RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 CBR4Q8N4T8 237 aa22.5■■□□□ 1.19
SHANK2-220ENST00000608988 MINDY1Q8N5J2 469 aa22.5■■□□□ 1.19
SHANK2-220ENST00000608988 TOP6BLQ8N6T0 577 aa22.5■■□□□ 1.19
SHANK2-220ENST00000608988 CXorf21Q9HAI6 301 aa22.5■■□□□ 1.19
SHANK2-220ENST00000608988 CDHR5Q9HBB8 845 aa22.5■■□□□ 1.19
SHANK2-220ENST00000608988 PDCD11Q14690 1871 aaKnown RBP22.5■■□□□ 1.19
SHANK2-220ENST00000608988 A8MT66 165 aa22.49■■□□□ 1.19
SHANK2-220ENST00000608988 DLGAP1O14490 977 aa22.49■■□□□ 1.19
SHANK2-220ENST00000608988 MAGEB3O15480 346 aa22.49■■□□□ 1.19
SHANK2-220ENST00000608988 CNMDO75829 334 aa22.49■■□□□ 1.19
SHANK2-220ENST00000608988 GPIP06744 558 aa22.49■■□□□ 1.19
SHANK2-220ENST00000608988 LTA4HP09960 611 aaKnown RBP22.49■■□□□ 1.19
SHANK2-220ENST00000608988 HNRNPLP14866 589 aaKnown RBP eCLIP22.49■■□□□ 1.195e-7■■■■■ 43.5
SHANK2-220ENST00000608988 PORP16435 677 aaPredicted RBP22.49■■□□□ 1.19
SHANK2-220ENST00000608988 NELFEP18615 380 aaKnown RBP22.49■■□□□ 1.19
SHANK2-220ENST00000608988 ATP6V1B2P21281 511 aa22.49■■□□□ 1.19
SHANK2-220ENST00000608988 CLCN5P51795 746 aa22.49■■□□□ 1.19
SHANK2-220ENST00000608988 GEMP55040 296 aa22.49■■□□□ 1.19
SHANK2-220ENST00000608988 C1QTNF8P60827 252 aa22.49■■□□□ 1.19
SHANK2-220ENST00000608988 CCNA1P78396 465 aa22.49■■□□□ 1.19
SHANK2-220ENST00000608988 CDC42EP1Q00587 391 aa22.49■■□□□ 1.19
SHANK2-220ENST00000608988 CBX3Q13185 183 aa22.49■■□□□ 1.19
SHANK2-220ENST00000608988 KCTD2Q14681 263 aa22.49■■□□□ 1.19
SHANK2-220ENST00000608988 SLC14A2Q15849 920 aa22.49■■□□□ 1.19
SHANK2-220ENST00000608988 PDCD4Q53EL6 469 aaKnown RBP22.49■■□□□ 1.19
SHANK2-220ENST00000608988 ABRAXAS1Q6UWZ7 409 aa22.49■■□□□ 1.19
SHANK2-220ENST00000608988 LYSMD3Q7Z3D4 306 aa22.49■■□□□ 1.19
SHANK2-220ENST00000608988 NDRG1Q92597 394 aaKnown RBP22.49■■□□□ 1.19
SHANK2-220ENST00000608988 THAP11Q96EK4 314 aa22.49■■□□□ 1.19
SHANK2-220ENST00000608988 PHF12Q96QT6 1004 aa22.49■■□□□ 1.19
SHANK2-220ENST00000608988 ACTR3BQ9P1U1 418 aa22.49■■□□□ 1.19
SHANK2-220ENST00000608988 TRAF6Q9Y4K3 522 aa22.49■■□□□ 1.19
SHANK2-220ENST00000608988 NRCAMQ92823 1304 aa22.49■■□□□ 1.19
SHANK2-220ENST00000608988 ASB14A6NK59 587 aa22.49■■□□□ 1.19
SHANK2-220ENST00000608988 SNAP91O60641 907 aa22.49■■□□□ 1.19
SHANK2-220ENST00000608988 PEX10O60683 326 aa22.49■■□□□ 1.19
SHANK2-220ENST00000608988 HUS1O60921 280 aa22.49■■□□□ 1.19
SHANK2-220ENST00000608988 ATP6V1G1O75348 118 aa22.49■■□□□ 1.19
SHANK2-220ENST00000608988 CPB1P15086 417 aa22.49■■□□□ 1.19
SHANK2-220ENST00000608988 SLC26A3P40879 764 aa22.49■■□□□ 1.19
SHANK2-220ENST00000608988 GRIA3P42263 894 aa22.49■■□□□ 1.19
SHANK2-220ENST00000608988 SLC1A2P43004 574 aa22.49■■□□□ 1.19
SHANK2-220ENST00000608988 GRSF1Q12849 480 aaKnown RBP eCLIP22.49■■□□□ 1.192e-6■■■■□ 25
SHANK2-220ENST00000608988 ACAP2Q15057 778 aa22.49■■□□□ 1.19
SHANK2-220ENST00000608988 GALNT7Q86SF2 657 aa22.49■■□□□ 1.19
SHANK2-220ENST00000608988 DENND6AQ8IWF6 608 aa22.49■■□□□ 1.19
SHANK2-220ENST00000608988 CALML6Q8TD86 181 aa22.49■■□□□ 1.19
SHANK2-220ENST00000608988 GIPC3Q8TF64 312 aa22.49■■□□□ 1.19
SHANK2-220ENST00000608988 ASB2Q96Q27 587 aa22.49■■□□□ 1.19
SHANK2-220ENST00000608988 CCDC68Q9H2F9 335 aa22.49■■□□□ 1.19
SHANK2-220ENST00000608988 RPF2Q9H7B2 306 aaKnown RBP22.49■■□□□ 1.19
SHANK2-220ENST00000608988 PAIP2BQ9ULR5 123 aaKnown RBP22.49■■□□□ 1.19
SHANK2-220ENST00000608988 SBF1O95248 1867 aa22.48■■□□□ 1.19
SHANK2-220ENST00000608988 GIPC1O14908 333 aa22.48■■□□□ 1.19
SHANK2-220ENST00000608988 PGK2P07205 417 aa22.48■■□□□ 1.19
SHANK2-220ENST00000608988 CCNCP24863 283 aa22.48■■□□□ 1.19
SHANK2-220ENST00000608988 PRAMEP78395 509 aa22.48■■□□□ 1.19
SHANK2-220ENST00000608988 CTBP1Q13363 440 aa22.48■■□□□ 1.19
SHANK2-220ENST00000608988 BTBD8Q5XKL5 378 aa22.48■■□□□ 1.19
SHANK2-220ENST00000608988 NOTUMQ6P988 496 aa22.48■■□□□ 1.19
SHANK2-220ENST00000608988 SNRNP27Q8WVK2 155 aaKnown RBP22.48■■□□□ 1.19
SHANK2-220ENST00000608988 L3HYPDHQ96EM0 354 aa22.48■■□□□ 1.19
SHANK2-220ENST00000608988 ENTPD7Q9NQZ7 604 aa22.48■■□□□ 1.19
SHANK2-220ENST00000608988 TREX1Q9NSU2 369 aa22.48■■□□□ 1.19
SHANK2-220ENST00000608988 GID8Q9NWU2 228 aa22.48■■□□□ 1.19
SHANK2-220ENST00000608988 FBXO5Q9UKT4 447 aa22.48■■□□□ 1.19
SHANK2-220ENST00000608988 FZD1Q9UP38 647 aa22.48■■□□□ 1.19
SHANK2-220ENST00000608988 IMPDH1P20839 514 aa22.47■■□□□ 1.19
SHANK2-220ENST00000608988 GPX3P22352 226 aa22.47■■□□□ 1.19
SHANK2-220ENST00000608988 ARNTP27540 789 aa22.47■■□□□ 1.19
SHANK2-220ENST00000608988 HOXA11P31270 313 aaPredicted RBP22.47■■□□□ 1.19
SHANK2-220ENST00000608988 PHEXP78562 749 aa22.47■■□□□ 1.19
SHANK2-220ENST00000608988 ZNF460Q14592 562 aa22.47■■□□□ 1.19
SHANK2-220ENST00000608988 DCLRE1AQ6PJP8 1040 aa22.47■■□□□ 1.19
SHANK2-220ENST00000608988 GADL1Q6ZQY3 521 aa22.47■■□□□ 1.19
SHANK2-220ENST00000608988 PPTC7Q8NI37 304 aa22.47■■□□□ 1.19
SHANK2-220ENST00000608988 MYRFLQ96LU7 910 aa22.47■■□□□ 1.19
SHANK2-220ENST00000608988 CXCL16Q9H2A7 254 aa22.47■■□□□ 1.19
SHANK2-220ENST00000608988 CNGB3Q9NQW8 809 aa22.47■■□□□ 1.19
SHANK2-220ENST00000608988 ARHGEF38Q9NXL2 777 aa22.47■■□□□ 1.19
SHANK2-220ENST00000608988 SAC3D1A6NKF1 404 aa22.47■■□□□ 1.19
SHANK2-220ENST00000608988 H3BMQ9 156 aa22.47■■□□□ 1.19
SHANK2-220ENST00000608988 NOL3O60936 208 aaKnown RBP22.47■■□□□ 1.19
SHANK2-220ENST00000608988 ESRRBO95718 433 aa22.47■■□□□ 1.19
SHANK2-220ENST00000608988 FYNP06241 537 aa22.47■■□□□ 1.19
SHANK2-220ENST00000608988 EPHX2P34913 555 aa22.47■■□□□ 1.19
SHANK2-220ENST00000608988 DAOAP59103 153 aa22.47■■□□□ 1.19
SHANK2-220ENST00000608988 MOGQ16653 247 aa22.47■■□□□ 1.19
SHANK2-220ENST00000608988 PRAMEF18Q5VWM3 479 aa22.47■■□□□ 1.19
SHANK2-220ENST00000608988 DEFB132Q7Z7B7 95 aa22.47■■□□□ 1.19
SHANK2-220ENST00000608988 EPHX4Q8IUS5 362 aa22.47■■□□□ 1.19
SHANK2-220ENST00000608988 RNF169Q8NCN4 708 aa22.47■■□□□ 1.19
SHANK2-220ENST00000608988 PDPRQ8NCN5 879 aa22.47■■□□□ 1.19
SHANK2-220ENST00000608988 DDHD1Q8NEL9 900 aa22.47■■□□□ 1.19
SHANK2-220ENST00000608988 EMID1Q96A84 441 aaPredicted RBP22.47■■□□□ 1.19
SHANK2-220ENST00000608988 COG8Q96MW5 612 aa22.47■■□□□ 1.19
SHANK2-220ENST00000608988 TMEM221A6NGB7 291 aa22.46■■□□□ 1.19
SHANK2-220ENST00000608988 SPTLC1O15269 473 aa22.46■■□□□ 1.19
SHANK2-220ENST00000608988 INHBBP09529 407 aa22.46■■□□□ 1.19
SHANK2-220ENST00000608988 KCNE1P15382 129 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms