RNA–Protein interactions for RNA: ENST00000593818.5

IRF3-206, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 924 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-206ENST00000593818 AMFRQ9UKV5 643 aa12.61□□□□□ -0.39
IRF3-206ENST00000593818 INTS6Q9UL03 887 aaKnown RBP12.61□□□□□ -0.39
IRF3-206ENST00000593818 ATXN7L1Q9ULK2 861 aaPredicted RBP12.61□□□□□ -0.39
IRF3-206ENST00000593818 MFHAS1Q9Y4C4 1052 aa12.61□□□□□ -0.39
IRF3-206ENST00000593818 SPENQ96T58 3664 aaKnown RBP12.6□□□□□ -0.39
IRF3-206ENST00000593818 DDX3YO15523 660 aaKnown RBP12.6□□□□□ -0.39
IRF3-206ENST00000593818 RHOQP17081 205 aa12.6□□□□□ -0.39
IRF3-206ENST00000593818 AMPD1P23109 780 aa12.6□□□□□ -0.39
IRF3-206ENST00000593818 IL4RP24394 825 aa12.6□□□□□ -0.39
IRF3-206ENST00000593818 HTR7P34969 479 aa12.6□□□□□ -0.39
IRF3-206ENST00000593818 ARL4AP40617 200 aa12.6□□□□□ -0.39
IRF3-206ENST00000593818 HCAR3P49019 387 aa12.6□□□□□ -0.39
IRF3-206ENST00000593818 PEX5P50542 639 aa12.6□□□□□ -0.39
IRF3-206ENST00000593818 DNA2P51530 1060 aa12.6□□□□□ -0.39
IRF3-206ENST00000593818 ST8SIA6P61647 398 aa12.6□□□□□ -0.39
IRF3-206ENST00000593818 DPYSQ14117 519 aa12.6□□□□□ -0.39
IRF3-206ENST00000593818 PDK2Q15119 407 aa12.6□□□□□ -0.39
IRF3-206ENST00000593818 C3orf38Q5JPI3 329 aa12.6□□□□□ -0.39
IRF3-206ENST00000593818 TRIM69Q86WT6 500 aa12.6□□□□□ -0.39
IRF3-206ENST00000593818 RTL3Q8N8U3 475 aaKnown RBP12.6□□□□□ -0.39
IRF3-206ENST00000593818 TMEM145Q8NBT3 493 aa12.6□□□□□ -0.39
IRF3-206ENST00000593818 TRIM58Q8NG06 486 aa12.6□□□□□ -0.39
IRF3-206ENST00000593818 OR14C36Q8NHC7 312 aa12.6□□□□□ -0.39
IRF3-206ENST00000593818 FIBINQ8TAL6 211 aa12.6□□□□□ -0.39
IRF3-206ENST00000593818 RNF25Q96BH1 459 aaPredicted RBP12.6□□□□□ -0.39
IRF3-206ENST00000593818 SEMA3CQ99985 751 aa12.6□□□□□ -0.39
IRF3-206ENST00000593818 KDM4CQ9H3R0 1056 aa12.6□□□□□ -0.39
IRF3-206ENST00000593818 ETNK2Q9NVF9 386 aa12.6□□□□□ -0.39
IRF3-206ENST00000593818 TMEM248Q9NWD8 314 aa12.6□□□□□ -0.39
IRF3-206ENST00000593818 UCKL1Q9NWZ5 548 aa12.6□□□□□ -0.39
IRF3-206ENST00000593818 DDX56Q9NY93 547 aaKnown RBP12.6□□□□□ -0.39
IRF3-206ENST00000593818 NLGN3Q9NZ94 848 aa12.6□□□□□ -0.39
IRF3-206ENST00000593818 DNAI1Q9UI46 699 aa12.6□□□□□ -0.39
IRF3-206ENST00000593818 PCDHA3Q9Y5H8 950 aa12.6□□□□□ -0.39
IRF3-206ENST00000593818 CREBBPQ92793 2442 aa12.6□□□□□ -0.39
IRF3-206ENST00000593818 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.59□□□□□ -0.39
IRF3-206ENST00000593818 EDDM13A0A1B0GTR0 161 aa12.59□□□□□ -0.39
IRF3-206ENST00000593818 CCDC66A2RUB6 948 aa12.59□□□□□ -0.39
IRF3-206ENST00000593818 GOLGA6L9A6NEM1 432 aa12.59□□□□□ -0.39
IRF3-206ENST00000593818 MIF4GDA9UHW6 222 aaKnown RBP12.59□□□□□ -0.39
IRF3-206ENST00000593818 FGF10O15520 208 aaPredicted RBP12.59□□□□□ -0.39
IRF3-206ENST00000593818 SLC7A4O43246 635 aa12.59□□□□□ -0.39
IRF3-206ENST00000593818 EFSO43281 561 aa12.59□□□□□ -0.39
IRF3-206ENST00000593818 DAPK3O43293 454 aa12.59□□□□□ -0.39
IRF3-206ENST00000593818 PIAS2O75928 621 aa12.59□□□□□ -0.39
IRF3-206ENST00000593818 ITGB2P05107 769 aa12.59□□□□□ -0.39
IRF3-206ENST00000593818 ERCC2P18074 760 aa12.59□□□□□ -0.39
IRF3-206ENST00000593818 MZF1P28698 734 aaPredicted RBP12.59□□□□□ -0.39
IRF3-206ENST00000593818 RBMS1P29558 406 aaKnown RBP12.59□□□□□ -0.39
IRF3-206ENST00000593818 OR1E1P30953 314 aa12.59□□□□□ -0.39
IRF3-206ENST00000593818 CSKP41240 450 aa12.59□□□□□ -0.39
IRF3-206ENST00000593818 PSMD8P48556 350 aa12.59□□□□□ -0.39
IRF3-206ENST00000593818 ZNF135P52742 658 aaPredicted RBP12.59□□□□□ -0.39
IRF3-206ENST00000593818 NFKB2Q00653 900 aa12.59□□□□□ -0.39
IRF3-206ENST00000593818 ZNF177Q13360 481 aaPredicted RBP12.59□□□□□ -0.39
IRF3-206ENST00000593818 HS1BP3Q53T59 392 aa12.59□□□□□ -0.39
IRF3-206ENST00000593818 ANKRD20A8PQ5CZ79 823 aa12.59□□□□□ -0.39
IRF3-206ENST00000593818 MEI1Q5TIA1 1274 aa12.59□□□□□ -0.39
IRF3-206ENST00000593818 RNF219Q5W0B1 726 aaPredicted RBP12.59□□□□□ -0.39
IRF3-206ENST00000593818 MFSD7Q6UXD7 560 aa12.59□□□□□ -0.39
IRF3-206ENST00000593818 PRPF39Q86UA1 669 aaKnown RBP12.59□□□□□ -0.39
IRF3-206ENST00000593818 CCDC117Q8IWD4 279 aaPredicted RBP12.59□□□□□ -0.39
IRF3-206ENST00000593818 NETO2Q8NC67 525 aa12.59□□□□□ -0.39
IRF3-206ENST00000593818 PCDH19Q8TAB3 1148 aa12.59□□□□□ -0.39
IRF3-206ENST00000593818 FAF2Q96CS3 445 aa12.59□□□□□ -0.39
IRF3-206ENST00000593818 TRIM44Q96DX7 344 aaPredicted RBP12.59□□□□□ -0.39
IRF3-206ENST00000593818 HES6Q96HZ4 224 aa12.59□□□□□ -0.39
IRF3-206ENST00000593818 APOLD1Q96LR9 279 aa12.59□□□□□ -0.39
IRF3-206ENST00000593818 CCNL2Q96S94 520 aaPredicted RBP12.59□□□□□ -0.39
IRF3-206ENST00000593818 ZNF670Q9BS34 389 aa12.59□□□□□ -0.39
IRF3-206ENST00000593818 KCND1Q9NSA2 647 aa12.59□□□□□ -0.39
IRF3-206ENST00000593818 RCOR3Q9P2K3 495 aaPredicted RBP12.59□□□□□ -0.39
IRF3-206ENST00000593818 TBC1D30Q9Y2I9 924 aa12.59□□□□□ -0.39
IRF3-206ENST00000593818 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.59□□□□□ -0.39
IRF3-206ENST00000593818 ENTPD2Q9Y5L3 495 aa12.59□□□□□ -0.39
IRF3-206ENST00000593818 ITPR2Q14571 2701 aa12.59□□□□□ -0.39
IRF3-206ENST00000593818 TTC34A8MYJ7 566 aa12.58□□□□□ -0.4
IRF3-206ENST00000593818 PRAMEF26H0Y7S4 382 aa12.58□□□□□ -0.4
IRF3-206ENST00000593818 PLRG1O43660 514 aaKnown RBP12.58□□□□□ -0.4
IRF3-206ENST00000593818 KIF5CO60282 957 aa12.58□□□□□ -0.4
IRF3-206ENST00000593818 RHOCP08134 193 aa12.58□□□□□ -0.4
IRF3-206ENST00000593818 SRPRAP08240 638 aaKnown RBP12.58□□□□□ -0.4
IRF3-206ENST00000593818 CDKN2BP42772 138 aa12.58□□□□□ -0.4
IRF3-206ENST00000593818 MAPKAPK2P49137 400 aa12.58□□□□□ -0.4
IRF3-206ENST00000593818 RWDD2BP57060 319 aa12.58□□□□□ -0.4
IRF3-206ENST00000593818 UBAP2LQ14157 1087 aaKnown RBP12.58□□□□□ -0.4
IRF3-206ENST00000593818 ELAVL3Q14576 367 aaKnown RBP12.58□□□□□ -0.4
IRF3-206ENST00000593818 LLGL1Q15334 1064 aa12.58□□□□□ -0.4
IRF3-206ENST00000593818 ZNF569Q5MCW4 686 aa12.58□□□□□ -0.4
IRF3-206ENST00000593818 AADACL2Q6P093 401 aa12.58□□□□□ -0.4
IRF3-206ENST00000593818 SPOCD1Q6ZMY3 1216 aa12.58□□□□□ -0.4
IRF3-206ENST00000593818 CCDC50Q8IVM0 306 aa12.58□□□□□ -0.4
IRF3-206ENST00000593818 MAP7D3Q8IWC1 876 aa12.58□□□□□ -0.4
IRF3-206ENST00000593818 APCDD1Q8J025 514 aa12.58□□□□□ -0.4
IRF3-206ENST00000593818 SLC35F6Q8N357 371 aa12.58□□□□□ -0.4
IRF3-206ENST00000593818 NPWQ8N729 165 aa12.58□□□□□ -0.4
IRF3-206ENST00000593818 PQLC3Q8N755 202 aa12.58□□□□□ -0.4
IRF3-206ENST00000593818 UBL4BQ8N7F7 174 aa12.58□□□□□ -0.4
IRF3-206ENST00000593818 OR7D4Q8NG98 312 aa12.58□□□□□ -0.4
IRF3-206ENST00000593818 EXD1Q8NHP7 514 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms