RNA–Protein interactions for RNA: ENST00000604181.1

CCDC12-210, Transcript of coiled-coil domain containing 12, humanhuman

TSL 4

Gene CCDC12, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-210ENST00000604181 PCDH12Q9NPG4 1184 aa16.99■□□□□ 0.31
CCDC12-210ENST00000604181 ACSL6Q9UKU0 697 aa16.99■□□□□ 0.31
CCDC12-210ENST00000604181 TOR1BO14657 336 aa16.98■□□□□ 0.31
CCDC12-210ENST00000604181 BUB1BO60566 1050 aaPredicted RBP16.98■□□□□ 0.31
CCDC12-210ENST00000604181 RASGRP1O95267 797 aa16.98■□□□□ 0.31
CCDC12-210ENST00000604181 IGSF6O95976 241 aa16.98■□□□□ 0.31
CCDC12-210ENST00000604181 CTSEP14091 401 aa16.98■□□□□ 0.31
CCDC12-210ENST00000604181 CCKBRP32239 447 aa16.98■□□□□ 0.31
CCDC12-210ENST00000604181 PTPN9P43378 593 aa16.98■□□□□ 0.31
CCDC12-210ENST00000604181 KLK7P49862 253 aa16.98■□□□□ 0.31
CCDC12-210ENST00000604181 PEX5P50542 639 aa16.98■□□□□ 0.31
CCDC12-210ENST00000604181 SRP54P61011 504 aaKnown RBP16.98■□□□□ 0.31
CCDC12-210ENST00000604181 TPD52L1Q16890 204 aaPredicted RBP16.98■□□□□ 0.31
CCDC12-210ENST00000604181 LVRNQ6Q4G3 990 aa16.98■□□□□ 0.31
CCDC12-210ENST00000604181 STRADAQ7RTN6 431 aa16.98■□□□□ 0.31
CCDC12-210ENST00000604181 ZNF354CQ86Y25 554 aa16.98■□□□□ 0.31
CCDC12-210ENST00000604181 RTL3Q8N8U3 475 aaKnown RBP16.98■□□□□ 0.31
CCDC12-210ENST00000604181 OR1E3Q8WZA6 343 aa16.98■□□□□ 0.31
CCDC12-210ENST00000604181 PCDHB18PQ96TA0 734 aa16.98■□□□□ 0.31
CCDC12-210ENST00000604181 STK33Q9BYT3 514 aa16.98■□□□□ 0.31
CCDC12-210ENST00000604181 GANQ9H2C0 597 aa16.98■□□□□ 0.31
CCDC12-210ENST00000604181 FOXJ2Q9P0K8 574 aa16.98■□□□□ 0.31
CCDC12-210ENST00000604181 LOXL2Q9Y4K0 774 aa16.98■□□□□ 0.31
CCDC12-210ENST00000604181 SPENQ96T58 3664 aaKnown RBP16.97■□□□□ 0.31
CCDC12-210ENST00000604181 SDK2Q58EX2 2172 aa16.97■□□□□ 0.31
CCDC12-210ENST00000604181 PRAMEF33A0A0G2JMD5 474 aa16.97■□□□□ 0.31
CCDC12-210ENST00000604181 TSPAN11A1L157 253 aa16.97■□□□□ 0.31
CCDC12-210ENST00000604181 TMEM202A6NGA9 273 aa16.97■□□□□ 0.31
CCDC12-210ENST00000604181 RASA4BC9J798 803 aa16.97■□□□□ 0.31
CCDC12-210ENST00000604181 RASA4O43374 803 aa16.97■□□□□ 0.31
CCDC12-210ENST00000604181 PRAMEF10O60809 474 aa16.97■□□□□ 0.31
CCDC12-210ENST00000604181 GFPT2O94808 682 aa16.97■□□□□ 0.31
CCDC12-210ENST00000604181 PCCBP05166 539 aa16.97■□□□□ 0.31
CCDC12-210ENST00000604181 ALPIP09923 528 aa16.97■□□□□ 0.31
CCDC12-210ENST00000604181 FAM87AP0C7U9 286 aa16.97■□□□□ 0.31
CCDC12-210ENST00000604181 RFC1P35251 1148 aaPredicted RBP16.97■□□□□ 0.31
CCDC12-210ENST00000604181 BLKP51451 505 aa16.97■□□□□ 0.31
CCDC12-210ENST00000604181 ZFP36L1Q07352 338 aaKnown RBP16.97■□□□□ 0.31
CCDC12-210ENST00000604181 EIF3IQ13347 325 aaKnown RBP16.97■□□□□ 0.31
CCDC12-210ENST00000604181 DPCR1Q3MIW9 517 aa16.97■□□□□ 0.31
CCDC12-210ENST00000604181 USP53Q70EK8 1073 aa16.97■□□□□ 0.31
CCDC12-210ENST00000604181 ZFAND4Q86XD8 727 aa16.97■□□□□ 0.31
CCDC12-210ENST00000604181 CCNJLQ8IV13 435 aa16.97■□□□□ 0.31
CCDC12-210ENST00000604181 PELI3Q8N2H9 469 aa16.97■□□□□ 0.31
CCDC12-210ENST00000604181 MLKLQ8NB16 471 aa16.97■□□□□ 0.31
CCDC12-210ENST00000604181 MSANTD4Q8NCY6 345 aa16.97■□□□□ 0.31
CCDC12-210ENST00000604181 CCL4L1Q8NHW4 92 aa16.97■□□□□ 0.31
CCDC12-210ENST00000604181 HTR3CQ8WXA8 447 aa16.97■□□□□ 0.31
CCDC12-210ENST00000604181 NTAN1Q96AB6 310 aa16.97■□□□□ 0.31
CCDC12-210ENST00000604181 SGF29Q96ES7 293 aa16.97■□□□□ 0.31
CCDC12-210ENST00000604181 RBM15Q96T37 977 aaKnown RBP eCLIP16.97■□□□□ 0.31
CCDC12-210ENST00000604181 RETREG1Q9H6L5 497 aa16.97■□□□□ 0.31
CCDC12-210ENST00000604181 FGF22Q9HCT0 170 aa16.97■□□□□ 0.31
CCDC12-210ENST00000604181 MRPL40Q9NQ50 206 aaKnown RBP16.97■□□□□ 0.31
CCDC12-210ENST00000604181 SAMSN1Q9NSI8 373 aaKnown RBP16.97■□□□□ 0.31
CCDC12-210ENST00000604181 STARD5Q9NSY2 213 aa16.97■□□□□ 0.31
CCDC12-210ENST00000604181 KLQ9UEF7 1012 aa16.97■□□□□ 0.31
CCDC12-210ENST00000604181 ZSCAN5CA6NGD5 496 aaPredicted RBP16.96■□□□□ 0.31
CCDC12-210ENST00000604181 PES1O00541 588 aaKnown RBP16.96■□□□□ 0.31
CCDC12-210ENST00000604181 TERTO14746 1132 aaKnown RBP16.96■□□□□ 0.31
CCDC12-210ENST00000604181 EPHB6O15197 1021 aa16.96■□□□□ 0.31
CCDC12-210ENST00000604181 NVLO15381 856 aaKnown RBP16.96■□□□□ 0.31
CCDC12-210ENST00000604181 EPHB2P29323 1055 aa16.96■□□□□ 0.31
CCDC12-210ENST00000604181 MMP12P39900 470 aa16.96■□□□□ 0.31
CCDC12-210ENST00000604181 RGRP47804 291 aa16.96■□□□□ 0.31
CCDC12-210ENST00000604181 LIG3P49916 1009 aa16.96■□□□□ 0.31
CCDC12-210ENST00000604181 CSRP3P50461 194 aa16.96■□□□□ 0.31
CCDC12-210ENST00000604181 CYP4F2P78329 520 aa16.96■□□□□ 0.31
CCDC12-210ENST00000604181 CDR2Q01850 454 aa16.96■□□□□ 0.31
CCDC12-210ENST00000604181 RAD51Q06609 339 aa16.96■□□□□ 0.31
CCDC12-210ENST00000604181 SERINC3Q13530 473 aa16.96■□□□□ 0.31
CCDC12-210ENST00000604181 UGP2Q16851 508 aa16.96■□□□□ 0.31
CCDC12-210ENST00000604181 INO80DQ53TQ3 878 aaPredicted RBP16.96■□□□□ 0.31
CCDC12-210ENST00000604181 GKN2Q86XP6 184 aa16.96■□□□□ 0.31
CCDC12-210ENST00000604181 SCG3Q8WXD2 468 aaKnown RBP16.96■□□□□ 0.31
CCDC12-210ENST00000604181 WDR92Q96MX6 357 aa16.96■□□□□ 0.31
CCDC12-210ENST00000604181 STRADBQ9C0K7 418 aa16.96■□□□□ 0.31
CCDC12-210ENST00000604181 SUV39H2Q9H5I1 410 aa16.96■□□□□ 0.31
CCDC12-210ENST00000604181 IL17BQ9UHF5 180 aa16.96■□□□□ 0.31
CCDC12-210ENST00000604181 PCDHGA4Q9Y5G9 962 aa16.96■□□□□ 0.31
CCDC12-210ENST00000604181 RNF215Q9Y6U7 377 aa16.96■□□□□ 0.31
CCDC12-210ENST00000604181 LRRK2Q5S007 2527 aa16.95■□□□□ 0.3
CCDC12-210ENST00000604181 TMEM110-MUSTN1A8MSY1 372 aa16.95■□□□□ 0.3
CCDC12-210ENST00000604181 C9orf172C9J069 976 aa16.95■□□□□ 0.3
CCDC12-210ENST00000604181 J3KR12 359 aa16.95■□□□□ 0.3
CCDC12-210ENST00000604181 JMJD7P0C870 316 aa16.95■□□□□ 0.3
CCDC12-210ENST00000604181 LIPCP11150 499 aa16.95■□□□□ 0.3
CCDC12-210ENST00000604181 GM2AP17900 193 aa16.95■□□□□ 0.3
CCDC12-210ENST00000604181 ELP6Q0PNE2 266 aa16.95■□□□□ 0.3
CCDC12-210ENST00000604181 RALGDSQ12967 914 aa16.95■□□□□ 0.3
CCDC12-210ENST00000604181 CERCAMQ5T4B2 595 aa16.95■□□□□ 0.3
CCDC12-210ENST00000604181 WDR59Q6PJI9 974 aa16.95■□□□□ 0.3
CCDC12-210ENST00000604181 OGFOD3Q6PK18 319 aa16.95■□□□□ 0.3
CCDC12-210ENST00000604181 SPRED1Q7Z699 444 aa16.95■□□□□ 0.3
CCDC12-210ENST00000604181 CAMK1DQ8IU85 385 aa16.95■□□□□ 0.3
CCDC12-210ENST00000604181 SLITRK4Q8IW52 837 aa16.95■□□□□ 0.3
CCDC12-210ENST00000604181 CASKIN2Q8WXE0 1202 aa16.95■□□□□ 0.3
CCDC12-210ENST00000604181 USP7Q93009 1102 aa16.95■□□□□ 0.3
CCDC12-210ENST00000604181 NSMCE3Q96MG7 304 aa16.95■□□□□ 0.3
CCDC12-210ENST00000604181 TMEM74Q96NL1 305 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms