RNA–Protein interactions for RNA: ENST00000597288.1

AC009955.2-201, humanhuman

BASIC

Gene AC009955.2, Length 542 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009955.2-201ENST00000597288 CHRNA4P43681 627 aa7.3□□□□□ -1.24
AC009955.2-201ENST00000597288 CLCN4P51793 760 aa7.3□□□□□ -1.24
AC009955.2-201ENST00000597288 KPNA2P52292 529 aaKnown RBP7.3□□□□□ -1.24
AC009955.2-201ENST00000597288 ZNF140P52738 457 aaPredicted RBP7.3□□□□□ -1.24
AC009955.2-201ENST00000597288 SMAD3P84022 425 aaKnown RBP7.3□□□□□ -1.24
AC009955.2-201ENST00000597288 ZXDBP98169 803 aa7.3□□□□□ -1.24
AC009955.2-201ENST00000597288 NFKB2Q00653 900 aa7.3□□□□□ -1.24
AC009955.2-201ENST00000597288 ASPHQ12797 758 aa7.3□□□□□ -1.24
AC009955.2-201ENST00000597288 STX3Q13277 289 aa7.3□□□□□ -1.24
AC009955.2-201ENST00000597288 DMC1Q14565 340 aa7.3□□□□□ -1.24
AC009955.2-201ENST00000597288 POU6F1Q14863 301 aa7.3□□□□□ -1.24
AC009955.2-201ENST00000597288 SETDB1Q15047 1291 aa7.3□□□□□ -1.24
AC009955.2-201ENST00000597288 TAF1AQ15573 450 aaPredicted RBP7.3□□□□□ -1.24
AC009955.2-201ENST00000597288 HSF5Q4G112 596 aaPredicted RBP7.3□□□□□ -1.24
AC009955.2-201ENST00000597288 MPPE1Q53F39 396 aa7.3□□□□□ -1.24
AC009955.2-201ENST00000597288 FASTKD1Q53R41 847 aaKnown RBP7.3□□□□□ -1.24
AC009955.2-201ENST00000597288 TAF1BQ53T94 588 aaPredicted RBP7.3□□□□□ -1.24
AC009955.2-201ENST00000597288 SH2D4BQ5SQS7 431 aa7.3□□□□□ -1.24
AC009955.2-201ENST00000597288 SPOUT1Q5T280 376 aaKnown RBP7.3□□□□□ -1.24
AC009955.2-201ENST00000597288 METTL21CQ5VZV1 264 aa7.3□□□□□ -1.24
AC009955.2-201ENST00000597288 RFWD3Q6PCD5 774 aa7.3□□□□□ -1.24
AC009955.2-201ENST00000597288 CES3Q6UWW8 571 aa7.3□□□□□ -1.24
AC009955.2-201ENST00000597288 ZYG11AQ6WRX3 759 aa7.3□□□□□ -1.24
AC009955.2-201ENST00000597288 FAM47EQ6ZV65 393 aa7.3□□□□□ -1.24
AC009955.2-201ENST00000597288 CRLF3Q8IUI8 442 aa7.3□□□□□ -1.24
AC009955.2-201ENST00000597288 CILP2Q8IUL8 1156 aa7.3□□□□□ -1.24
AC009955.2-201ENST00000597288 CENPLQ8N0S6 344 aaPredicted RBP7.3□□□□□ -1.24
AC009955.2-201ENST00000597288 KREMEN2Q8NCW0 462 aa7.3□□□□□ -1.24
AC009955.2-201ENST00000597288 OR7D4Q8NG98 312 aa7.3□□□□□ -1.24
AC009955.2-201ENST00000597288 PIWIL2Q8TC59 973 aaKnown RBP7.3□□□□□ -1.24
AC009955.2-201ENST00000597288 SPPL3Q8TCT6 385 aa7.3□□□□□ -1.24
AC009955.2-201ENST00000597288 GRIN3AQ8TCU5 1115 aa7.3□□□□□ -1.24
AC009955.2-201ENST00000597288 MAGEC3Q8TD91 643 aa7.3□□□□□ -1.24
AC009955.2-201ENST00000597288 DTX3LQ8TDB6 740 aa7.3□□□□□ -1.24
AC009955.2-201ENST00000597288 WBP2Q969T9 261 aa7.3□□□□□ -1.24
AC009955.2-201ENST00000597288 VOPP1Q96AW1 172 aa7.3□□□□□ -1.24
AC009955.2-201ENST00000597288 OTUB2Q96DC9 234 aa7.3□□□□□ -1.24
AC009955.2-201ENST00000597288 PABPC5Q96DU9 382 aaKnown RBP7.3□□□□□ -1.24
AC009955.2-201ENST00000597288 CCDC126Q96EE4 140 aa7.3□□□□□ -1.24
AC009955.2-201ENST00000597288 TMA16Q96EY4 203 aaKnown RBP7.3□□□□□ -1.24
AC009955.2-201ENST00000597288 TSPAN17Q96FV3 270 aa7.3□□□□□ -1.24
AC009955.2-201ENST00000597288 NSMCE3Q96MG7 304 aa7.3□□□□□ -1.24
AC009955.2-201ENST00000597288 SAMD11Q96NU1 681 aa7.3□□□□□ -1.24
AC009955.2-201ENST00000597288 LYSMD1Q96S90 227 aa7.3□□□□□ -1.24
AC009955.2-201ENST00000597288 SORT1Q99523 831 aa7.3□□□□□ -1.24
AC009955.2-201ENST00000597288 PAIP2Q9BPZ3 127 aaKnown RBP7.3□□□□□ -1.24
AC009955.2-201ENST00000597288 MRPL57Q9BQC6 102 aaKnown RBP7.3□□□□□ -1.24
AC009955.2-201ENST00000597288 APOL2Q9BQE5 337 aa7.3□□□□□ -1.24
AC009955.2-201ENST00000597288 EMILIN2Q9BXX0 1053 aa7.3□□□□□ -1.24
AC009955.2-201ENST00000597288 SLC13A1Q9BZW2 595 aa7.3□□□□□ -1.24
AC009955.2-201ENST00000597288 NACA2Q9H009 215 aa7.3□□□□□ -1.24
AC009955.2-201ENST00000597288 LRMDAQ9H2I8 198 aa7.3□□□□□ -1.24
AC009955.2-201ENST00000597288 NMRAL1Q9HBL8 299 aa7.3□□□□□ -1.24
AC009955.2-201ENST00000597288 GKN1Q9NS71 199 aa7.3□□□□□ -1.24
AC009955.2-201ENST00000597288 INTS10Q9NVR2 710 aaKnown RBP7.3□□□□□ -1.24
AC009955.2-201ENST00000597288 PIH1D1Q9NWS0 290 aaKnown RBP7.3□□□□□ -1.24
AC009955.2-201ENST00000597288 DNAJC28Q9NX36 388 aa7.3□□□□□ -1.24
AC009955.2-201ENST00000597288 MARK1Q9P0L2 795 aa7.3□□□□□ -1.24
AC009955.2-201ENST00000597288 SLC17A6Q9P2U8 582 aa7.3□□□□□ -1.24
AC009955.2-201ENST00000597288 LSM7Q9UK45 103 aaKnown RBP7.3□□□□□ -1.24
AC009955.2-201ENST00000597288 VPS9D1Q9Y2B5 631 aa7.3□□□□□ -1.24
AC009955.2-201ENST00000597288 ACOT9Q9Y305 439 aa7.3□□□□□ -1.24
AC009955.2-201ENST00000597288 COMMD10Q9Y6G5 202 aa7.3□□□□□ -1.24
AC009955.2-201ENST00000597288 ANKRD36A6QL64 1941 aa7.3□□□□□ -1.24
AC009955.2-201ENST00000597288 NOTCH4Q99466 2003 aa7.3□□□□□ -1.24
AC009955.2-201ENST00000597288 MUC3AQ02505 3323 aa7.3□□□□□ -1.24
AC009955.2-201ENST00000597288 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.29□□□□□ -1.24
AC009955.2-201ENST00000597288 FAM95CA0A1B0GW59 222 aa7.29□□□□□ -1.24
AC009955.2-201ENST00000597288 TYW5A2RUC4 315 aaKnown RBP7.29□□□□□ -1.24
AC009955.2-201ENST00000597288 C2orf71A6NGG8 1288 aa7.29□□□□□ -1.24
AC009955.2-201ENST00000597288 CAPN14A8MX76 684 aa7.29□□□□□ -1.24
AC009955.2-201ENST00000597288 F5H423 210 aaPredicted RBP7.29□□□□□ -1.24
AC009955.2-201ENST00000597288 SLCO1B7G3V0H7 640 aa7.29□□□□□ -1.24
AC009955.2-201ENST00000597288 SLC22A2O15244 555 aa7.29□□□□□ -1.24
AC009955.2-201ENST00000597288 MGRN1O60291 552 aa7.29□□□□□ -1.24
AC009955.2-201ENST00000597288 NPHS1O60500 1241 aa7.29□□□□□ -1.24
AC009955.2-201ENST00000597288 CCDC22O60826 627 aa7.29□□□□□ -1.24
AC009955.2-201ENST00000597288 MOSPD3O75425 235 aa7.29□□□□□ -1.24
AC009955.2-201ENST00000597288 LRG1P02750 347 aa7.29□□□□□ -1.24
AC009955.2-201ENST00000597288 SERPINA6P08185 405 aa7.29□□□□□ -1.24
AC009955.2-201ENST00000597288 HMBSP08397 361 aa7.29□□□□□ -1.24
AC009955.2-201ENST00000597288 MBL2P11226 248 aaPredicted RBP7.29□□□□□ -1.24
AC009955.2-201ENST00000597288 RALBP11234 206 aa7.29□□□□□ -1.24
AC009955.2-201ENST00000597288 STMN1P16949 149 aa7.29□□□□□ -1.24
AC009955.2-201ENST00000597288 ADSLP30566 484 aaPredicted RBP7.29□□□□□ -1.24
AC009955.2-201ENST00000597288 RASSF2P50749 326 aa7.29□□□□□ -1.24
AC009955.2-201ENST00000597288 ARFIP2P53365 341 aa7.29□□□□□ -1.24
AC009955.2-201ENST00000597288 TAS2R39P59534 338 aa7.29□□□□□ -1.24
AC009955.2-201ENST00000597288 TMPRSS15P98073 1019 aa7.29□□□□□ -1.24
AC009955.2-201ENST00000597288 FPGSQ05932 587 aa7.29□□□□□ -1.24
AC009955.2-201ENST00000597288 PDAP1Q13442 181 aaKnown RBP7.29□□□□□ -1.24
AC009955.2-201ENST00000597288 TUBB3Q13509 450 aa7.29□□□□□ -1.24
AC009955.2-201ENST00000597288 CAMK2BQ13554 666 aa7.29□□□□□ -1.24
AC009955.2-201ENST00000597288 THOC5Q13769 683 aaKnown RBP7.29□□□□□ -1.24
AC009955.2-201ENST00000597288 CHI3L2Q15782 390 aa7.29□□□□□ -1.24
AC009955.2-201ENST00000597288 TAF12Q16514 161 aa7.29□□□□□ -1.24
AC009955.2-201ENST00000597288 PPM1JQ5JR12 505 aa7.29□□□□□ -1.24
AC009955.2-201ENST00000597288 FAM45BPQ6NSW5 357 aa7.29□□□□□ -1.24
AC009955.2-201ENST00000597288 MRNIPQ6NTE8 343 aa7.29□□□□□ -1.24
AC009955.2-201ENST00000597288 RETSATQ6NUM9 610 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms