RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 UNC80Q8N2C7 3258 aa15.29■□□□□ 0.04
VRK3-207ENST00000594092 IQANK1A0A1B0GTG1 560 aa15.28■□□□□ 0.04
VRK3-207ENST00000594092 TRAFD1O14545 582 aaPredicted RBP15.28■□□□□ 0.04
VRK3-207ENST00000594092 UGT1A9O60656 530 aa15.28■□□□□ 0.04
VRK3-207ENST00000594092 PIRTP0C851 137 aa15.28■□□□□ 0.04
VRK3-207ENST00000594092 ERVK-10P10266 1014 aa15.28■□□□□ 0.04
VRK3-207ENST00000594092 KCNA5P22460 613 aa15.28■□□□□ 0.04
VRK3-207ENST00000594092 GUCY1A3Q02108 690 aa15.28■□□□□ 0.04
VRK3-207ENST00000594092 BCL2L1Q07817 233 aa15.28■□□□□ 0.04
VRK3-207ENST00000594092 MGAT5Q09328 741 aa15.28■□□□□ 0.04
VRK3-207ENST00000594092 SMAD1Q15797 465 aaKnown RBP15.28■□□□□ 0.04
VRK3-207ENST00000594092 CCDC85BQ15834 202 aaPredicted RBP15.28■□□□□ 0.04
VRK3-207ENST00000594092 MYLK3Q32MK0 819 aa15.28■□□□□ 0.04
VRK3-207ENST00000594092 CARD16Q5EG05 197 aa15.28■□□□□ 0.04
VRK3-207ENST00000594092 ESRP1Q6NXG1 681 aaKnown RBP15.28■□□□□ 0.04
VRK3-207ENST00000594092 Q6ZVU0 165 aa15.28■□□□□ 0.04
VRK3-207ENST00000594092 SLC26A11Q86WA9 606 aa15.28■□□□□ 0.04
VRK3-207ENST00000594092 BLOC1S5Q8TDH9 187 aa15.28■□□□□ 0.04
VRK3-207ENST00000594092 FRS2Q8WU20 508 aa15.28■□□□□ 0.04
VRK3-207ENST00000594092 CDKL2Q92772 493 aa15.28■□□□□ 0.04
VRK3-207ENST00000594092 CHFRQ96EP1 664 aa15.28■□□□□ 0.04
VRK3-207ENST00000594092 ADGRE3Q9BY15 652 aa15.28■□□□□ 0.04
VRK3-207ENST00000594092 ATP13A3Q9H7F0 1226 aa15.28■□□□□ 0.04
VRK3-207ENST00000594092 UBE2ZQ9H832 354 aaPredicted RBP15.28■□□□□ 0.04
VRK3-207ENST00000594092 UGT1A7Q9HAW7 530 aa15.28■□□□□ 0.04
VRK3-207ENST00000594092 UGT1A10Q9HAW8 530 aa15.28■□□□□ 0.04
VRK3-207ENST00000594092 UGT1A8Q9HAW9 530 aa15.28■□□□□ 0.04
VRK3-207ENST00000594092 TREX1Q9NSU2 369 aa15.28■□□□□ 0.04
VRK3-207ENST00000594092 PCDHB9Q9Y5E1 797 aa15.28■□□□□ 0.04
VRK3-207ENST00000594092 KIAA1549LQ6ZVL6 1849 aa15.28■□□□□ 0.04
VRK3-207ENST00000594092 MROH6A6NGR9 719 aa15.27■□□□□ 0.04
VRK3-207ENST00000594092 TTC34A8MYJ7 566 aa15.27■□□□□ 0.04
VRK3-207ENST00000594092 FOXO6A8MYZ6 492 aa15.27■□□□□ 0.04
VRK3-207ENST00000594092 ANKRD66B4E2M5 251 aa15.27■□□□□ 0.04
VRK3-207ENST00000594092 HTRA2O43464 458 aaPredicted RBP15.27■□□□□ 0.04
VRK3-207ENST00000594092 BNIP3LO60238 219 aa15.27■□□□□ 0.04
VRK3-207ENST00000594092 PGLSO95336 258 aa15.27■□□□□ 0.04
VRK3-207ENST00000594092 SRPRAP08240 638 aaKnown RBP15.27■□□□□ 0.04
VRK3-207ENST00000594092 BRAFP15056 766 aa15.27■□□□□ 0.04
VRK3-207ENST00000594092 NNMTP40261 264 aa15.27■□□□□ 0.04
VRK3-207ENST00000594092 CCNHP51946 323 aaPredicted RBP15.27■□□□□ 0.04
VRK3-207ENST00000594092 CNGA3Q16281 694 aa15.27■□□□□ 0.04
VRK3-207ENST00000594092 QPCTQ16769 361 aa15.27■□□□□ 0.04
VRK3-207ENST00000594092 ITPRIPL2Q3MIP1 535 aa15.27■□□□□ 0.04
VRK3-207ENST00000594092 TSTD2Q5T7W7 516 aa15.27■□□□□ 0.04
VRK3-207ENST00000594092 ARMC12Q5T9G4 340 aa15.27■□□□□ 0.04
VRK3-207ENST00000594092 TTC19Q6DKK2 380 aaPredicted RBP15.27■□□□□ 0.04
VRK3-207ENST00000594092 DPY19L3Q6ZPD9 716 aa15.27■□□□□ 0.04
VRK3-207ENST00000594092 MARK2Q7KZI7 788 aaKnown RBP15.27■□□□□ 0.04
VRK3-207ENST00000594092 RASSF3Q86WH2 238 aa15.27■□□□□ 0.04
VRK3-207ENST00000594092 PLPP6Q8IY26 295 aa15.27■□□□□ 0.04
VRK3-207ENST00000594092 TERB1Q8NA31 727 aa15.27■□□□□ 0.04
VRK3-207ENST00000594092 BRSK1Q8TDC3 778 aa15.27■□□□□ 0.04
VRK3-207ENST00000594092 SMIM14Q96QK8 99 aa15.27■□□□□ 0.04
VRK3-207ENST00000594092 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.27■□□□□ 0.04
VRK3-207ENST00000594092 SLC17A6Q9P2U8 582 aa15.27■□□□□ 0.04
VRK3-207ENST00000594092 ZNF180Q9UJW8 692 aa15.27■□□□□ 0.04
VRK3-207ENST00000594092 SPO11Q9Y5K1 396 aa15.27■□□□□ 0.04
VRK3-207ENST00000594092 LDB2O43679 373 aa15.27■□□□□ 0.03
VRK3-207ENST00000594092 SOCS5O75159 536 aa15.27■□□□□ 0.03
VRK3-207ENST00000594092 FAM155BO75949 473 aa15.27■□□□□ 0.03
VRK3-207ENST00000594092 PAPSS2O95340 614 aaPredicted RBP15.27■□□□□ 0.03
VRK3-207ENST00000594092 CHN1P15882 459 aa15.27■□□□□ 0.03
VRK3-207ENST00000594092 EIF2DP41214 584 aaKnown RBP15.27■□□□□ 0.03
VRK3-207ENST00000594092 SMAD4Q13485 552 aaKnown RBP15.27■□□□□ 0.03
VRK3-207ENST00000594092 NAB1Q13506 487 aa15.27■□□□□ 0.03
VRK3-207ENST00000594092 EIF4HQ15056 248 aaKnown RBP15.27■□□□□ 0.03
VRK3-207ENST00000594092 LGSNQ5TDP6 509 aa15.27■□□□□ 0.03
VRK3-207ENST00000594092 KCNMB4Q86W47 210 aa15.27■□□□□ 0.03
VRK3-207ENST00000594092 SFTPA1Q8IWL2 248 aa15.27■□□□□ 0.03
VRK3-207ENST00000594092 OR2A12Q8NGT7 310 aa15.27■□□□□ 0.03
VRK3-207ENST00000594092 PIH1D2Q8WWB5 315 aa15.27■□□□□ 0.03
VRK3-207ENST00000594092 TUBGCP5Q96RT8 1024 aa15.27■□□□□ 0.03
VRK3-207ENST00000594092 SMC6Q96SB8 1091 aa15.27■□□□□ 0.03
VRK3-207ENST00000594092 TRABDQ9H4I3 376 aa15.27■□□□□ 0.03
VRK3-207ENST00000594092 KCNK9Q9NPC2 374 aa15.27■□□□□ 0.03
VRK3-207ENST00000594092 C20orf96Q9NUD7 363 aaPredicted RBP15.27■□□□□ 0.03
VRK3-207ENST00000594092 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.27■□□□□ 0.03
VRK3-207ENST00000594092 KCTD3Q9Y597 815 aa15.27■□□□□ 0.03
VRK3-207ENST00000594092 ARL5AQ9Y689 179 aa15.27■□□□□ 0.03
VRK3-207ENST00000594092 C2CD4DB7Z1M9 353 aa15.26■□□□□ 0.03
VRK3-207ENST00000594092 MBTPS2O43462 519 aa15.26■□□□□ 0.03
VRK3-207ENST00000594092 TIMM44O43615 452 aa15.26■□□□□ 0.03
VRK3-207ENST00000594092 POP4O95707 220 aaKnown RBP15.26■□□□□ 0.03
VRK3-207ENST00000594092 BMP1P13497 986 aa15.26■□□□□ 0.03
VRK3-207ENST00000594092 ARNTP27540 789 aa15.26■□□□□ 0.03
VRK3-207ENST00000594092 SERPINA4P29622 427 aa15.26■□□□□ 0.03
VRK3-207ENST00000594092 SLC8A1P32418 973 aa15.26■□□□□ 0.03
VRK3-207ENST00000594092 ARCN1P48444 511 aaKnown RBP15.26■□□□□ 0.03
VRK3-207ENST00000594092 PPARDQ03181 441 aa15.26■□□□□ 0.03
VRK3-207ENST00000594092 SKIV2LQ15477 1246 aaKnown RBP15.26■□□□□ 0.03
VRK3-207ENST00000594092 HSP90AA5PQ58FG0 334 aa15.26■□□□□ 0.03
VRK3-207ENST00000594092 PDPK2PQ6A1A2 396 aa15.26■□□□□ 0.03
VRK3-207ENST00000594092 KIAA0930Q6ICG6 404 aaPredicted RBP15.26■□□□□ 0.03
VRK3-207ENST00000594092 Q7L0L9 218 aa15.26■□□□□ 0.03
VRK3-207ENST00000594092 NLRP9Q7RTR0 991 aa15.26■□□□□ 0.03
VRK3-207ENST00000594092 CHST14Q8NCH0 376 aa15.26■□□□□ 0.03
VRK3-207ENST00000594092 MDM1Q8TC05 714 aa15.26■□□□□ 0.03
VRK3-207ENST00000594092 CDX2Q99626 313 aaPredicted RBP15.26■□□□□ 0.03
VRK3-207ENST00000594092 CPEB1Q9BZB8 566 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms