RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 ANKRD22Q5VYY1 191 aa12.73□□□□□ -0.37
CHMP2A-206ENST00000600118 TSSK4Q6SA08 328 aa12.73□□□□□ -0.37
CHMP2A-206ENST00000600118 KBTBD6Q86V97 674 aa12.73□□□□□ -0.37
CHMP2A-206ENST00000600118 PGBD3Q8N328 593 aa12.73□□□□□ -0.37
CHMP2A-206ENST00000600118 NAT8LQ8N9F0 302 aa12.73□□□□□ -0.37
CHMP2A-206ENST00000600118 PDCD6IPQ8WUM4 868 aaKnown RBP12.73□□□□□ -0.37
CHMP2A-206ENST00000600118 SEC14L1Q92503 715 aa12.73□□□□□ -0.37
CHMP2A-206ENST00000600118 RAB7BQ96AH8 199 aa12.73□□□□□ -0.37
CHMP2A-206ENST00000600118 TBL1YQ9BQ87 522 aa12.73□□□□□ -0.37
CHMP2A-206ENST00000600118 ADGRE3Q9BY15 652 aa12.73□□□□□ -0.37
CHMP2A-206ENST00000600118 NEUROG2Q9H2A3 272 aa12.73□□□□□ -0.37
CHMP2A-206ENST00000600118 CD93Q9NPY3 652 aa12.73□□□□□ -0.37
CHMP2A-206ENST00000600118 DYRK4Q9NR20 520 aa12.73□□□□□ -0.37
CHMP2A-206ENST00000600118 BCCIPQ9P287 314 aaKnown RBP eCLIP12.73□□□□□ -0.37
CHMP2A-206ENST00000600118 PHTF1Q9UMS5 762 aa12.73□□□□□ -0.37
CHMP2A-206ENST00000600118 A0A0J9YYE9 177 aa12.72□□□□□ -0.37
CHMP2A-206ENST00000600118 EFCAB8A8MWE9 144 aa12.72□□□□□ -0.37
CHMP2A-206ENST00000600118 ANKRD66B4E2M5 251 aa12.72□□□□□ -0.37
CHMP2A-206ENST00000600118 E7EVH7 732 aa12.72□□□□□ -0.37
CHMP2A-206ENST00000600118 RIOK3O14730 519 aaKnown RBP12.72□□□□□ -0.37
CHMP2A-206ENST00000600118 AXIN1O15169 862 aa12.72□□□□□ -0.37
CHMP2A-206ENST00000600118 AP1G1O43747 822 aa12.72□□□□□ -0.37
CHMP2A-206ENST00000600118 ZNF217O75362 1048 aa12.72□□□□□ -0.37
CHMP2A-206ENST00000600118 TMEM63AO94886 807 aa12.72□□□□□ -0.37
CHMP2A-206ENST00000600118 SEC31AO94979 1220 aaKnown RBP12.72□□□□□ -0.37
CHMP2A-206ENST00000600118 TRBC1P01850 177 aa12.72□□□□□ -0.37
CHMP2A-206ENST00000600118 FGF1P05230 155 aa12.72□□□□□ -0.37
CHMP2A-206ENST00000600118 ACADMP11310 421 aa12.72□□□□□ -0.37
CHMP2A-206ENST00000600118 CHRNA4P43681 627 aa12.72□□□□□ -0.37
CHMP2A-206ENST00000600118 RPL21P46778 160 aaKnown RBP12.72□□□□□ -0.37
CHMP2A-206ENST00000600118 CCDC15Q0P6D6 951 aa12.72□□□□□ -0.37
CHMP2A-206ENST00000600118 MSLNQ13421 630 aaPredicted RBP12.72□□□□□ -0.37
CHMP2A-206ENST00000600118 GALNT3Q14435 633 aa12.72□□□□□ -0.37
CHMP2A-206ENST00000600118 SIRPB2Q5JXA9 342 aa12.72□□□□□ -0.37
CHMP2A-206ENST00000600118 SYCP2LQ5T4T6 812 aa12.72□□□□□ -0.37
CHMP2A-206ENST00000600118 CFAP58Q5T655 872 aa12.72□□□□□ -0.37
CHMP2A-206ENST00000600118 IZUMO3Q5VZ72 239 aa12.72□□□□□ -0.37
CHMP2A-206ENST00000600118 NAPEPLDQ6IQ20 393 aa12.72□□□□□ -0.37
CHMP2A-206ENST00000600118 FBXL19Q6PCT2 694 aa12.72□□□□□ -0.37
CHMP2A-206ENST00000600118 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.72□□□□□ -0.37
CHMP2A-206ENST00000600118 ZNF534Q76KX8 674 aa12.72□□□□□ -0.37
CHMP2A-206ENST00000600118 KDELC2Q7Z4H8 507 aa12.72□□□□□ -0.37
CHMP2A-206ENST00000600118 LINC00523Q86TU6 105 aa12.72□□□□□ -0.37
CHMP2A-206ENST00000600118 TTC7BQ86TV6 843 aa12.72□□□□□ -0.37
CHMP2A-206ENST00000600118 WDR5BQ86VZ2 330 aa12.72□□□□□ -0.37
CHMP2A-206ENST00000600118 PPIL6Q8IXY8 311 aa12.72□□□□□ -0.37
CHMP2A-206ENST00000600118 MCUQ8NE86 351 aa12.72□□□□□ -0.37
CHMP2A-206ENST00000600118 LPCAT1Q8NF37 534 aa12.72□□□□□ -0.37
CHMP2A-206ENST00000600118 IFT43Q96FT9 208 aa12.72□□□□□ -0.37
CHMP2A-206ENST00000600118 SCRN2Q96FV2 425 aa12.72□□□□□ -0.37
CHMP2A-206ENST00000600118 SMIM14Q96QK8 99 aa12.72□□□□□ -0.37
CHMP2A-206ENST00000600118 LYSMD1Q96S90 227 aa12.72□□□□□ -0.37
CHMP2A-206ENST00000600118 OMDQ99983 421 aa12.72□□□□□ -0.37
CHMP2A-206ENST00000600118 APOL2Q9BQE5 337 aa12.72□□□□□ -0.37
CHMP2A-206ENST00000600118 FSD1LQ9BXM9 530 aa12.72□□□□□ -0.37
CHMP2A-206ENST00000600118 TPSD1Q9BZJ3 242 aa12.72□□□□□ -0.37
CHMP2A-206ENST00000600118 RAB17Q9H0T7 212 aa12.72□□□□□ -0.37
CHMP2A-206ENST00000600118 PCDH12Q9NPG4 1184 aa12.72□□□□□ -0.37
CHMP2A-206ENST00000600118 CASS4Q9NQ75 786 aa12.72□□□□□ -0.37
CHMP2A-206ENST00000600118 DMGDHQ9UI17 866 aaKnown RBP12.72□□□□□ -0.37
CHMP2A-206ENST00000600118 TPX2Q9ULW0 747 aaKnown RBP12.72□□□□□ -0.37
CHMP2A-206ENST00000600118 SNX24Q9Y343 169 aa12.72□□□□□ -0.37
CHMP2A-206ENST00000600118 FADS3Q9Y5Q0 445 aa12.72□□□□□ -0.37
CHMP2A-206ENST00000600118 PLRG1O43660 514 aaKnown RBP12.71□□□□□ -0.37
CHMP2A-206ENST00000600118 SLU7O95391 586 aaKnown RBP12.71□□□□□ -0.37
CHMP2A-206ENST00000600118 PRKCGP05129 697 aa12.71□□□□□ -0.37
CHMP2A-206ENST00000600118 ITIH2P19823 946 aa12.71□□□□□ -0.37
CHMP2A-206ENST00000600118 OXTRP30559 389 aa12.71□□□□□ -0.37
CHMP2A-206ENST00000600118 MMP12P39900 470 aa12.71□□□□□ -0.37
CHMP2A-206ENST00000600118 GRIA1P42261 906 aa12.71□□□□□ -0.37
CHMP2A-206ENST00000600118 ADPRHP54922 357 aa12.71□□□□□ -0.37
CHMP2A-206ENST00000600118 SLC7A5Q01650 507 aa12.71□□□□□ -0.37
CHMP2A-206ENST00000600118 CSTF1Q05048 431 aaKnown RBP12.71□□□□□ -0.37
CHMP2A-206ENST00000600118 RALGDSQ12967 914 aa12.71□□□□□ -0.37
CHMP2A-206ENST00000600118 PTPRRQ15256 657 aa12.71□□□□□ -0.37
CHMP2A-206ENST00000600118 CDKN3Q16667 212 aa12.71□□□□□ -0.37
CHMP2A-206ENST00000600118 ZNF528Q3MIS6 628 aa12.71□□□□□ -0.37
CHMP2A-206ENST00000600118 TMEM52BQ4KMG9 183 aa12.71□□□□□ -0.37
CHMP2A-206ENST00000600118 LRRC73Q5JTD7 316 aa12.71□□□□□ -0.37
CHMP2A-206ENST00000600118 HIBCHQ6NVY1 386 aaPredicted RBP12.71□□□□□ -0.37
CHMP2A-206ENST00000600118 PCGF5Q86SE9 256 aa12.71□□□□□ -0.37
CHMP2A-206ENST00000600118 HOOK3Q86VS8 718 aa12.71□□□□□ -0.37
CHMP2A-206ENST00000600118 LONP2Q86WA8 852 aa12.71□□□□□ -0.37
CHMP2A-206ENST00000600118 SLC25A41Q8N5S1 370 aa12.71□□□□□ -0.37
CHMP2A-206ENST00000600118 GANCQ8TET4 914 aa12.71□□□□□ -0.37
CHMP2A-206ENST00000600118 SNF8Q96H20 258 aa12.71□□□□□ -0.37
CHMP2A-206ENST00000600118 LRFN3Q9BTN0 628 aa12.71□□□□□ -0.37
CHMP2A-206ENST00000600118 TRIM31Q9BZY9 425 aa12.71□□□□□ -0.37
CHMP2A-206ENST00000600118 KDM4CQ9H3R0 1056 aa12.71□□□□□ -0.37
CHMP2A-206ENST00000600118 WSB2Q9NYS7 404 aaPredicted RBP12.71□□□□□ -0.37
CHMP2A-206ENST00000600118 GRHL1Q9NZI5 618 aa12.71□□□□□ -0.37
CHMP2A-206ENST00000600118 WHRNQ9P202 907 aa12.71□□□□□ -0.37
CHMP2A-206ENST00000600118 B4GALT6Q9UBX8 382 aa12.71□□□□□ -0.37
CHMP2A-206ENST00000600118 NCKAP1Q9Y2A7 1128 aa12.71□□□□□ -0.37
CHMP2A-206ENST00000600118 UTP11Q9Y3A2 253 aaKnown RBP12.71□□□□□ -0.37
CHMP2A-206ENST00000600118 CUL9Q8IWT3 2517 aa12.71□□□□□ -0.37
CHMP2A-206ENST00000600118 IGHV1OR15-9A0A0B4J2B8 117 aa12.7□□□□□ -0.38
CHMP2A-206ENST00000600118 CAPN8A6NHC0 703 aa12.7□□□□□ -0.38
CHMP2A-206ENST00000600118 NPIPB15A6NHN6 443 aaPredicted RBP12.7□□□□□ -0.38
CHMP2A-206ENST00000600118 SMAPO00193 183 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms