RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 ADGRG1Q9Y653 693 aa13.96□□□□□ -0.17
UPF1-205ENST00000598209 HS3ST3A1Q9Y663 406 aa13.96□□□□□ -0.17
UPF1-205ENST00000598209 DNAH14Q0VDD8 3507 aa13.95□□□□□ -0.18
UPF1-205ENST00000598209 A0A1W2PQ67 120 aa13.95□□□□□ -0.18
UPF1-205ENST00000598209 CCDC66A2RUB6 948 aa13.95□□□□□ -0.18
UPF1-205ENST00000598209 GOLGA6L3A6NEY3 463 aa13.95□□□□□ -0.18
UPF1-205ENST00000598209 KCNK1O00180 336 aa13.95□□□□□ -0.18
UPF1-205ENST00000598209 ARHGAP6O43182 974 aa13.95□□□□□ -0.18
UPF1-205ENST00000598209 DFNA5O60443 496 aa13.95□□□□□ -0.18
UPF1-205ENST00000598209 TM7SF2O76062 418 aa13.95□□□□□ -0.18
UPF1-205ENST00000598209 KCNK5O95279 499 aa13.95□□□□□ -0.18
UPF1-205ENST00000598209 CPP00450 1065 aa13.95□□□□□ -0.18
UPF1-205ENST00000598209 JCHAINP01591 159 aa13.95□□□□□ -0.18
UPF1-205ENST00000598209 HLA-DQB2P05538 268 aa13.95□□□□□ -0.18
UPF1-205ENST00000598209 THEGLP0DJG4 465 aa13.95□□□□□ -0.18
UPF1-205ENST00000598209 CSRP1P21291 193 aaKnown RBP13.95□□□□□ -0.18
UPF1-205ENST00000598209 TGM2P21980 687 aa13.95□□□□□ -0.18
UPF1-205ENST00000598209 MMP12P39900 470 aa13.95□□□□□ -0.18
UPF1-205ENST00000598209 NR2C2P49116 596 aa13.95□□□□□ -0.18
UPF1-205ENST00000598209 CCT8P50990 548 aa13.95□□□□□ -0.18
UPF1-205ENST00000598209 NOVA1P51513 510 aaKnown RBP13.95□□□□□ -0.18
UPF1-205ENST00000598209 POLR2LP62875 67 aaKnown RBP13.95□□□□□ -0.18
UPF1-205ENST00000598209 FAM193AP78312 1265 aa13.95□□□□□ -0.18
UPF1-205ENST00000598209 IFI35P80217 286 aaPredicted RBP13.95□□□□□ -0.18
UPF1-205ENST00000598209 SEMG2Q02383 582 aa13.95□□□□□ -0.18
UPF1-205ENST00000598209 DSC2Q02487 901 aa13.95□□□□□ -0.18
UPF1-205ENST00000598209 ADCY2Q08462 1091 aa13.95□□□□□ -0.18
UPF1-205ENST00000598209 AP1B1Q10567 949 aa13.95□□□□□ -0.18
UPF1-205ENST00000598209 TRAF2Q12933 501 aa13.95□□□□□ -0.18
UPF1-205ENST00000598209 PPP2R5EQ16537 467 aa13.95□□□□□ -0.18
UPF1-205ENST00000598209 PRAMEF14Q5SWL7 426 aa13.95□□□□□ -0.18
UPF1-205ENST00000598209 ALG1LQ6GMV1 187 aa13.95□□□□□ -0.18
UPF1-205ENST00000598209 BZW1Q7L1Q6 419 aaKnown RBP13.95□□□□□ -0.18
UPF1-205ENST00000598209 ABI3BPQ7Z7G0 1075 aa13.95□□□□□ -0.18
UPF1-205ENST00000598209 PIP4P1Q86T03 277 aa13.95□□□□□ -0.18
UPF1-205ENST00000598209 NT5DC3Q86UY8 548 aa13.95□□□□□ -0.18
UPF1-205ENST00000598209 SPATS2Q86XZ4 545 aaKnown RBP13.95□□□□□ -0.18
UPF1-205ENST00000598209 SYCE1Q8N0S2 351 aa13.95□□□□□ -0.18
UPF1-205ENST00000598209 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.95□□□□□ -0.18
UPF1-205ENST00000598209 DEFB124Q8NES8 71 aa13.95□□□□□ -0.18
UPF1-205ENST00000598209 PDCD6IPQ8WUM4 868 aaKnown RBP13.95□□□□□ -0.18
UPF1-205ENST00000598209 BMFQ96LC9 184 aa13.95□□□□□ -0.18
UPF1-205ENST00000598209 LENG8Q96PV6 779 aaPredicted RBP13.95□□□□□ -0.18
UPF1-205ENST00000598209 KLF6Q99612 283 aaPredicted RBP13.95□□□□□ -0.18
UPF1-205ENST00000598209 SAE1Q9UBE0 346 aaPredicted RBP13.95□□□□□ -0.18
UPF1-205ENST00000598209 AMFRQ9UKV5 643 aa13.95□□□□□ -0.18
UPF1-205ENST00000598209 A0A1B0GTQ1 180 aa13.94□□□□□ -0.18
UPF1-205ENST00000598209 POM121BA6NF01 834 aa13.94□□□□□ -0.18
UPF1-205ENST00000598209 A6NNZ2 444 aa13.94□□□□□ -0.18
UPF1-205ENST00000598209 SH3BP5O60239 455 aa13.94□□□□□ -0.18
UPF1-205ENST00000598209 PECAM1P16284 738 aaPredicted RBP13.94□□□□□ -0.18
UPF1-205ENST00000598209 CES1P23141 567 aa13.94□□□□□ -0.18
UPF1-205ENST00000598209 COPS2P61201 443 aa13.94□□□□□ -0.18
UPF1-205ENST00000598209 IL9RQ01113 521 aa13.94□□□□□ -0.18
UPF1-205ENST00000598209 RALGDSQ12967 914 aa13.94□□□□□ -0.18
UPF1-205ENST00000598209 ZBTB17Q13105 803 aa13.94□□□□□ -0.18
UPF1-205ENST00000598209 PSAPL1Q6NUJ1 521 aa13.94□□□□□ -0.18
UPF1-205ENST00000598209 KYAT3Q6YP21 454 aaKnown RBP13.94□□□□□ -0.18
UPF1-205ENST00000598209 B4GALNT4Q76KP1 1039 aa13.94□□□□□ -0.18
UPF1-205ENST00000598209 PEX26Q7Z412 305 aa13.94□□□□□ -0.18
UPF1-205ENST00000598209 PTAR1Q7Z6K3 402 aaPredicted RBP13.94□□□□□ -0.18
UPF1-205ENST00000598209 LRRC8AQ8IWT6 810 aa13.94□□□□□ -0.18
UPF1-205ENST00000598209 DENND6BQ8NEG7 585 aa13.94□□□□□ -0.18
UPF1-205ENST00000598209 OR13H1Q8NG92 308 aa13.94□□□□□ -0.18
UPF1-205ENST00000598209 FAM174AQ8TBP5 190 aa13.94□□□□□ -0.18
UPF1-205ENST00000598209 SPOCK2Q92563 424 aa13.94□□□□□ -0.18
UPF1-205ENST00000598209 ELF4Q99607 663 aaPredicted RBP13.94□□□□□ -0.18
UPF1-205ENST00000598209 IL12RB2Q99665 862 aa13.94□□□□□ -0.18
UPF1-205ENST00000598209 C1QTNF7Q9BXJ2 289 aa13.94□□□□□ -0.18
UPF1-205ENST00000598209 HEMGNQ9BXL5 484 aa13.94□□□□□ -0.18
UPF1-205ENST00000598209 TSGA10Q9BZW7 698 aa13.94□□□□□ -0.18
UPF1-205ENST00000598209 BRD8Q9H0E9 1235 aa13.94□□□□□ -0.18
UPF1-205ENST00000598209 SLC32A1Q9H598 525 aa13.94□□□□□ -0.18
UPF1-205ENST00000598209 ERVMER34-1Q9H9K5 563 aa13.94□□□□□ -0.18
UPF1-205ENST00000598209 SEPT10Q9P0V9 454 aa13.94□□□□□ -0.18
UPF1-205ENST00000598209 COQ6Q9Y2Z9 468 aa13.94□□□□□ -0.18
UPF1-205ENST00000598209 PCDHB9Q9Y5E1 797 aa13.94□□□□□ -0.18
UPF1-205ENST00000598209 PCDHGB2Q9Y5G2 931 aa13.94□□□□□ -0.18
UPF1-205ENST00000598209 RAI2Q9Y5P3 530 aa13.94□□□□□ -0.18
UPF1-205ENST00000598209 FPGTO14772 594 aa13.93□□□□□ -0.18
UPF1-205ENST00000598209 GIPC1O14908 333 aa13.93□□□□□ -0.18
UPF1-205ENST00000598209 PGLSO95336 258 aa13.93□□□□□ -0.18
UPF1-205ENST00000598209 FTCDO95954 541 aa13.93□□□□□ -0.18
UPF1-205ENST00000598209 C6P13671 934 aa13.93□□□□□ -0.18
UPF1-205ENST00000598209 CEACAM1P13688 526 aa13.93□□□□□ -0.18
UPF1-205ENST00000598209 LIG3P49916 1009 aa13.93□□□□□ -0.18
UPF1-205ENST00000598209 PEX5P50542 639 aa13.93□□□□□ -0.18
UPF1-205ENST00000598209 RWDD2BP57060 319 aa13.93□□□□□ -0.18
UPF1-205ENST00000598209 NIPAL4Q0D2K0 466 aa13.93□□□□□ -0.18
UPF1-205ENST00000598209 IHHQ14623 411 aa13.93□□□□□ -0.18
UPF1-205ENST00000598209 ARMC12Q5T9G4 340 aa13.93□□□□□ -0.18
UPF1-205ENST00000598209 Q6ZSR6 202 aa13.93□□□□□ -0.18
UPF1-205ENST00000598209 DPPA4Q7L190 304 aa13.93□□□□□ -0.18
UPF1-205ENST00000598209 NAXDQ8IW45 347 aa13.93□□□□□ -0.18
UPF1-205ENST00000598209 OXR1Q8N573 874 aa13.93□□□□□ -0.18
UPF1-205ENST00000598209 RNF10Q8N5U6 811 aaKnown RBP13.93□□□□□ -0.18
UPF1-205ENST00000598209 CNTD1Q8N815 330 aa13.93□□□□□ -0.18
UPF1-205ENST00000598209 TP53I13Q8NBR0 393 aaPredicted RBP13.93□□□□□ -0.18
UPF1-205ENST00000598209 ARRDC2Q8TBH0 407 aa13.93□□□□□ -0.18
UPF1-205ENST00000598209 ALG3Q92685 438 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms