RNA–Protein interactions for RNA: ENST00000594090.5

VRK3-206, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best)

Gene VRK3, Length 1,448 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-206ENST00000594090 DNAH14Q0VDD8 3507 aa14.67□□□□□ -0.06
VRK3-206ENST00000594090 A0A1W2PQ67 120 aa14.66□□□□□ -0.06
VRK3-206ENST00000594090 DCDC2BA2VCK2 349 aa14.66□□□□□ -0.06
VRK3-206ENST00000594090 TLR4O00206 839 aa14.66□□□□□ -0.06
VRK3-206ENST00000594090 RIOK3O14730 519 aaKnown RBP14.66□□□□□ -0.06
VRK3-206ENST00000594090 RAD51BO15315 384 aa14.66□□□□□ -0.06
VRK3-206ENST00000594090 NRDCO43847 1150 aa14.66□□□□□ -0.06
VRK3-206ENST00000594090 PAK4O96013 591 aaPredicted RBP14.66□□□□□ -0.06
VRK3-206ENST00000594090 CPP00450 1065 aa14.66□□□□□ -0.06
VRK3-206ENST00000594090 PRKCGP05129 697 aa14.66□□□□□ -0.06
VRK3-206ENST00000594090 CCDC175P0C221 793 aa14.66□□□□□ -0.06
VRK3-206ENST00000594090 MMP12P39900 470 aa14.66□□□□□ -0.06
VRK3-206ENST00000594090 POLR2LP62875 67 aaKnown RBP14.66□□□□□ -0.06
VRK3-206ENST00000594090 DSC2Q02487 901 aa14.66□□□□□ -0.06
VRK3-206ENST00000594090 OVGP1Q12889 678 aa14.66□□□□□ -0.06
VRK3-206ENST00000594090 PRKD1Q15139 912 aaPredicted RBP14.66□□□□□ -0.06
VRK3-206ENST00000594090 GCNT7Q6ZNI0 430 aa14.66□□□□□ -0.06
VRK3-206ENST00000594090 BBS12Q6ZW61 710 aa14.66□□□□□ -0.06
VRK3-206ENST00000594090 IQCHQ86VS3 1027 aa14.66□□□□□ -0.06
VRK3-206ENST00000594090 UBL4BQ8N7F7 174 aa14.66□□□□□ -0.06
VRK3-206ENST00000594090 PDCD6IPQ8WUM4 868 aaKnown RBP14.66□□□□□ -0.06
VRK3-206ENST00000594090 ASB12Q8WXK4 309 aa14.66□□□□□ -0.06
VRK3-206ENST00000594090 P3H4Q92791 437 aa14.66□□□□□ -0.06
VRK3-206ENST00000594090 HAUS1Q96CS2 278 aa14.66□□□□□ -0.06
VRK3-206ENST00000594090 IL12RB2Q99665 862 aa14.66□□□□□ -0.06
VRK3-206ENST00000594090 HEMGNQ9BXL5 484 aa14.66□□□□□ -0.06
VRK3-206ENST00000594090 GUCA1BQ9UMX6 200 aa14.66□□□□□ -0.06
VRK3-206ENST00000594090 EFR3BQ9Y2G0 817 aa14.66□□□□□ -0.06
VRK3-206ENST00000594090 FNDC3AQ9Y2H6 1198 aaKnown RBP14.66□□□□□ -0.06
VRK3-206ENST00000594090 MIF4GDA9UHW6 222 aaKnown RBP14.66□□□□□ -0.06
VRK3-206ENST00000594090 H0Y8X5 98 aa14.66□□□□□ -0.06
VRK3-206ENST00000594090 MAGEC1O60732 1142 aa14.66□□□□□ -0.06
VRK3-206ENST00000594090 MMP20O60882 483 aa14.66□□□□□ -0.06
VRK3-206ENST00000594090 TM7SF2O76062 418 aa14.66□□□□□ -0.06
VRK3-206ENST00000594090 PGLSO95336 258 aa14.66□□□□□ -0.06
VRK3-206ENST00000594090 JCHAINP01591 159 aa14.66□□□□□ -0.06
VRK3-206ENST00000594090 ZNF883P0CG24 379 aa14.66□□□□□ -0.06
VRK3-206ENST00000594090 CES1P23141 567 aa14.66□□□□□ -0.06
VRK3-206ENST00000594090 CLDN2P57739 230 aa14.66□□□□□ -0.06
VRK3-206ENST00000594090 NXPH1P58417 271 aa14.66□□□□□ -0.06
VRK3-206ENST00000594090 SEMG2Q02383 582 aa14.66□□□□□ -0.06
VRK3-206ENST00000594090 RALGDSQ12967 914 aa14.66□□□□□ -0.06
VRK3-206ENST00000594090 SGCGQ13326 291 aa14.66□□□□□ -0.06
VRK3-206ENST00000594090 ZNF423Q2M1K9 1284 aa14.66□□□□□ -0.06
VRK3-206ENST00000594090 KYAT3Q6YP21 454 aaKnown RBP14.66□□□□□ -0.06
VRK3-206ENST00000594090 ZNF662Q6ZS27 426 aa14.66□□□□□ -0.06
VRK3-206ENST00000594090 B4GALNT4Q76KP1 1039 aa14.66□□□□□ -0.06
VRK3-206ENST00000594090 DGLUCYQ7Z3D6 616 aa14.66□□□□□ -0.06
VRK3-206ENST00000594090 ABI3BPQ7Z7G0 1075 aa14.66□□□□□ -0.06
VRK3-206ENST00000594090 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.66□□□□□ -0.06
VRK3-206ENST00000594090 CNTD1Q8N815 330 aa14.66□□□□□ -0.06
VRK3-206ENST00000594090 DENND6BQ8NEG7 585 aa14.66□□□□□ -0.06
VRK3-206ENST00000594090 ARRDC2Q8TBH0 407 aa14.66□□□□□ -0.06
VRK3-206ENST00000594090 TFB1MQ8WVM0 346 aaKnown RBP14.66□□□□□ -0.06
VRK3-206ENST00000594090 LENG8Q96PV6 779 aaPredicted RBP14.66□□□□□ -0.06
VRK3-206ENST00000594090 KLF6Q99612 283 aaPredicted RBP14.66□□□□□ -0.06
VRK3-206ENST00000594090 HERPUD2Q9BSE4 406 aa14.66□□□□□ -0.06
VRK3-206ENST00000594090 CEP41Q9BYV8 373 aa14.66□□□□□ -0.06
VRK3-206ENST00000594090 OSBPL8Q9BZF1 889 aa14.66□□□□□ -0.06
VRK3-206ENST00000594090 GDF3Q9NR23 364 aa14.66□□□□□ -0.06
VRK3-206ENST00000594090 SEPT10Q9P0V9 454 aa14.66□□□□□ -0.06
VRK3-206ENST00000594090 PCDHB9Q9Y5E1 797 aa14.66□□□□□ -0.06
VRK3-206ENST00000594090 RAI2Q9Y5P3 530 aa14.66□□□□□ -0.06
VRK3-206ENST00000594090 LRRK1Q38SD2 2015 aa14.65□□□□□ -0.06
VRK3-206ENST00000594090 A6NNZ2 444 aa14.65□□□□□ -0.06
VRK3-206ENST00000594090 APOC4-APOC2K7ER74 178 aa14.65□□□□□ -0.06
VRK3-206ENST00000594090 KCNK3O14649 394 aa14.65□□□□□ -0.06
VRK3-206ENST00000594090 DDX3YO15523 660 aaKnown RBP14.65□□□□□ -0.06
VRK3-206ENST00000594090 APOC2P02655 101 aa14.65□□□□□ -0.06
VRK3-206ENST00000594090 PYGMP11217 842 aa14.65□□□□□ -0.06
VRK3-206ENST00000594090 C6P13671 934 aa14.65□□□□□ -0.06
VRK3-206ENST00000594090 CD59P13987 128 aa14.65□□□□□ -0.06
VRK3-206ENST00000594090 FAM193AP78312 1265 aa14.65□□□□□ -0.06
VRK3-206ENST00000594090 NIPAL4Q0D2K0 466 aa14.65□□□□□ -0.06
VRK3-206ENST00000594090 SLC14A1Q13336 389 aa14.65□□□□□ -0.06
VRK3-206ENST00000594090 IHHQ14623 411 aa14.65□□□□□ -0.06
VRK3-206ENST00000594090 ARMC12Q5T9G4 340 aa14.65□□□□□ -0.06
VRK3-206ENST00000594090 AADACL2Q6P093 401 aa14.65□□□□□ -0.06
VRK3-206ENST00000594090 DPPA4Q7L190 304 aa14.65□□□□□ -0.06
VRK3-206ENST00000594090 ZC3H18Q86VM9 953 aaKnown RBP14.65□□□□□ -0.06
VRK3-206ENST00000594090 SPATS2Q86XZ4 545 aaKnown RBP14.65□□□□□ -0.06
VRK3-206ENST00000594090 FAM174AQ8TBP5 190 aa14.65□□□□□ -0.06
VRK3-206ENST00000594090 KLHDC7BQ96G42 594 aa14.65□□□□□ -0.06
VRK3-206ENST00000594090 HES6Q96HZ4 224 aa14.65□□□□□ -0.06
VRK3-206ENST00000594090 BMFQ96LC9 184 aa14.65□□□□□ -0.06
VRK3-206ENST00000594090 C1QTNF7Q9BXJ2 289 aa14.65□□□□□ -0.06
VRK3-206ENST00000594090 TM7SF3Q9NS93 570 aa14.65□□□□□ -0.06
VRK3-206ENST00000594090 COQ6Q9Y2Z9 468 aa14.65□□□□□ -0.06
VRK3-206ENST00000594090 HS3ST3A1Q9Y663 406 aa14.65□□□□□ -0.06
VRK3-206ENST00000594090 CEP250Q9BV73 2442 aa14.64□□□□□ -0.07
VRK3-206ENST00000594090 POM121BA6NF01 834 aa14.64□□□□□ -0.07
VRK3-206ENST00000594090 THEGLP0DJG4 465 aa14.64□□□□□ -0.07
VRK3-206ENST00000594090 IGFALSP35858 605 aa14.64□□□□□ -0.07
VRK3-206ENST00000594090 CETN2P41208 172 aa14.64□□□□□ -0.07
VRK3-206ENST00000594090 LIG3P49916 1009 aa14.64□□□□□ -0.07
VRK3-206ENST00000594090 CCT8P50990 548 aa14.64□□□□□ -0.07
VRK3-206ENST00000594090 ZNF211Q13398 564 aaPredicted RBP14.64□□□□□ -0.07
VRK3-206ENST00000594090 NOMO1Q15155 1222 aa14.64□□□□□ -0.07
VRK3-206ENST00000594090 FAM182AQ5T1J6 154 aa14.64□□□□□ -0.07
VRK3-206ENST00000594090 CCDC181Q5TID7 509 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms