RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 USP8P40818 1118 aa11.87□□□□□ -0.51
PDLIM1P1-201ENST00000604187 UQCRFS1P47985 274 aa11.87□□□□□ -0.51
PDLIM1P1-201ENST00000604187 CD97P48960 835 aa11.87□□□□□ -0.51
PDLIM1P1-201ENST00000604187 OR1D5P58170 312 aa11.87□□□□□ -0.51
PDLIM1P1-201ENST00000604187 SNRPD1P62314 119 aaKnown RBP11.87□□□□□ -0.51
PDLIM1P1-201ENST00000604187 CDC20Q12834 499 aa11.87□□□□□ -0.51
PDLIM1P1-201ENST00000604187 KLRB1Q12918 225 aa11.87□□□□□ -0.51
PDLIM1P1-201ENST00000604187 PTPN20Q4JDL3 420 aa11.87□□□□□ -0.51
PDLIM1P1-201ENST00000604187 COBLL1Q53SF7 1204 aa11.87□□□□□ -0.51
PDLIM1P1-201ENST00000604187 SPECC1LQ69YQ0 1117 aa11.87□□□□□ -0.51
PDLIM1P1-201ENST00000604187 CCDC112Q8NEF3 446 aa11.87□□□□□ -0.51
PDLIM1P1-201ENST00000604187 CEP63Q96MT8 703 aa11.87□□□□□ -0.51
PDLIM1P1-201ENST00000604187 GDAP1L1Q96MZ0 367 aa11.87□□□□□ -0.51
PDLIM1P1-201ENST00000604187 TBCBQ99426 244 aa11.87□□□□□ -0.51
PDLIM1P1-201ENST00000604187 FGF22Q9HCT0 170 aa11.87□□□□□ -0.51
PDLIM1P1-201ENST00000604187 IGSF5Q9NSI5 407 aa11.87□□□□□ -0.51
PDLIM1P1-201ENST00000604187 RRN3Q9NYV6 651 aa11.87□□□□□ -0.51
PDLIM1P1-201ENST00000604187 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.87□□□□□ -0.51
PDLIM1P1-201ENST00000604187 DAAM1Q9Y4D1 1078 aa11.87□□□□□ -0.51
PDLIM1P1-201ENST00000604187 TMEM202A6NGA9 273 aa11.86□□□□□ -0.51
PDLIM1P1-201ENST00000604187 CAPN5O15484 640 aaPredicted RBP11.86□□□□□ -0.51
PDLIM1P1-201ENST00000604187 ZNF202O95125 648 aa11.86□□□□□ -0.51
PDLIM1P1-201ENST00000604187 F9P00740 461 aa11.86□□□□□ -0.51
PDLIM1P1-201ENST00000604187 TIMP2P16035 220 aa11.86□□□□□ -0.51
PDLIM1P1-201ENST00000604187 XPAP23025 273 aaPredicted RBP11.86□□□□□ -0.51
PDLIM1P1-201ENST00000604187 OAS2P29728 719 aaKnown RBP11.86□□□□□ -0.51
PDLIM1P1-201ENST00000604187 ALDH4A1P30038 563 aa11.86□□□□□ -0.51
PDLIM1P1-201ENST00000604187 ETFBP38117 255 aa11.86□□□□□ -0.51
PDLIM1P1-201ENST00000604187 MLLT10P55197 1068 aa11.86□□□□□ -0.51
PDLIM1P1-201ENST00000604187 MAZP56270 477 aaKnown RBP11.86□□□□□ -0.51
PDLIM1P1-201ENST00000604187 GEMIN4P57678 1058 aaKnown RBP11.86□□□□□ -0.51
PDLIM1P1-201ENST00000604187 DEFB109BQ30KR1 87 aa11.86□□□□□ -0.51
PDLIM1P1-201ENST00000604187 TMEM52BQ4KMG9 183 aa11.86□□□□□ -0.51
PDLIM1P1-201ENST00000604187 ACBD5Q5T8D3 534 aaPredicted RBP11.86□□□□□ -0.51
PDLIM1P1-201ENST00000604187 GJB7Q6PEY0 223 aa11.86□□□□□ -0.51
PDLIM1P1-201ENST00000604187 IRF2BP1Q8IU81 584 aa11.86□□□□□ -0.51
PDLIM1P1-201ENST00000604187 ZNF397Q8NF99 534 aaPredicted RBP11.86□□□□□ -0.51
PDLIM1P1-201ENST00000604187 OR56A4Q8NGH8 313 aa11.86□□□□□ -0.51
PDLIM1P1-201ENST00000604187 CCL4L1Q8NHW4 92 aa11.86□□□□□ -0.51
PDLIM1P1-201ENST00000604187 SPATA20Q8TB22 786 aa11.86□□□□□ -0.51
PDLIM1P1-201ENST00000604187 APOBEC4Q8WW27 367 aaKnown RBP11.86□□□□□ -0.51
PDLIM1P1-201ENST00000604187 NT5C3BQ969T7 300 aa11.86□□□□□ -0.51
PDLIM1P1-201ENST00000604187 KIAA1143Q96AT1 154 aaPredicted RBP11.86□□□□□ -0.51
PDLIM1P1-201ENST00000604187 PGAP3Q96FM1 320 aaPredicted RBP11.86□□□□□ -0.51
PDLIM1P1-201ENST00000604187 CCDC34Q96HJ3 373 aa11.86□□□□□ -0.51
PDLIM1P1-201ENST00000604187 SLC45A3Q96JT2 553 aa11.86□□□□□ -0.51
PDLIM1P1-201ENST00000604187 DDA1Q9BW61 102 aa11.86□□□□□ -0.51
PDLIM1P1-201ENST00000604187 TMEM168Q9H0V1 697 aa11.86□□□□□ -0.51
PDLIM1P1-201ENST00000604187 GPN2Q9H9Y4 310 aaPredicted RBP11.86□□□□□ -0.51
PDLIM1P1-201ENST00000604187 MRPL40Q9NQ50 206 aaKnown RBP11.86□□□□□ -0.51
PDLIM1P1-201ENST00000604187 METRNQ9UJH8 293 aa11.86□□□□□ -0.51
PDLIM1P1-201ENST00000604187 CXorf51AA0A1B0GTR3 108 aa11.85□□□□□ -0.51
PDLIM1P1-201ENST00000604187 RHPN2P1A8MT19 583 aa11.85□□□□□ -0.51
PDLIM1P1-201ENST00000604187 BECN2A8MW95 431 aa11.85□□□□□ -0.51
PDLIM1P1-201ENST00000604187 PSMA7O14818 248 aa11.85□□□□□ -0.51
PDLIM1P1-201ENST00000604187 HSP90AA1P07900 732 aaKnown RBP11.85□□□□□ -0.51
PDLIM1P1-201ENST00000604187 NR1D1P20393 614 aa11.85□□□□□ -0.51
PDLIM1P1-201ENST00000604187 MPSTP25325 297 aa11.85□□□□□ -0.51
PDLIM1P1-201ENST00000604187 SNX16P57768 344 aa11.85□□□□□ -0.51
PDLIM1P1-201ENST00000604187 ELP6Q0PNE2 266 aa11.85□□□□□ -0.51
PDLIM1P1-201ENST00000604187 MTM1Q13496 603 aa11.85□□□□□ -0.51
PDLIM1P1-201ENST00000604187 ATP1A1-AS1Q5TC04 95 aa11.85□□□□□ -0.51
PDLIM1P1-201ENST00000604187 FOXR2Q6PJQ5 311 aa11.85□□□□□ -0.51
PDLIM1P1-201ENST00000604187 FAM129CQ86XR2 697 aa11.85□□□□□ -0.51
PDLIM1P1-201ENST00000604187 UNC5BQ8IZJ1 945 aa11.85□□□□□ -0.51
PDLIM1P1-201ENST00000604187 NETO2Q8NC67 525 aa11.85□□□□□ -0.51
PDLIM1P1-201ENST00000604187 PLA2G15Q8NCC3 412 aa11.85□□□□□ -0.51
PDLIM1P1-201ENST00000604187 AGBL5Q8NDL9 886 aa11.85□□□□□ -0.51
PDLIM1P1-201ENST00000604187 KIAA1524Q8TCG1 905 aa11.85□□□□□ -0.51
PDLIM1P1-201ENST00000604187 ASPSCR1Q9BZE9 553 aa11.85□□□□□ -0.51
PDLIM1P1-201ENST00000604187 NDFIP2Q9NV92 336 aa11.85□□□□□ -0.51
PDLIM1P1-201ENST00000604187 SLC39A1Q9NY26 324 aa11.85□□□□□ -0.51
PDLIM1P1-201ENST00000604187 PPARGC1AQ9UBK2 798 aaKnown RBP11.85□□□□□ -0.51
PDLIM1P1-201ENST00000604187 DKK3Q9UBP4 350 aa11.85□□□□□ -0.51
PDLIM1P1-201ENST00000604187 TP53TG5Q9Y2B4 290 aa11.85□□□□□ -0.51
PDLIM1P1-201ENST00000604187 DOPEY1Q5JWR5 2465 aa11.85□□□□□ -0.51
PDLIM1P1-201ENST00000604187 TRPM6Q9BX84 2022 aa11.84□□□□□ -0.51
PDLIM1P1-201ENST00000604187 ICE1Q9Y2F5 2266 aa11.84□□□□□ -0.51
PDLIM1P1-201ENST00000604187 FAM170AA1A519 330 aa11.84□□□□□ -0.51
PDLIM1P1-201ENST00000604187 CACNB4O00305 520 aaPredicted RBP11.84□□□□□ -0.51
PDLIM1P1-201ENST00000604187 TMCC1O94876 653 aa11.84□□□□□ -0.51
PDLIM1P1-201ENST00000604187 IGSF6O95976 241 aa11.84□□□□□ -0.51
PDLIM1P1-201ENST00000604187 GNLYP22749 145 aa11.84□□□□□ -0.51
PDLIM1P1-201ENST00000604187 CD1CP29017 333 aa11.84□□□□□ -0.51
PDLIM1P1-201ENST00000604187 CSTF2P33240 577 aaKnown RBP eCLIP11.84□□□□□ -0.51
PDLIM1P1-201ENST00000604187 LIG3P49916 1009 aa11.84□□□□□ -0.51
PDLIM1P1-201ENST00000604187 LIMK2P53671 638 aa11.84□□□□□ -0.51
PDLIM1P1-201ENST00000604187 KIAA1024LP59773 190 aa11.84□□□□□ -0.51
PDLIM1P1-201ENST00000604187 KRT85P78386 507 aa11.84□□□□□ -0.51
PDLIM1P1-201ENST00000604187 RAD51Q06609 339 aa11.84□□□□□ -0.51
PDLIM1P1-201ENST00000604187 SEPT6Q14141 434 aa11.84□□□□□ -0.51
PDLIM1P1-201ENST00000604187 CLPPQ16740 277 aaPredicted RBP11.84□□□□□ -0.51
PDLIM1P1-201ENST00000604187 SLC25A52Q3SY17 297 aa11.84□□□□□ -0.51
PDLIM1P1-201ENST00000604187 NKAIN2Q5VXU1 208 aa11.84□□□□□ -0.51
PDLIM1P1-201ENST00000604187 ANKS6Q68DC2 871 aa11.84□□□□□ -0.51
PDLIM1P1-201ENST00000604187 RWDD4Q6NW29 188 aaKnown RBP11.84□□□□□ -0.51
PDLIM1P1-201ENST00000604187 ENOSF1Q7L5Y1 443 aa11.84□□□□□ -0.51
PDLIM1P1-201ENST00000604187 ZNF438Q7Z4V0 828 aa11.84□□□□□ -0.51
PDLIM1P1-201ENST00000604187 FAM131BQ86XD5 332 aa11.84□□□□□ -0.51
PDLIM1P1-201ENST00000604187 ZDHHC17Q8IUH5 632 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms