RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 ASCL3Q9NQ33 180 aa17.13■□□□□ 0.33
SCAF1-204ENST00000601038 RTN4Q9NQC3 1192 aaKnown RBP17.13■□□□□ 0.33
SCAF1-204ENST00000601038 PCSK1NQ9UHG2 260 aa17.13■□□□□ 0.33
SCAF1-204ENST00000601038 PADI4Q9UM07 663 aa17.13■□□□□ 0.33
SCAF1-204ENST00000601038 ATP8A1Q9Y2Q0 1164 aa17.13■□□□□ 0.33
SCAF1-204ENST00000601038 ENTPD2Q9Y5L3 495 aa17.13■□□□□ 0.33
SCAF1-204ENST00000601038 IGSF10Q6WRI0 2623 aa17.12■□□□□ 0.33
SCAF1-204ENST00000601038 TEX51A0A1B0GUA7 166 aa17.12■□□□□ 0.33
SCAF1-204ENST00000601038 LRRC53A6NM62 1247 aa17.12■□□□□ 0.33
SCAF1-204ENST00000601038 ATXN7O15265 892 aaPredicted RBP17.12■□□□□ 0.33
SCAF1-204ENST00000601038 DAPK3O43293 454 aa17.12■□□□□ 0.33
SCAF1-204ENST00000601038 ATMINO43313 823 aaPredicted RBP17.12■□□□□ 0.33
SCAF1-204ENST00000601038 RNF8O76064 485 aa17.12■□□□□ 0.33
SCAF1-204ENST00000601038 ALPIP09923 528 aa17.12■□□□□ 0.33
SCAF1-204ENST00000601038 GZMAP12544 262 aa17.12■□□□□ 0.33
SCAF1-204ENST00000601038 HTR1BP28222 390 aa17.12■□□□□ 0.33
SCAF1-204ENST00000601038 MMP12P39900 470 aa17.12■□□□□ 0.33
SCAF1-204ENST00000601038 RGRP47804 291 aa17.12■□□□□ 0.33
SCAF1-204ENST00000601038 LIG3P49916 1009 aa17.12■□□□□ 0.33
SCAF1-204ENST00000601038 TYRO3Q06418 890 aa17.12■□□□□ 0.33
SCAF1-204ENST00000601038 NSUN2Q08J23 767 aaKnown RBP eCLIP17.12■□□□□ 0.33
SCAF1-204ENST00000601038 INPP5AQ14642 412 aa17.12■□□□□ 0.33
SCAF1-204ENST00000601038 NFATC4Q14934 902 aa17.12■□□□□ 0.33
SCAF1-204ENST00000601038 RFX8Q6ZV50 586 aa17.12■□□□□ 0.33
SCAF1-204ENST00000601038 HID1Q8IV36 788 aa17.12■□□□□ 0.33
SCAF1-204ENST00000601038 PSTKQ8IV42 348 aaKnown RBP17.12■□□□□ 0.33
SCAF1-204ENST00000601038 TSEN2Q8NCE0 465 aaKnown RBP17.12■□□□□ 0.33
SCAF1-204ENST00000601038 ATXN7L3BQ96GX2 97 aa17.12■□□□□ 0.33
SCAF1-204ENST00000601038 PEBP4Q96S96 227 aa17.12■□□□□ 0.33
SCAF1-204ENST00000601038 APOOQ9BUR5 198 aa17.12■□□□□ 0.33
SCAF1-204ENST00000601038 SNRNP25Q9BV90 132 aaKnown RBP17.12■□□□□ 0.33
SCAF1-204ENST00000601038 ATP13A3Q9H7F0 1226 aa17.12■□□□□ 0.33
SCAF1-204ENST00000601038 THSD1Q9NS62 852 aa17.12■□□□□ 0.33
SCAF1-204ENST00000601038 DOLKQ9UPQ8 538 aa17.12■□□□□ 0.33
SCAF1-204ENST00000601038 SATB2Q9UPW6 733 aa17.12■□□□□ 0.33
SCAF1-204ENST00000601038 LOC400499M0QZD8 3231 aa17.12■□□□□ 0.33
SCAF1-204ENST00000601038 LRRK1Q38SD2 2015 aa17.11■□□□□ 0.33
SCAF1-204ENST00000601038 CFAP69A5D8W1 941 aa17.11■□□□□ 0.33
SCAF1-204ENST00000601038 RASGRP1O95267 797 aa17.11■□□□□ 0.33
SCAF1-204ENST00000601038 FTLP02792 175 aaPredicted RBP17.11■□□□□ 0.33
SCAF1-204ENST00000601038 CTSEP14091 401 aa17.11■□□□□ 0.33
SCAF1-204ENST00000601038 ERCC2P18074 760 aa17.11■□□□□ 0.33
SCAF1-204ENST00000601038 SERPINA4P29622 427 aa17.11■□□□□ 0.33
SCAF1-204ENST00000601038 MIPP30301 263 aa17.11■□□□□ 0.33
SCAF1-204ENST00000601038 HCAR3P49019 387 aa17.11■□□□□ 0.33
SCAF1-204ENST00000601038 ZNF135P52742 658 aaPredicted RBP17.11■□□□□ 0.33
SCAF1-204ENST00000601038 RFTN1Q14699 578 aaPredicted RBP17.11■□□□□ 0.33
SCAF1-204ENST00000601038 ALG11Q2TAA5 492 aa17.11■□□□□ 0.33
SCAF1-204ENST00000601038 C3orf38Q5JPI3 329 aa17.11■□□□□ 0.33
SCAF1-204ENST00000601038 CRTC1Q6UUV9 634 aa17.11■□□□□ 0.33
SCAF1-204ENST00000601038 ENPP7Q6UWV6 458 aa17.11■□□□□ 0.33
SCAF1-204ENST00000601038 ZSWIM9Q86XI8 627 aa17.11■□□□□ 0.33
SCAF1-204ENST00000601038 ARHGAP12Q8IWW6 846 aa17.11■□□□□ 0.33
SCAF1-204ENST00000601038 ATL2Q8NHH9 583 aa17.11■□□□□ 0.33
SCAF1-204ENST00000601038 SLC39A7Q92504 469 aa17.11■□□□□ 0.33
SCAF1-204ENST00000601038 TSACCQ96A04 125 aaPredicted RBP17.11■□□□□ 0.33
SCAF1-204ENST00000601038 ECHDC3Q96DC8 303 aa17.11■□□□□ 0.33
SCAF1-204ENST00000601038 NAF1Q96HR8 494 aaKnown RBP17.11■□□□□ 0.33
SCAF1-204ENST00000601038 SLC46A1Q96NT5 459 aa17.11■□□□□ 0.33
SCAF1-204ENST00000601038 KCTD15Q96SI1 283 aaPredicted RBP17.11■□□□□ 0.33
SCAF1-204ENST00000601038 BPIFA3Q9BQP9 254 aa17.11■□□□□ 0.33
SCAF1-204ENST00000601038 EDEM3Q9BZQ6 932 aa17.11■□□□□ 0.33
SCAF1-204ENST00000601038 HAUS4Q9H6D7 363 aa17.11■□□□□ 0.33
SCAF1-204ENST00000601038 AIPL1Q9NZN9 384 aa17.11■□□□□ 0.33
SCAF1-204ENST00000601038 OR1A2Q9Y585 309 aa17.11■□□□□ 0.33
SCAF1-204ENST00000601038 PCDHGA8Q9Y5G5 932 aa17.11■□□□□ 0.33
SCAF1-204ENST00000601038 COL27A1Q8IZC6 1860 aaPredicted RBP17.1■□□□□ 0.33
SCAF1-204ENST00000601038 A0A1W2PNU3 283 aaPredicted RBP17.1■□□□□ 0.33
SCAF1-204ENST00000601038 PRPSAP2O60256 369 aa17.1■□□□□ 0.33
SCAF1-204ENST00000601038 CELA2BP08218 269 aaPredicted RBP17.1■□□□□ 0.33
SCAF1-204ENST00000601038 RBMS1P29558 406 aaKnown RBP17.1■□□□□ 0.33
SCAF1-204ENST00000601038 SRP54P61011 504 aaKnown RBP17.1■□□□□ 0.33
SCAF1-204ENST00000601038 CXADRP78310 365 aa17.1■□□□□ 0.33
SCAF1-204ENST00000601038 IL10RBQ08334 325 aa17.1■□□□□ 0.33
SCAF1-204ENST00000601038 MTM1Q13496 603 aa17.1■□□□□ 0.33
SCAF1-204ENST00000601038 ASIC2Q16515 512 aa17.1■□□□□ 0.33
SCAF1-204ENST00000601038 FILIP1LQ4L180 1135 aa17.1■□□□□ 0.33
SCAF1-204ENST00000601038 PPP6R3Q5H9R7 873 aaPredicted RBP17.1■□□□□ 0.33
SCAF1-204ENST00000601038 BROXQ5VW32 411 aa17.1■□□□□ 0.33
SCAF1-204ENST00000601038 CYP4V2Q6ZWL3 525 aaPredicted RBP17.1■□□□□ 0.33
SCAF1-204ENST00000601038 ZNF571Q7Z3V5 609 aaPredicted RBP17.1■□□□□ 0.33
SCAF1-204ENST00000601038 GKN2Q86XP6 184 aa17.1■□□□□ 0.33
SCAF1-204ENST00000601038 ARL10Q8N8L6 244 aa17.1■□□□□ 0.33
SCAF1-204ENST00000601038 KCNE4Q8WWG9 221 aa17.1■□□□□ 0.33
SCAF1-204ENST00000601038 CCDC3Q9BQI4 270 aa17.1■□□□□ 0.33
SCAF1-204ENST00000601038 CINPQ9BW66 212 aaPredicted RBP17.1■□□□□ 0.33
SCAF1-204ENST00000601038 DPH1Q9BZG8 443 aa17.1■□□□□ 0.33
SCAF1-204ENST00000601038 SP110Q9HB58 689 aa17.1■□□□□ 0.33
SCAF1-204ENST00000601038 GULP1Q9UBP9 304 aa17.1■□□□□ 0.33
SCAF1-204ENST00000601038 SMTNL1A8MU46 457 aa17.09■□□□□ 0.33
SCAF1-204ENST00000601038 DFFAO00273 331 aa17.09■□□□□ 0.33
SCAF1-204ENST00000601038 NTN3O00634 580 aaPredicted RBP17.09■□□□□ 0.33
SCAF1-204ENST00000601038 PRKCGP05129 697 aa17.09■□□□□ 0.33
SCAF1-204ENST00000601038 PRKCIP41743 596 aa17.09■□□□□ 0.33
SCAF1-204ENST00000601038 UCNP55089 124 aa17.09■□□□□ 0.33
SCAF1-204ENST00000601038 POLR2LP62875 67 aaKnown RBP17.09■□□□□ 0.33
SCAF1-204ENST00000601038 BCL2L1Q07817 233 aa17.09■□□□□ 0.33
SCAF1-204ENST00000601038 RALGDSQ12967 914 aa17.09■□□□□ 0.33
SCAF1-204ENST00000601038 SPIDRQ14159 915 aa17.09■□□□□ 0.33
SCAF1-204ENST00000601038 ANO6Q4KMQ2 910 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms