RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 FSCN3Q9NQT6 498 aa9.73□□□□□ -0.85
DDX39A-220ENST00000593008 RAB6BQ9NRW1 208 aa9.73□□□□□ -0.85
DDX39A-220ENST00000593008 USP36Q9P275 1121 aaKnown RBP9.73□□□□□ -0.85
DDX39A-220ENST00000593008 RNF14Q9UBS8 474 aa9.73□□□□□ -0.85
DDX39A-220ENST00000593008 SUN2Q9UH99 717 aa9.73□□□□□ -0.85
DDX39A-220ENST00000593008 IL36AQ9UHA7 158 aa9.73□□□□□ -0.85
DDX39A-220ENST00000593008 ASIC3Q9UHC3 531 aa9.73□□□□□ -0.85
DDX39A-220ENST00000593008 DMGDHQ9UI17 866 aaKnown RBP9.73□□□□□ -0.85
DDX39A-220ENST00000593008 CHKBQ9Y259 395 aa9.73□□□□□ -0.85
DDX39A-220ENST00000593008 SNX24Q9Y343 169 aa9.73□□□□□ -0.85
DDX39A-220ENST00000593008 RAI2Q9Y5P3 530 aa9.73□□□□□ -0.85
DDX39A-220ENST00000593008 MYLKQ15746 1914 aa9.73□□□□□ -0.85
DDX39A-220ENST00000593008 ANKRD36A6QL64 1941 aa9.72□□□□□ -0.85
DDX39A-220ENST00000593008 GOLGA8CPA6NN73 597 aa9.72□□□□□ -0.85
DDX39A-220ENST00000593008 A8MX80 341 aa9.72□□□□□ -0.85
DDX39A-220ENST00000593008 PRR5-ARHGAP8B1AHC4 643 aa9.72□□□□□ -0.85
DDX39A-220ENST00000593008 GOLGA8MH3BSY2 632 aa9.72□□□□□ -0.85
DDX39A-220ENST00000593008 KPNA3O00505 521 aaPredicted RBP9.72□□□□□ -0.85
DDX39A-220ENST00000593008 TRAFD1O14545 582 aaPredicted RBP9.72□□□□□ -0.85
DDX39A-220ENST00000593008 BANF1O75531 89 aa9.72□□□□□ -0.85
DDX39A-220ENST00000593008 STK10O94804 968 aaKnown RBP9.72□□□□□ -0.85
DDX39A-220ENST00000593008 PRLP01236 227 aa9.72□□□□□ -0.85
DDX39A-220ENST00000593008 IL1BP01584 269 aa9.72□□□□□ -0.85
DDX39A-220ENST00000593008 CFIP05156 583 aa9.72□□□□□ -0.85
DDX39A-220ENST00000593008 ALPIP09923 528 aa9.72□□□□□ -0.85
DDX39A-220ENST00000593008 RHOXF2BP0C7M4 288 aa9.72□□□□□ -0.85
DDX39A-220ENST00000593008 ATXN1LP0C7T5 689 aaKnown RBP9.72□□□□□ -0.85
DDX39A-220ENST00000593008 CTPS1P17812 591 aa9.72□□□□□ -0.85
DDX39A-220ENST00000593008 IVDP26440 423 aa9.72□□□□□ -0.85
DDX39A-220ENST00000593008 NNMTP40261 264 aa9.72□□□□□ -0.85
DDX39A-220ENST00000593008 RPL21P46778 160 aaKnown RBP9.72□□□□□ -0.85
DDX39A-220ENST00000593008 VASPP50552 380 aaPredicted RBP9.72□□□□□ -0.85
DDX39A-220ENST00000593008 WNT3AP56704 352 aa9.72□□□□□ -0.85
DDX39A-220ENST00000593008 GEMIN4P57678 1058 aaKnown RBP9.72□□□□□ -0.85
DDX39A-220ENST00000593008 SNRPD1P62314 119 aaKnown RBP9.72□□□□□ -0.85
DDX39A-220ENST00000593008 BASP1P80723 227 aaKnown RBP9.72□□□□□ -0.85
DDX39A-220ENST00000593008 ARHGAP8P85298 464 aa9.72□□□□□ -0.85
DDX39A-220ENST00000593008 SLC20A2Q08357 652 aa9.72□□□□□ -0.85
DDX39A-220ENST00000593008 ELAVL3Q14576 367 aaKnown RBP9.72□□□□□ -0.85
DDX39A-220ENST00000593008 ZNF776Q68DI1 518 aaPredicted RBP9.72□□□□□ -0.85
DDX39A-220ENST00000593008 C8orf74Q6P047 294 aa9.72□□□□□ -0.85
DDX39A-220ENST00000593008 AGGF1Q8N302 714 aaeCLIP9.72□□□□□ -0.85
DDX39A-220ENST00000593008 MMGT1Q8N4V1 131 aa9.72□□□□□ -0.85
DDX39A-220ENST00000593008 SLC25A41Q8N5S1 370 aa9.72□□□□□ -0.85
DDX39A-220ENST00000593008 PDCD7Q8N8D1 485 aaKnown RBP9.72□□□□□ -0.85
DDX39A-220ENST00000593008 CEP112Q8N8E3 955 aa9.72□□□□□ -0.85
DDX39A-220ENST00000593008 KDM1BQ8NB78 822 aa9.72□□□□□ -0.85
DDX39A-220ENST00000593008 LPCAT1Q8NF37 534 aa9.72□□□□□ -0.85
DDX39A-220ENST00000593008 PIP4K2CQ8TBX8 421 aa9.72□□□□□ -0.85
DDX39A-220ENST00000593008 CASKIN2Q8WXE0 1202 aa9.72□□□□□ -0.85
DDX39A-220ENST00000593008 CPT1BQ92523 772 aa9.72□□□□□ -0.85
DDX39A-220ENST00000593008 SLCO2A1Q92959 643 aa9.72□□□□□ -0.85
DDX39A-220ENST00000593008 ISG20Q96AZ6 181 aaKnown RBP9.72□□□□□ -0.85
DDX39A-220ENST00000593008 FCRL5Q96RD9 977 aa9.72□□□□□ -0.85
DDX39A-220ENST00000593008 TRIB3Q96RU7 358 aa9.72□□□□□ -0.85
DDX39A-220ENST00000593008 HEPHQ9BQS7 1158 aa9.72□□□□□ -0.85
DDX39A-220ENST00000593008 RHOXF2Q9BQY4 288 aa9.72□□□□□ -0.85
DDX39A-220ENST00000593008 TRIM56Q9BRZ2 755 aaKnown RBP9.72□□□□□ -0.85
DDX39A-220ENST00000593008 RSPH9Q9H1X1 276 aaPredicted RBP9.72□□□□□ -0.85
DDX39A-220ENST00000593008 NEUROG2Q9H2A3 272 aa9.72□□□□□ -0.85
DDX39A-220ENST00000593008 WSB2Q9NYS7 404 aaPredicted RBP9.72□□□□□ -0.85
DDX39A-220ENST00000593008 PPM1HQ9ULR3 514 aa9.72□□□□□ -0.85
DDX39A-220ENST00000593008 SPO11Q9Y5K1 396 aa9.72□□□□□ -0.85
DDX39A-220ENST00000593008 SPAG17Q6Q759 2223 aa9.71□□□□□ -0.85
DDX39A-220ENST00000593008 A0A1W2PP55 124 aa9.71□□□□□ -0.86
DDX39A-220ENST00000593008 LNP1A1A4G5 178 aa9.71□□□□□ -0.86
DDX39A-220ENST00000593008 DCDC2BA2VCK2 349 aa9.71□□□□□ -0.86
DDX39A-220ENST00000593008 FAM47DPA6NHR8 397 aa9.71□□□□□ -0.86
DDX39A-220ENST00000593008 MEI4A8MW99 385 aa9.71□□□□□ -0.86
DDX39A-220ENST00000593008 KHNYNO15037 678 aaKnown RBP9.71□□□□□ -0.86
DDX39A-220ENST00000593008 MTSS1O43312 755 aa9.71□□□□□ -0.86
DDX39A-220ENST00000593008 AVILO75366 819 aa9.71□□□□□ -0.86
DDX39A-220ENST00000593008 HEXIM1O94992 359 aaKnown RBP9.71□□□□□ -0.86
DDX39A-220ENST00000593008 SLC4A1P02730 911 aa9.71□□□□□ -0.86
DDX39A-220ENST00000593008 DNTTP04053 509 aa9.71□□□□□ -0.86
DDX39A-220ENST00000593008 KCNA4P22459 653 aa9.71□□□□□ -0.86
DDX39A-220ENST00000593008 SLC8A1P32418 973 aa9.71□□□□□ -0.86
DDX39A-220ENST00000593008 ACSL1P33121 698 aa9.71□□□□□ -0.86
DDX39A-220ENST00000593008 ADRA1AP35348 466 aa9.71□□□□□ -0.86
DDX39A-220ENST00000593008 DRD3P35462 400 aa9.71□□□□□ -0.86
DDX39A-220ENST00000593008 HSPA9P38646 679 aaKnown RBP9.71□□□□□ -0.86
DDX39A-220ENST00000593008 RECQLP46063 649 aaPredicted RBP9.71□□□□□ -0.86
DDX39A-220ENST00000593008 AP1S1P61966 158 aa9.71□□□□□ -0.86
DDX39A-220ENST00000593008 IRX4P78413 519 aa9.71□□□□□ -0.86
DDX39A-220ENST00000593008 CNTN1Q12860 1018 aa9.71□□□□□ -0.86
DDX39A-220ENST00000593008 SEMA5AQ13591 1074 aa9.71□□□□□ -0.86
DDX39A-220ENST00000593008 KCNJ11Q14654 390 aa9.71□□□□□ -0.86
DDX39A-220ENST00000593008 SMAD1Q15797 465 aaKnown RBP9.71□□□□□ -0.86
DDX39A-220ENST00000593008 CST6Q15828 149 aa9.71□□□□□ -0.86
DDX39A-220ENST00000593008 TRIM61Q5EBN2 209 aa9.71□□□□□ -0.86
DDX39A-220ENST00000593008 UBAP2Q5T6F2 1119 aaKnown RBP9.71□□□□□ -0.86
DDX39A-220ENST00000593008 RNASEH2BQ5TBB1 312 aaKnown RBP9.71□□□□□ -0.86
DDX39A-220ENST00000593008 IZUMO3Q5VZ72 239 aa9.71□□□□□ -0.86
DDX39A-220ENST00000593008 KCTD11Q693B1 232 aa9.71□□□□□ -0.86
DDX39A-220ENST00000593008 ITPRIPL1Q6GPH6 555 aa9.71□□□□□ -0.86
DDX39A-220ENST00000593008 ZDHHC24Q6UX98 284 aa9.71□□□□□ -0.86
DDX39A-220ENST00000593008 GDPD4Q6W3E5 623 aa9.71□□□□□ -0.86
DDX39A-220ENST00000593008 KDM7AQ6ZMT4 941 aa9.71□□□□□ -0.86
DDX39A-220ENST00000593008 METTL3Q86U44 580 aaKnown RBP9.71□□□□□ -0.86
DDX39A-220ENST00000593008 TSPAN33Q86UF1 283 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms