RNA–Protein interactions for RNA: ENST00000608263.5

CTCFL-216, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 4,040 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-216ENST00000608263 FNDC5Q8NAU1 212 aa10.43□□□□□ -0.74
CTCFL-216ENST00000608263 ACTRT2Q8TDY3 377 aa10.43□□□□□ -0.74
CTCFL-216ENST00000608263 FIG4Q92562 907 aa10.43□□□□□ -0.74
CTCFL-216ENST00000608263 KCTD14Q9BQ13 255 aaPredicted RBP10.43□□□□□ -0.74
CTCFL-216ENST00000608263 DGCR6LQ9BY27 220 aa10.43□□□□□ -0.74
CTCFL-216ENST00000608263 STN1Q9H668 368 aaKnown RBP10.43□□□□□ -0.74
CTCFL-216ENST00000608263 EURLQ9NYK6 297 aa10.43□□□□□ -0.74
CTCFL-216ENST00000608263 ADAM28Q9UKQ2 775 aa10.43□□□□□ -0.74
CTCFL-216ENST00000608263 C9IYK1 514 aa10.42□□□□□ -0.74
CTCFL-216ENST00000608263 PDLIM1O00151 329 aa10.42□□□□□ -0.74
CTCFL-216ENST00000608263 PYGLP06737 847 aa10.42□□□□□ -0.74
CTCFL-216ENST00000608263 LTA4HP09960 611 aaKnown RBP10.42□□□□□ -0.74
CTCFL-216ENST00000608263 CES1P23141 567 aa10.42□□□□□ -0.74
CTCFL-216ENST00000608263 CTNNB1P35222 781 aa10.42□□□□□ -0.74
CTCFL-216ENST00000608263 RAB27AP51159 221 aa10.42□□□□□ -0.74
CTCFL-216ENST00000608263 GJA9P57773 515 aa10.42□□□□□ -0.74
CTCFL-216ENST00000608263 TRAF2Q12933 501 aa10.42□□□□□ -0.74
CTCFL-216ENST00000608263 NAB1Q13506 487 aa10.42□□□□□ -0.74
CTCFL-216ENST00000608263 NR6A1Q15406 480 aa10.42□□□□□ -0.74
CTCFL-216ENST00000608263 INSCQ1MX18 579 aa10.42□□□□□ -0.74
CTCFL-216ENST00000608263 CTC1Q2NKJ3 1217 aa10.42□□□□□ -0.74
CTCFL-216ENST00000608263 PIWIL4Q7Z3Z4 852 aaKnown RBP10.42□□□□□ -0.74
CTCFL-216ENST00000608263 LRRC52Q8N7C0 313 aa10.42□□□□□ -0.74
CTCFL-216ENST00000608263 MYLPFQ96A32 169 aa10.42□□□□□ -0.74
CTCFL-216ENST00000608263 SMARCD1Q96GM5 515 aa10.42□□□□□ -0.74
CTCFL-216ENST00000608263 ZFRQ96KR1 1074 aaKnown RBP10.42□□□□□ -0.74
CTCFL-216ENST00000608263 SPATA17Q96L03 361 aa10.42□□□□□ -0.74
CTCFL-216ENST00000608263 POLR1BQ9H9Y6 1135 aa10.42□□□□□ -0.74
CTCFL-216ENST00000608263 SPAG4Q9NPE6 437 aa10.42□□□□□ -0.74
CTCFL-216ENST00000608263 ZMYM5Q9UJ78 669 aa10.42□□□□□ -0.74
CTCFL-216ENST00000608263 DOLKQ9UPQ8 538 aa10.42□□□□□ -0.74
CTCFL-216ENST00000608263 PKP3Q9Y446 797 aa10.42□□□□□ -0.74
CTCFL-216ENST00000608263 TRAF6Q9Y4K3 522 aa10.42□□□□□ -0.74
CTCFL-216ENST00000608263 TNRC6CQ9HCJ0 1690 aaKnown RBP10.42□□□□□ -0.74
CTCFL-216ENST00000608263 LAMB1P07942 1786 aa10.42□□□□□ -0.74
CTCFL-216ENST00000608263 TMEM114B3SHH9 223 aa10.42□□□□□ -0.74
CTCFL-216ENST00000608263 H3BSA7 217 aa10.42□□□□□ -0.74
CTCFL-216ENST00000608263 BEST1O76090 585 aa10.42□□□□□ -0.74
CTCFL-216ENST00000608263 CCND3P30281 292 aaPredicted RBP10.42□□□□□ -0.74
CTCFL-216ENST00000608263 TLE2Q04725 743 aa10.42□□□□□ -0.74
CTCFL-216ENST00000608263 PLD1Q13393 1074 aa10.42□□□□□ -0.74
CTCFL-216ENST00000608263 CCNIQ14094 377 aa10.42□□□□□ -0.74
CTCFL-216ENST00000608263 ATP6AP1LQ52LC2 224 aa10.42□□□□□ -0.74
CTCFL-216ENST00000608263 SLC44A4Q53GD3 710 aa10.42□□□□□ -0.74
CTCFL-216ENST00000608263 CDCA2Q69YH5 1023 aaPredicted RBP10.42□□□□□ -0.74
CTCFL-216ENST00000608263 NAPRTQ6XQN6 538 aa10.42□□□□□ -0.74
CTCFL-216ENST00000608263 NECAB2Q7Z6G3 386 aa10.42□□□□□ -0.74
CTCFL-216ENST00000608263 C7orf61Q8IZ16 206 aa10.42□□□□□ -0.74
CTCFL-216ENST00000608263 FBXO39Q8N4B4 442 aa10.42□□□□□ -0.74
CTCFL-216ENST00000608263 ST13P5Q8NFI4 369 aaPredicted RBP10.42□□□□□ -0.74
CTCFL-216ENST00000608263 FAM162AQ96A26 154 aa10.42□□□□□ -0.74
CTCFL-216ENST00000608263 CCDC126Q96EE4 140 aa10.42□□□□□ -0.74
CTCFL-216ENST00000608263 C12orf42Q96LP6 360 aa10.42□□□□□ -0.74
CTCFL-216ENST00000608263 FBRSL1Q9HCM7 1045 aaKnown RBP10.42□□□□□ -0.74
CTCFL-216ENST00000608263 RRN3Q9NYV6 651 aa10.42□□□□□ -0.74
CTCFL-216ENST00000608263 PRPF19Q9UMS4 504 aaKnown RBP10.42□□□□□ -0.74
CTCFL-216ENST00000608263 IPPQ9Y573 584 aa10.42□□□□□ -0.74
CTCFL-216ENST00000608263 F5P12259 2224 aa10.42□□□□□ -0.74
CTCFL-216ENST00000608263 BTN3A1O00481 513 aa10.42□□□□□ -0.74
CTCFL-216ENST00000608263 SYNCRIPO60506 623 aaKnown RBP10.42□□□□□ -0.74
CTCFL-216ENST00000608263 SH3BGRLO75368 114 aa10.42□□□□□ -0.74
CTCFL-216ENST00000608263 DAB1O75553 588 aa10.42□□□□□ -0.74
CTCFL-216ENST00000608263 ATG7O95352 703 aa10.42□□□□□ -0.74
CTCFL-216ENST00000608263 CLIC3O95833 236 aa10.42□□□□□ -0.74
CTCFL-216ENST00000608263 DHRS4L1P0CG22 281 aa10.42□□□□□ -0.74
CTCFL-216ENST00000608263 IL4RP24394 825 aa10.42□□□□□ -0.74
CTCFL-216ENST00000608263 YWHAQP27348 245 aa10.42□□□□□ -0.74
CTCFL-216ENST00000608263 TKTP29401 623 aaKnown RBP10.42□□□□□ -0.74
CTCFL-216ENST00000608263 SERPINH1P50454 418 aaKnown RBP10.42□□□□□ -0.74
CTCFL-216ENST00000608263 RPS6KA3P51812 740 aa10.42□□□□□ -0.74
CTCFL-216ENST00000608263 NR1H2P55055 460 aa10.42□□□□□ -0.74
CTCFL-216ENST00000608263 LSM3P62310 102 aaKnown RBP10.42□□□□□ -0.74
CTCFL-216ENST00000608263 DCTN2Q13561 401 aaKnown RBP10.42□□□□□ -0.74
CTCFL-216ENST00000608263 GALNT3Q14435 633 aa10.42□□□□□ -0.74
CTCFL-216ENST00000608263 DDR2Q16832 855 aa10.42□□□□□ -0.74
CTCFL-216ENST00000608263 PTRHD1Q6GMV3 140 aaKnown RBP10.42□□□□□ -0.74
CTCFL-216ENST00000608263 PKN3Q6P5Z2 889 aa10.42□□□□□ -0.74
CTCFL-216ENST00000608263 PDSS2Q86YH6 399 aa10.42□□□□□ -0.74
CTCFL-216ENST00000608263 CARNMT1Q8N4J0 409 aa10.42□□□□□ -0.74
CTCFL-216ENST00000608263 NAT16Q8N8M0 369 aa10.42□□□□□ -0.74
CTCFL-216ENST00000608263 SCAMP5Q8TAC9 235 aa10.42□□□□□ -0.74
CTCFL-216ENST00000608263 PCED1BQ96HM7 432 aa10.42□□□□□ -0.74
CTCFL-216ENST00000608263 FAR2Q96K12 515 aa10.42□□□□□ -0.74
CTCFL-216ENST00000608263 ACOX2Q99424 681 aa10.42□□□□□ -0.74
CTCFL-216ENST00000608263 ABCG8Q9H221 673 aa10.42□□□□□ -0.74
CTCFL-216ENST00000608263 CXCL16Q9H2A7 254 aa10.42□□□□□ -0.74
CTCFL-216ENST00000608263 CREBZFQ9NS37 354 aa10.42□□□□□ -0.74
CTCFL-216ENST00000608263 SLC30A1Q9Y6M5 507 aa10.42□□□□□ -0.74
CTCFL-216ENST00000608263 ARAP2Q8WZ64 1704 aa10.42□□□□□ -0.74
CTCFL-216ENST00000608263 MOXD2PA6NHM9 499 aa10.42□□□□□ -0.74
CTCFL-216ENST00000608263 CBX4O00257 560 aa10.42□□□□□ -0.74
CTCFL-216ENST00000608263 STX7O15400 261 aaKnown RBP10.42□□□□□ -0.74
CTCFL-216ENST00000608263 TLL1O43897 1013 aa10.42□□□□□ -0.74
CTCFL-216ENST00000608263 NRP2O60462 931 aa10.42□□□□□ -0.74
CTCFL-216ENST00000608263 AHSGP02765 367 aa10.42□□□□□ -0.74
CTCFL-216ENST00000608263 DARSP14868 501 aaKnown RBP10.42□□□□□ -0.74
CTCFL-216ENST00000608263 NCK1P16333 377 aa10.42□□□□□ -0.74
CTCFL-216ENST00000608263 OR1E1P30953 314 aa10.42□□□□□ -0.74
CTCFL-216ENST00000608263 ZBTB17Q13105 803 aa10.42□□□□□ -0.74
CTCFL-216ENST00000608263 DDX39BQ13838 428 aaKnown RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms