RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 PRKCGP05129 697 aa16.49■□□□□ 0.23
LIG1-205ENST00000593425 PCCBP05166 539 aa16.49■□□□□ 0.23
LIG1-205ENST00000593425 CALB1P05937 261 aa16.49■□□□□ 0.23
LIG1-205ENST00000593425 ALPIP09923 528 aa16.49■□□□□ 0.23
LIG1-205ENST00000593425 KRT10P13645 584 aa16.49■□□□□ 0.23
LIG1-205ENST00000593425 STAT1P42224 750 aa16.49■□□□□ 0.23
LIG1-205ENST00000593425 MLLT3P42568 568 aaPredicted RBP16.49■□□□□ 0.23
LIG1-205ENST00000593425 SUOXP51687 545 aa16.49■□□□□ 0.23
LIG1-205ENST00000593425 RPL7AP62424 266 aaKnown RBP16.49■□□□□ 0.23
LIG1-205ENST00000593425 CCL7P80098 99 aa16.49■□□□□ 0.23
LIG1-205ENST00000593425 INPP5AQ14642 412 aa16.49■□□□□ 0.23
LIG1-205ENST00000593425 PARP15Q460N3 678 aa16.49■□□□□ 0.23
LIG1-205ENST00000593425 LVRNQ6Q4G3 990 aa16.49■□□□□ 0.23
LIG1-205ENST00000593425 CCDC81Q6ZN84 652 aa16.49■□□□□ 0.23
LIG1-205ENST00000593425 DNAAF5Q86Y56 855 aa16.49■□□□□ 0.23
LIG1-205ENST00000593425 UMODL1-AS1Q8N2C9 162 aa16.49■□□□□ 0.23
LIG1-205ENST00000593425 PDXPQ96GD0 296 aa16.49■□□□□ 0.23
LIG1-205ENST00000593425 MCEEQ96PE7 176 aa16.49■□□□□ 0.23
LIG1-205ENST00000593425 FOXP3Q9BZS1 431 aa16.49■□□□□ 0.23
LIG1-205ENST00000593425 SUV39H2Q9H5I1 410 aa16.49■□□□□ 0.23
LIG1-205ENST00000593425 UBA2Q9UBT2 640 aaPredicted RBP16.49■□□□□ 0.23
LIG1-205ENST00000593425 GPR34Q9UPC5 381 aa16.49■□□□□ 0.23
LIG1-205ENST00000593425 DAAM1Q9Y4D1 1078 aa16.49■□□□□ 0.23
LIG1-205ENST00000593425 TMEM110-MUSTN1A8MSY1 372 aa16.48■□□□□ 0.23
LIG1-205ENST00000593425 PYCARD-AS1I3L0S3 204 aa16.48■□□□□ 0.23
LIG1-205ENST00000593425 J3KR12 359 aa16.48■□□□□ 0.23
LIG1-205ENST00000593425 PLD2O14939 933 aa16.48■□□□□ 0.23
LIG1-205ENST00000593425 BUB1BO60566 1050 aaPredicted RBP16.48■□□□□ 0.23
LIG1-205ENST00000593425 RPLP0P05388 317 aaKnown RBP16.48■□□□□ 0.23
LIG1-205ENST00000593425 HGFP14210 728 aa16.48■□□□□ 0.23
LIG1-205ENST00000593425 HTR1BP28222 390 aa16.48■□□□□ 0.23
LIG1-205ENST00000593425 MMP12P39900 470 aa16.48■□□□□ 0.23
LIG1-205ENST00000593425 RGRP47804 291 aa16.48■□□□□ 0.23
LIG1-205ENST00000593425 LIG3P49916 1009 aa16.48■□□□□ 0.23
LIG1-205ENST00000593425 ZNF143P52747 638 aaPredicted RBP16.48■□□□□ 0.23
LIG1-205ENST00000593425 SRP54P61011 504 aaKnown RBP16.48■□□□□ 0.23
LIG1-205ENST00000593425 AGERQ15109 404 aa16.48■□□□□ 0.23
LIG1-205ENST00000593425 CT47A1Q5JQC4 288 aaPredicted RBP16.48■□□□□ 0.23
LIG1-205ENST00000593425 DNAJC24Q6P3W2 148 aa16.48■□□□□ 0.23
LIG1-205ENST00000593425 GKN2Q86XP6 184 aa16.48■□□□□ 0.23
LIG1-205ENST00000593425 FBXO39Q8N4B4 442 aa16.48■□□□□ 0.23
LIG1-205ENST00000593425 PLA2G15Q8NCC3 412 aa16.48■□□□□ 0.23
LIG1-205ENST00000593425 ENOX1Q8TC92 643 aaKnown RBP16.48■□□□□ 0.23
LIG1-205ENST00000593425 HCAR2Q8TDS4 363 aa16.48■□□□□ 0.23
LIG1-205ENST00000593425 SCG3Q8WXD2 468 aaKnown RBP16.48■□□□□ 0.23
LIG1-205ENST00000593425 WDR92Q96MX6 357 aa16.48■□□□□ 0.23
LIG1-205ENST00000593425 GFM1Q96RP9 751 aaKnown RBP16.48■□□□□ 0.23
LIG1-205ENST00000593425 LRRC19Q9H756 370 aa16.48■□□□□ 0.23
LIG1-205ENST00000593425 CATSPERBQ9H7T0 1116 aa16.48■□□□□ 0.23
LIG1-205ENST00000593425 KLQ9UEF7 1012 aa16.48■□□□□ 0.23
LIG1-205ENST00000593425 ZNF462Q96JM2 2506 aa16.47■□□□□ 0.23
LIG1-205ENST00000593425 B8ZZF3 427 aa16.47■□□□□ 0.23
LIG1-205ENST00000593425 EFSO43281 561 aa16.47■□□□□ 0.23
LIG1-205ENST00000593425 SLC5A2P31639 672 aa16.47■□□□□ 0.23
LIG1-205ENST00000593425 UGT1A5P35504 534 aa16.47■□□□□ 0.23
LIG1-205ENST00000593425 OGDHQ02218 1023 aa16.47■□□□□ 0.23
LIG1-205ENST00000593425 RALGDSQ12967 914 aa16.47■□□□□ 0.23
LIG1-205ENST00000593425 SRSF6Q13247 344 aaKnown RBP16.47■□□□□ 0.23
LIG1-205ENST00000593425 SYCP1Q15431 976 aa16.47■□□□□ 0.23
LIG1-205ENST00000593425 PPP1R15BQ5SWA1 713 aa16.47■□□□□ 0.23
LIG1-205ENST00000593425 FKBP15Q5T1M5 1219 aa16.47■□□□□ 0.23
LIG1-205ENST00000593425 RAB11FIP2Q7L804 512 aa16.47■□□□□ 0.23
LIG1-205ENST00000593425 CAMK1DQ8IU85 385 aa16.47■□□□□ 0.23
LIG1-205ENST00000593425 SFTPA2Q8IWL1 248 aa16.47■□□□□ 0.23
LIG1-205ENST00000593425 GPR156Q8NFN8 814 aa16.47■□□□□ 0.23
LIG1-205ENST00000593425 CELF6Q96J87 481 aaKnown RBP16.47■□□□□ 0.23
LIG1-205ENST00000593425 RBM15Q96T37 977 aaKnown RBP eCLIP16.47■□□□□ 0.23
LIG1-205ENST00000593425 LRRN3Q9H3W5 708 aa16.47■□□□□ 0.23
LIG1-205ENST00000593425 SEPT11Q9NVA2 429 aaKnown RBP16.47■□□□□ 0.23
LIG1-205ENST00000593425 WDR70Q9NW82 654 aa16.47■□□□□ 0.23
LIG1-205ENST00000593425 GPATCH2LQ9NWQ4 482 aa16.47■□□□□ 0.23
LIG1-205ENST00000593425 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.47■□□□□ 0.23
LIG1-205ENST00000593425 ATP8A1Q9Y2Q0 1164 aa16.47■□□□□ 0.23
LIG1-205ENST00000593425 CFAP46Q8IYW2 2715 aa16.47■□□□□ 0.23
LIG1-205ENST00000593425 COL6A6A6NMZ7 2263 aa16.46■□□□□ 0.23
LIG1-205ENST00000593425 FGF10O15520 208 aaPredicted RBP16.46■□□□□ 0.23
LIG1-205ENST00000593425 AIF1P55008 147 aa16.46■□□□□ 0.23
LIG1-205ENST00000593425 INHBCP55103 352 aa16.46■□□□□ 0.23
LIG1-205ENST00000593425 TPI1P60174 286 aa16.46■□□□□ 0.23
LIG1-205ENST00000593425 EIF3IQ13347 325 aaKnown RBP16.46■□□□□ 0.23
LIG1-205ENST00000593425 MTM1Q13496 603 aa16.46■□□□□ 0.23
LIG1-205ENST00000593425 GRM3Q14832 879 aa16.46■□□□□ 0.23
LIG1-205ENST00000593425 TGIF1Q15583 401 aa16.46■□□□□ 0.23
LIG1-205ENST00000593425 ERAP2Q6P179 960 aa16.46■□□□□ 0.23
LIG1-205ENST00000593425 BRAT1Q6PJG6 821 aa16.46■□□□□ 0.23
LIG1-205ENST00000593425 JAMLQ86YT9 394 aa16.46■□□□□ 0.23
LIG1-205ENST00000593425 OR1E3Q8WZA6 343 aa16.46■□□□□ 0.23
LIG1-205ENST00000593425 MED8Q96G25 268 aa16.46■□□□□ 0.23
LIG1-205ENST00000593425 ZNF641Q96N77 438 aaPredicted RBP16.46■□□□□ 0.23
LIG1-205ENST00000593425 CCNL2Q96S94 520 aaPredicted RBP16.46■□□□□ 0.23
LIG1-205ENST00000593425 FGF22Q9HCT0 170 aa16.46■□□□□ 0.23
LIG1-205ENST00000593425 MRPL40Q9NQ50 206 aaKnown RBP16.46■□□□□ 0.23
LIG1-205ENST00000593425 CHMP5Q9NZZ3 219 aa16.46■□□□□ 0.23
LIG1-205ENST00000593425 ATXN7L1Q9ULK2 861 aaPredicted RBP16.46■□□□□ 0.23
LIG1-205ENST00000593425 PCDHGA7Q9Y5G6 932 aa16.46■□□□□ 0.23
LIG1-205ENST00000593425 TMEM202A6NGA9 273 aa16.45■□□□□ 0.22
LIG1-205ENST00000593425 AGRPO00253 132 aa16.45■□□□□ 0.22
LIG1-205ENST00000593425 NOBOXO60393 691 aa16.45■□□□□ 0.22
LIG1-205ENST00000593425 PRAMEF11O60813 436 aa16.45■□□□□ 0.22
LIG1-205ENST00000593425 TNFP01375 233 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms