426 LRRC73Q5JTD7 316 aa21.98■■□□□ 1.11
CBWD3-207ENST00000611426 PEX26Q7Z412 305 aa21.98■■□□□ 1.11
CBWD3-207ENST00000611426 DAAM2Q86T65 1068 aa21.98■■□□□ 1.11
CBWD3-207ENST00000611426 PARGQ86W56 976 aa21.98■■□□□ 1.11
CBWD3-207ENST00000611426 UMODL1-AS1Q8N2C9 162 aa21.98■■□□□ 1.11
CBWD3-207ENST00000611426 DENND6BQ8NEG7 585 aa21.98■■□□□ 1.11
CBWD3-207ENST00000611426 APOLD1Q96LR9 279 aa21.98■■□□□ 1.11
CBWD3-207ENST00000611426 DUSP23Q9BVJ7 150 aa21.98■■□□□ 1.11
CBWD3-207ENST00000611426 CARD6Q9BX69 1037 aa21.98■■□□□ 1.11
CBWD3-207ENST00000611426 MRPL47Q9HD33 250 aaKnown RBP21.98■■□□□ 1.11
CBWD3-207ENST00000611426 A0A087WV48 116 aa21.97■■□□□ 1.11
CBWD3-207ENST00000611426 EFCAB8A8MWE9 144 aa21.97■■□□□ 1.11
CBWD3-207ENST00000611426 K7ESM1 405 aa21.97■■□□□ 1.11
CBWD3-207ENST00000611426 AREL1O15033 823 aa21.97■■□□□ 1.11
CBWD3-207ENST00000611426 SPINT1O43278 529 aa21.97■■□□□ 1.11
CBWD3-207ENST00000611426 NEBLO76041 1014 aa21.97■■□□□ 1.11
CBWD3-207ENST00000611426 NME1P15531 152 aaKnown RBP21.97■■□□□ 1.11
CBWD3-207ENST00000611426 CKAP4Q07065 602 aaKnown RBP21.97■■□□□ 1.11
CBWD3-207ENST00000611426 MAMLD1Q13495 774 aa21.97■■□□□ 1.11
CBWD3-207ENST00000611426 RPS6KA1Q15418 735 aa21.97■■□□□ 1.11
CBWD3-207ENST00000611426 DCBLD1Q8N8Z6 715 aa21.97■■□□□ 1.11
CBWD3-207ENST00000611426 MNS1Q8NEH6 495 aa21.97■■□□□ 1.11
CBWD3-207ENST00000611426 DCBLD2Q96PD2 775 aa21.97■■□□□ 1.11
CBWD3-207ENST00000611426 PARVAQ9NVD7 372 aa21.97■■□□□ 1.11
CBWD3-207ENST00000611426 DONSONQ9NYP3 566 aa21.97■■□□□ 1.11
CBWD3-207ENST00000611426 AMFRQ9UKV5 643 aa21.97■■□□□ 1.11
CBWD3-207ENST00000611426 MFHAS1Q9Y4C4 1052 aa21.97■■□□□ 1.11
CBWD3-207ENST00000611426 ATRXP46100 2492 aa21.96■■□□□ 1.11
CBWD3-207ENST00000611426 MIF4GDA9UHW6 222 aaKnown RBP21.96■■□□□ 1.11
CBWD3-207ENST00000611426 MMP20O60882 483 aa21.96■■□□□ 1.11
CBWD3-207ENST00000611426 MT-CO3P00414 261 aa21.96■■□□□ 1.11
CBWD3-207ENST00000611426 MYF5P13349 255 aa21.96■■□□□ 1.11
CBWD3-207ENST00000611426 PSMA2P25787 234 aa21.96■■□□□ 1.11
CBWD3-207ENST00000611426 TPI1P60174 286 aa21.96■■□□□ 1.11
CBWD3-207ENST00000611426 PFN3P60673 137 aa21.96■■□□□ 1.11
CBWD3-207ENST00000611426 RTP5Q14D33 572 aa21.96■■□□□ 1.11
CBWD3-207ENST00000611426 CYTH1Q15438 398 aa21.96■■□□□ 1.11
CBWD3-207ENST00000611426 CREG2Q8IUH2 290 aa21.96■■□□□ 1.11
CBWD3-207ENST00000611426 ZNF548Q8NEK5 533 aaPredicted RBP21.96■■□□□ 1.11
CBWD3-207ENST00000611426 CXorf40AQ8TE69 158 aa21.96■■□□□ 1.11
CBWD3-207ENST00000611426 CENPTQ96BT3 561 aa21.96■■□□□ 1.11
CBWD3-207ENST00000611426 EVA1BQ9NVM1 165 aa21.96■■□□□ 1.11
CBWD3-207ENST00000611426 UBA2Q9UBT2 640 aaPredicted RBP21.96■■□□□ 1.11
CBWD3-207ENST00000611426 KLF15Q9UIH9 416 aa21.96■■□□□ 1.11
CBWD3-207ENST00000611426 ATMINO43313 823 aaPredicted RBP21.95■■□□□ 1.1
CBWD3-207ENST00000611426 TM7SF2O76062 418 aa21.95■■□□□ 1.1
CBWD3-207ENST00000611426 TIMP2P16035 220 aa21.95■■□□□ 1.1
CBWD3-207ENST00000611426 JUNDP17535 347 aa21.95■■□□□ 1.1
CBWD3-207ENST00000611426 ITIH2P19823 946 aa21.95■■□□□ 1.1
CBWD3-207ENST00000611426 XPAP23025 273 aaPredicted RBP21.95■■□□□ 1.1
CBWD3-207ENST00000611426 HTR7P34969 479 aa21.95■■□□□ 1.1
CBWD3-207ENST00000611426 DUSP3P51452 185 aaPredicted RBP21.95■■□□□ 1.1
CBWD3-207ENST00000611426 THOP1P52888 689 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms