RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 ETS2P15036 469 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 BMP6P22004 513 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 PTX3P26022 381 aaPredicted RBP5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 CTNNA2P26232 953 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 SLC26A3P40879 764 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 NPY4RP50391 375 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 GATMP50440 423 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 HNRNPMP52272 730 aaKnown RBP eCLIP5.07□□□□□ -1.61e-8■■□□□ 11.9
SPTBN1-206ENST00000602898 HNRNPFP52597 415 aaKnown RBP5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 S100A12P80511 92 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 CKAP4Q07065 602 aaKnown RBP5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 SPEM2Q0P670 501 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 GPS1Q13098 491 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 THOC5Q13769 683 aaKnown RBP5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 ADCK5Q3MIX3 580 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 EFHC1Q5JVL4 640 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 C10orf120Q5SQS8 335 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 ZBTB41Q5SVQ8 909 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 PIK3AP1Q6ZUJ8 805 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 USP53Q70EK8 1073 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 USP43Q70EL4 1123 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 TPRA1Q86W33 373 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 ARMC8Q8IUR7 673 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 ZC3H7AQ8IWR0 971 aaKnown RBP5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 IFT20Q8IY31 132 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 RIBC1Q8N443 379 aaPredicted RBP5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 MINDY1Q8N5J2 469 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 FAM181AQ8N9Y4 354 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 HIPK4Q8NE63 616 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 PDZD8Q8NEN9 1154 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 OR2T34Q8NGX1 318 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 OR10Z1Q8NGY1 313 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 CELF1Q92879 486 aaKnown RBP5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 KAT5Q92993 513 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 TWNKQ96RR1 684 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 KCNJ15Q99712 375 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 COQ7Q99807 217 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 C1orf43Q9BWL3 253 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 IMPG2Q9BZV3 1241 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 RIBC2Q9H4K1 309 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 ZNF287Q9HBT7 754 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 NGBQ9NPG2 151 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 PPANQ9NQ55 473 aaKnown RBP5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 ZDHHC3Q9NYG2 299 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 LPAR3Q9UBY5 353 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 KCND3Q9UK17 655 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 ADAMTS6Q9UKP5 1117 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 RBBP6Q7Z6E9 1792 aaKnown RBP5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 GRM8O00222 908 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 STX16O14662 325 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 FOXP2O15409 715 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 ECDO95905 644 aaPredicted RBP5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 LYNP07948 512 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 KRT16P08779 473 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 GAAP10253 952 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 ZNF12P17014 697 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 GTF2H1P32780 548 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 SLC26A2P50443 739 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 STAT2P52630 851 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 ADKP55263 362 aaKnown RBP5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 NAA20P61599 178 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 ARF5P84085 180 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 SPIRE1Q08AE8 756 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 DDX39BQ13838 428 aaKnown RBP5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 RPS6KA2Q15349 733 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 SGCAQ16586 387 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 HERC4Q5GLZ8 1057 aaPredicted RBP5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 STRIP1Q5VSL9 837 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 NIPAL1Q6NVV3 410 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 KLHL17Q6TDP4 642 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 IDO2Q6ZQW0 420 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 C8orf86Q6ZUL3 223 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 FAM217AQ8IXS0 508 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 SYCE1Q8N0S2 351 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 MB21D1Q8N884 522 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 SPATA4Q8NEY3 305 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 METTL6Q8TCB7 284 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 DGCR14Q96DF8 476 aaKnown RBP5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 ZNF274Q96GC6 653 aaPredicted RBP5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 GCNAQ96QF7 691 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 ZSCAN5AQ9BUG6 496 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 METTL22Q9BUU2 404 aaPredicted RBP5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 PLGRKTQ9HBL7 147 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 SH3BP4Q9P0V3 963 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 MBD2Q9UBB5 411 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 STOML1Q9UBI4 398 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 TNFRSF10DQ9UBN6 386 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 CPA4Q9UI42 421 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 NAGPAQ9UK23 515 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 PADI4Q9UM07 663 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 SMG5Q9UPR3 1016 aaKnown RBP5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 DERAQ9Y315 318 aa5.07□□□□□ -1.6
SPTBN1-206ENST00000602898 OR2AG2A6NM03 316 aa5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 OR6C76A6NM76 312 aa5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 NDUFS8O00217 210 aa5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 ZNF263O14978 683 aa5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 NKRFO15226 690 aaKnown RBP eCLIP5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 UFL1O94874 794 aa5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 LIPFP07098 398 aa5.06□□□□□ -1.6
SPTBN1-206ENST00000602898 TMEM253P0C7T8 217 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms