RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 NTRK3Q16288 839 aa13.14□□□□□ -0.31
USP6NL-205ENST00000609104 FRMD6Q96NE9 622 aa13.14□□□□□ -0.31
USP6NL-205ENST00000609104 PNPLA3Q9NST1 481 aa13.14□□□□□ -0.31
USP6NL-205ENST00000609104 RGL2O15211 777 aa13.14□□□□□ -0.31
USP6NL-205ENST00000609104 NKRFO15226 690 aaKnown RBP eCLIP13.14□□□□□ -0.31
USP6NL-205ENST00000609104 CATP04040 527 aaKnown RBP13.14□□□□□ -0.31
USP6NL-205ENST00000609104 MTHFRP42898 656 aa13.14□□□□□ -0.31
USP6NL-205ENST00000609104 AUHQ13825 339 aaKnown RBP13.14□□□□□ -0.31
USP6NL-205ENST00000609104 RAET1GQ6H3X3 334 aa13.14□□□□□ -0.31
USP6NL-205ENST00000609104 SENP8Q96LD8 212 aa13.14□□□□□ -0.31
USP6NL-205ENST00000609104 FAIM2Q9BWQ8 316 aa13.14□□□□□ -0.31
USP6NL-205ENST00000609104 CDADC1Q9BWV3 514 aa13.14□□□□□ -0.31
USP6NL-205ENST00000609104 TMPRSS4Q9NRS4 437 aa13.14□□□□□ -0.31
USP6NL-205ENST00000609104 TMEM51Q9NW97 253 aa13.14□□□□□ -0.31
USP6NL-205ENST00000609104 PCYOX1Q9UHG3 505 aa13.14□□□□□ -0.31
USP6NL-205ENST00000609104 IRAK3Q9Y616 596 aa13.14□□□□□ -0.31
USP6NL-205ENST00000609104 PCP4L1A6NKN8 68 aa13.14□□□□□ -0.31
USP6NL-205ENST00000609104 CASKO14936 926 aa13.14□□□□□ -0.31
USP6NL-205ENST00000609104 RECQL4O94761 1208 aa13.14□□□□□ -0.31
USP6NL-205ENST00000609104 DPF3Q92784 378 aa13.14□□□□□ -0.31
USP6NL-205ENST00000609104 FERD3LQ96RJ6 166 aa13.14□□□□□ -0.31
USP6NL-205ENST00000609104 AK5Q9Y6K8 562 aa13.14□□□□□ -0.31
USP6NL-205ENST00000609104 DDTLA6NHG4 134 aaPredicted RBP13.14□□□□□ -0.31
USP6NL-205ENST00000609104 SCAMP3O14828 347 aaKnown RBP13.14□□□□□ -0.31
USP6NL-205ENST00000609104 ULK1O75385 1050 aa13.14□□□□□ -0.31
USP6NL-205ENST00000609104 PDHA2P29803 388 aa13.14□□□□□ -0.31
USP6NL-205ENST00000609104 PALB2Q86YC2 1186 aa13.14□□□□□ -0.31
USP6NL-205ENST00000609104 DENND1CQ8IV53 801 aa13.14□□□□□ -0.31
USP6NL-205ENST00000609104 SFRP1Q8N474 314 aa13.14□□□□□ -0.31
USP6NL-205ENST00000609104 TM6SF2Q9BZW4 377 aa13.14□□□□□ -0.31
USP6NL-205ENST00000609104 ASB7Q9H672 318 aa13.14□□□□□ -0.31
USP6NL-205ENST00000609104 EME2A4GXA9 379 aaPredicted RBP13.14□□□□□ -0.31
USP6NL-205ENST00000609104 TISP43B9A030 160 aa13.14□□□□□ -0.31
USP6NL-205ENST00000609104 FADS2O95864 444 aaKnown RBP13.14□□□□□ -0.31
USP6NL-205ENST00000609104 ELAVL2Q12926 359 aaKnown RBP13.14□□□□□ -0.31
USP6NL-205ENST00000609104 NEK5Q6P3R8 708 aa13.14□□□□□ -0.31
USP6NL-205ENST00000609104 SLC34A3Q8N130 599 aa13.14□□□□□ -0.31
USP6NL-205ENST00000609104 WDR12Q9GZL7 423 aaKnown RBP13.14□□□□□ -0.31
USP6NL-205ENST00000609104 DPP7Q9UHL4 492 aa13.14□□□□□ -0.31
USP6NL-205ENST00000609104 OR10H1Q9Y4A9 318 aa13.14□□□□□ -0.31
USP6NL-205ENST00000609104 FGF10O15520 208 aaPredicted RBP13.13□□□□□ -0.31
USP6NL-205ENST00000609104 CLK3P49761 638 aaKnown RBP13.13□□□□□ -0.31
USP6NL-205ENST00000609104 RPS6KA3P51812 740 aa13.13□□□□□ -0.31
USP6NL-205ENST00000609104 EML1O00423 815 aa13.13□□□□□ -0.31
USP6NL-205ENST00000609104 TBL1XO60907 577 aa13.13□□□□□ -0.31
USP6NL-205ENST00000609104 CLCN5P51795 746 aa13.13□□□□□ -0.31
USP6NL-205ENST00000609104 SNRPD1P62314 119 aaKnown RBP13.13□□□□□ -0.31
USP6NL-205ENST00000609104 MEIOBQ8N635 442 aa13.13□□□□□ -0.31
USP6NL-205ENST00000609104 ZFP28Q8NHY6 868 aa13.13□□□□□ -0.31
USP6NL-205ENST00000609104 PIH1D2Q8WWB5 315 aa13.13□□□□□ -0.31
USP6NL-205ENST00000609104 ZNF879B4DU55 563 aa13.13□□□□□ -0.31
USP6NL-205ENST00000609104 TNFRSF8P28908 595 aa13.13□□□□□ -0.31
USP6NL-205ENST00000609104 FSTL1Q12841 308 aa13.13□□□□□ -0.31
USP6NL-205ENST00000609104 ZC3H12AQ5D1E8 599 aaKnown RBP13.13□□□□□ -0.31
USP6NL-205ENST00000609104 ZNF248Q8NDW4 579 aa13.13□□□□□ -0.31
USP6NL-205ENST00000609104 UBE2E3Q969T4 207 aa13.13□□□□□ -0.31
USP6NL-205ENST00000609104 SLCO1B3Q9NPD5 702 aa13.13□□□□□ -0.31
USP6NL-205ENST00000609104 RPLP2P05387 115 aaKnown RBP13.13□□□□□ -0.31
USP6NL-205ENST00000609104 CTBP1Q13363 440 aa13.13□□□□□ -0.31
USP6NL-205ENST00000609104 KCNA10Q16322 511 aa13.13□□□□□ -0.31
USP6NL-205ENST00000609104 ARMCX6Q7L4S7 300 aa13.13□□□□□ -0.31
USP6NL-205ENST00000609104 SALL1Q9NSC2 1324 aa13.13□□□□□ -0.31
USP6NL-205ENST00000609104 TIPRLO75663 272 aa13.13□□□□□ -0.31
USP6NL-205ENST00000609104 PGK1P00558 417 aa13.13□□□□□ -0.31
USP6NL-205ENST00000609104 PIRTP0C851 137 aa13.13□□□□□ -0.31
USP6NL-205ENST00000609104 THOP1P52888 689 aa13.13□□□□□ -0.31
USP6NL-205ENST00000609104 MADCAM1Q13477 382 aa13.13□□□□□ -0.31
USP6NL-205ENST00000609104 ADGRA1Q86SQ6 560 aa13.13□□□□□ -0.31
USP6NL-205ENST00000609104 NEK7Q8TDX7 302 aa13.13□□□□□ -0.31
USP6NL-205ENST00000609104 PTCD2Q8WV60 388 aaKnown RBP13.13□□□□□ -0.31
USP6NL-205ENST00000609104 IL17RBQ9NRM6 502 aa13.13□□□□□ -0.31
USP6NL-205ENST00000609104 GGA2Q9UJY4 613 aa13.13□□□□□ -0.31
USP6NL-205ENST00000609104 ITGB1BP2Q9UKP3 347 aa13.13□□□□□ -0.31
USP6NL-205ENST00000609104 ERN1O75460 977 aaKnown RBP13.13□□□□□ -0.31
USP6NL-205ENST00000609104 GRB14Q14449 540 aa13.13□□□□□ -0.31
USP6NL-205ENST00000609104 LYPLAL1Q5VWZ2 237 aa13.13□□□□□ -0.31
USP6NL-205ENST00000609104 BHLHB9Q6PI77 547 aa13.13□□□□□ -0.31
USP6NL-205ENST00000609104 SLCO6A1Q86UG4 719 aa13.13□□□□□ -0.31
USP6NL-205ENST00000609104 SUSD6Q92537 303 aa13.13□□□□□ -0.31
USP6NL-205ENST00000609104 GSDMCQ9BYG8 508 aa13.13□□□□□ -0.31
USP6NL-205ENST00000609104 DGKBQ9Y6T7 804 aa13.13□□□□□ -0.31
USP6NL-205ENST00000609104 GLRA2P23416 452 aa13.13□□□□□ -0.31
USP6NL-205ENST00000609104 RPL22P35268 128 aaKnown RBP13.13□□□□□ -0.31
USP6NL-205ENST00000609104 ROR2Q01974 943 aaKnown RBP13.13□□□□□ -0.31
USP6NL-205ENST00000609104 BST1Q10588 318 aa13.13□□□□□ -0.31
USP6NL-205ENST00000609104 SEMA5AQ13591 1074 aa13.13□□□□□ -0.31
USP6NL-205ENST00000609104 LPCAT4Q643R3 524 aa13.13□□□□□ -0.31
USP6NL-205ENST00000609104 AFTPHQ6ULP2 937 aa13.13□□□□□ -0.31
USP6NL-205ENST00000609104 PWWP2AQ96N64 755 aa13.13□□□□□ -0.31
USP6NL-205ENST00000609104 CCDC59Q9P031 241 aaKnown RBP13.13□□□□□ -0.31
USP6NL-205ENST00000609104 C2orf71A6NGG8 1288 aa13.13□□□□□ -0.31
USP6NL-205ENST00000609104 PPP1R26Q5T8A7 1209 aaPredicted RBP13.13□□□□□ -0.31
USP6NL-205ENST00000609104 PARGQ86W56 976 aa13.13□□□□□ -0.31
USP6NL-205ENST00000609104 WNT8BQ93098 351 aa13.13□□□□□ -0.31
USP6NL-205ENST00000609104 ADARB2Q9NS39 739 aaKnown RBP13.13□□□□□ -0.31
USP6NL-205ENST00000609104 PSMD13Q9UNM6 376 aa13.13□□□□□ -0.31
USP6NL-205ENST00000609104 AP4B1Q9Y6B7 739 aa13.13□□□□□ -0.31
USP6NL-205ENST00000609104 ACKR2O00590 384 aa13.13□□□□□ -0.31
USP6NL-205ENST00000609104 NRP2O60462 931 aa13.13□□□□□ -0.31
USP6NL-205ENST00000609104 CXCR2P25025 360 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms