RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 NFATC4Q14934 902 aa22.85■■□□□ 1.25
SSBP4-203ENST00000593641 CYTH1Q15438 398 aa22.85■■□□□ 1.25
SSBP4-203ENST00000593641 ALG11Q2TAA5 492 aa22.85■■□□□ 1.25
SSBP4-203ENST00000593641 WSCD2Q2TBF2 565 aa22.85■■□□□ 1.25
SSBP4-203ENST00000593641 DCUN1D2Q6PH85 259 aa22.85■■□□□ 1.25
SSBP4-203ENST00000593641 RD3Q7Z3Z2 195 aa22.85■■□□□ 1.25
SSBP4-203ENST00000593641 GKN2Q86XP6 184 aa22.85■■□□□ 1.25
SSBP4-203ENST00000593641 SDR16C5Q8N3Y7 309 aa22.85■■□□□ 1.25
SSBP4-203ENST00000593641 KYQ8NBH2 561 aa22.85■■□□□ 1.25
SSBP4-203ENST00000593641 TSACCQ96A04 125 aaPredicted RBP22.85■■□□□ 1.25
SSBP4-203ENST00000593641 CNPY3Q9BT09 278 aa22.85■■□□□ 1.25
SSBP4-203ENST00000593641 PCDH12Q9NPG4 1184 aa22.85■■□□□ 1.25
SSBP4-203ENST00000593641 FANCLQ9NW38 375 aa22.85■■□□□ 1.25
SSBP4-203ENST00000593641 KLQ9UEF7 1012 aa22.85■■□□□ 1.25
SSBP4-203ENST00000593641 SETXQ7Z333 2677 aaKnown RBP22.85■■□□□ 1.25
SSBP4-203ENST00000593641 TSPAN11A1L157 253 aa22.84■■□□□ 1.25
SSBP4-203ENST00000593641 TNFSF15O95150 251 aa22.84■■□□□ 1.25
SSBP4-203ENST00000593641 ZIC2O95409 532 aaPredicted RBP22.84■■□□□ 1.25
SSBP4-203ENST00000593641 HTR7P34969 479 aa22.84■■□□□ 1.25
SSBP4-203ENST00000593641 PDX1P52945 283 aa22.84■■□□□ 1.25
SSBP4-203ENST00000593641 RPL7AP62424 266 aaKnown RBP22.84■■□□□ 1.25
SSBP4-203ENST00000593641 SKOR1P84550 965 aa22.84■■□□□ 1.25
SSBP4-203ENST00000593641 TCEA2Q15560 299 aa22.84■■□□□ 1.25
SSBP4-203ENST00000593641 BRAT1Q6PJG6 821 aa22.84■■□□□ 1.25
SSBP4-203ENST00000593641 ZNF641Q96N77 438 aaPredicted RBP22.84■■□□□ 1.25
SSBP4-203ENST00000593641 AGPAT1Q99943 283 aa22.84■■□□□ 1.25
SSBP4-203ENST00000593641 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP22.84■■□□□ 1.25
SSBP4-203ENST00000593641 APOOQ9BUR5 198 aa22.84■■□□□ 1.25
SSBP4-203ENST00000593641 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.84■■□□□ 1.25
SSBP4-203ENST00000593641 ARHGEF17Q96PE2 2063 aaPredicted RBP22.83■■□□□ 1.25
SSBP4-203ENST00000593641 TCRBV5S1A1TA0A578 114 aa22.83■■□□□ 1.25
SSBP4-203ENST00000593641 LGALS16A8MUM7 142 aa22.83■■□□□ 1.25
SSBP4-203ENST00000593641 PCCBP05166 539 aa22.83■■□□□ 1.25
SSBP4-203ENST00000593641 ITGA2BP08514 1039 aa22.83■■□□□ 1.25
SSBP4-203ENST00000593641 LIG3P49916 1009 aa22.83■■□□□ 1.25
SSBP4-203ENST00000593641 INPP5AQ14642 412 aa22.83■■□□□ 1.25
SSBP4-203ENST00000593641 CLEC14AQ86T13 490 aa22.83■■□□□ 1.25
SSBP4-203ENST00000593641 OR6C4Q8NGE1 309 aa22.83■■□□□ 1.25
SSBP4-203ENST00000593641 SNRNP27Q8WVK2 155 aaKnown RBP22.83■■□□□ 1.25
SSBP4-203ENST00000593641 CCDC74AQ96AQ1 378 aa22.83■■□□□ 1.25
SSBP4-203ENST00000593641 LIN37Q96GY3 246 aaPredicted RBP22.83■■□□□ 1.25
SSBP4-203ENST00000593641 TUBGCP5Q96RT8 1024 aa22.83■■□□□ 1.25
SSBP4-203ENST00000593641 LRRC19Q9H756 370 aa22.83■■□□□ 1.25
SSBP4-203ENST00000593641 PDFQ9HBH1 243 aa22.83■■□□□ 1.25
SSBP4-203ENST00000593641 GPR34Q9UPC5 381 aa22.83■■□□□ 1.25
SSBP4-203ENST00000593641 ATP8A1Q9Y2Q0 1164 aa22.83■■□□□ 1.25
SSBP4-203ENST00000593641 OR1A2Q9Y585 309 aa22.83■■□□□ 1.25
SSBP4-203ENST00000593641 PMS2P1A4D2B8 440 aa22.82■■□□□ 1.24
SSBP4-203ENST00000593641 NTN3O00634 580 aaPredicted RBP22.82■■□□□ 1.24
SSBP4-203ENST00000593641 CASC3O15234 703 aaKnown RBP22.82■■□□□ 1.24
SSBP4-203ENST00000593641 CCDC172P0C7W6 258 aa22.82■■□□□ 1.24
SSBP4-203ENST00000593641 MMP12P39900 470 aa22.82■■□□□ 1.24
SSBP4-203ENST00000593641 NDST2P52849 883 aa22.82■■□□□ 1.24
SSBP4-203ENST00000593641 SRP54P61011 504 aaKnown RBP22.82■■□□□ 1.24
SSBP4-203ENST00000593641 UBXN1Q04323 297 aa22.82■■□□□ 1.24
SSBP4-203ENST00000593641 EIF3IQ13347 325 aaKnown RBP22.82■■□□□ 1.24
SSBP4-203ENST00000593641 MTM1Q13496 603 aa22.82■■□□□ 1.24
SSBP4-203ENST00000593641 PPP1R15BQ5SWA1 713 aa22.82■■□□□ 1.24
SSBP4-203ENST00000593641 PAF1Q8N7H5 531 aa22.82■■□□□ 1.24
SSBP4-203ENST00000593641 CELF6Q96J87 481 aaKnown RBP22.82■■□□□ 1.24
SSBP4-203ENST00000593641 WDR92Q96MX6 357 aa22.82■■□□□ 1.24
SSBP4-203ENST00000593641 GFM1Q96RP9 751 aaKnown RBP22.82■■□□□ 1.24
SSBP4-203ENST00000593641 STRADBQ9C0K7 418 aa22.82■■□□□ 1.24
SSBP4-203ENST00000593641 ATP13A3Q9H7F0 1226 aa22.82■■□□□ 1.24
SSBP4-203ENST00000593641 EPB41L5Q9HCM4 733 aa22.82■■□□□ 1.24
SSBP4-203ENST00000593641 LIMA1Q9UHB6 759 aaKnown RBP22.82■■□□□ 1.24
SSBP4-203ENST00000593641 SSUH2Q9Y2M2 353 aa22.82■■□□□ 1.24
SSBP4-203ENST00000593641 PIEZO2Q9H5I5 2752 aa22.82■■□□□ 1.24
SSBP4-203ENST00000593641 ARHGAP42A6NI28 874 aa22.81■■□□□ 1.24
SSBP4-203ENST00000593641 TMX2-CTNND1H3BSU7 103 aa22.81■■□□□ 1.24
SSBP4-203ENST00000593641 J3KR12 359 aa22.81■■□□□ 1.24
SSBP4-203ENST00000593641 PRAMEF11O60813 436 aa22.81■■□□□ 1.24
SSBP4-203ENST00000593641 SERPINA4P29622 427 aa22.81■■□□□ 1.24
SSBP4-203ENST00000593641 AGERQ15109 404 aa22.81■■□□□ 1.24
SSBP4-203ENST00000593641 CCDC81Q6ZN84 652 aa22.81■■□□□ 1.24
SSBP4-203ENST00000593641 CAMK1DQ8IU85 385 aa22.81■■□□□ 1.24
SSBP4-203ENST00000593641 AP4E1Q9UPM8 1137 aa22.81■■□□□ 1.24
SSBP4-203ENST00000593641 D6RAR5 112 aa22.8■■□□□ 1.24
SSBP4-203ENST00000593641 K7ENP7 123 aa22.8■■□□□ 1.24
SSBP4-203ENST00000593641 EEF2KO00418 725 aaKnown RBP22.8■■□□□ 1.24
SSBP4-203ENST00000593641 PLD2O14939 933 aa22.8■■□□□ 1.24
SSBP4-203ENST00000593641 PALMO75781 387 aa22.8■■□□□ 1.24
SSBP4-203ENST00000593641 TNFP01375 233 aa22.8■■□□□ 1.24
SSBP4-203ENST00000593641 RPLP0P05388 317 aaKnown RBP22.8■■□□□ 1.24
SSBP4-203ENST00000593641 MYL5Q02045 173 aa22.8■■□□□ 1.24
SSBP4-203ENST00000593641 CLN3Q13286 438 aa22.8■■□□□ 1.24
SSBP4-203ENST00000593641 ZSCAN23Q3MJ62 389 aa22.8■■□□□ 1.24
SSBP4-203ENST00000593641 ACAD10Q6JQN1 1059 aa22.8■■□□□ 1.24
SSBP4-203ENST00000593641 INO80CQ6PI98 192 aaPredicted RBP22.8■■□□□ 1.24
SSBP4-203ENST00000593641 MCOLN2Q8IZK6 566 aa22.8■■□□□ 1.24
SSBP4-203ENST00000593641 FBXO39Q8N4B4 442 aa22.8■■□□□ 1.24
SSBP4-203ENST00000593641 PDXPQ96GD0 296 aa22.8■■□□□ 1.24
SSBP4-203ENST00000593641 CINPQ9BW66 212 aaPredicted RBP22.8■■□□□ 1.24
SSBP4-203ENST00000593641 WDR70Q9NW82 654 aa22.8■■□□□ 1.24
SSBP4-203ENST00000593641 RABGEF1Q9UJ41 708 aa22.8■■□□□ 1.24
SSBP4-203ENST00000593641 SCN8AQ9UQD0 1980 aa22.8■■□□□ 1.24
SSBP4-203ENST00000593641 ASH1LQ9NR48 2969 aaKnown RBP22.79■■□□□ 1.24
SSBP4-203ENST00000593641 EIF3CLB5ME19 914 aaKnown RBP22.79■■□□□ 1.24
SSBP4-203ENST00000593641 CACNB4O00305 520 aaPredicted RBP22.79■■□□□ 1.24
SSBP4-203ENST00000593641 BUB1BO60566 1050 aaPredicted RBP22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms