RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 ATP8A1Q9Y2Q0 1164 aa19.02■□□□□ 0.64
CCDC43-205ENST00000592333 A0A1W2PQ67 120 aa19.01■□□□□ 0.63
CCDC43-205ENST00000592333 A0A1W2PQC6 194 aa19.01■□□□□ 0.63
CCDC43-205ENST00000592333 CAPN8A6NHC0 703 aa19.01■□□□□ 0.63
CCDC43-205ENST00000592333 SMTNL1A8MU46 457 aa19.01■□□□□ 0.63
CCDC43-205ENST00000592333 TMX2-CTNND1H3BSU7 103 aa19.01■□□□□ 0.63
CCDC43-205ENST00000592333 INSIG1O15503 277 aa19.01■□□□□ 0.63
CCDC43-205ENST00000592333 PALMO75781 387 aa19.01■□□□□ 0.63
CCDC43-205ENST00000592333 HOXC4P09017 264 aaPredicted RBP19.01■□□□□ 0.63
CCDC43-205ENST00000592333 MYF5P13349 255 aa19.01■□□□□ 0.63
CCDC43-205ENST00000592333 C6P13671 934 aa19.01■□□□□ 0.63
CCDC43-205ENST00000592333 TSHRP16473 764 aa19.01■□□□□ 0.63
CCDC43-205ENST00000592333 MMP12P39900 470 aa19.01■□□□□ 0.63
CCDC43-205ENST00000592333 PRKCIP41743 596 aa19.01■□□□□ 0.63
CCDC43-205ENST00000592333 RENBPP51606 427 aa19.01■□□□□ 0.63
CCDC43-205ENST00000592333 IL10RBQ08334 325 aa19.01■□□□□ 0.63
CCDC43-205ENST00000592333 NFATC4Q14934 902 aa19.01■□□□□ 0.63
CCDC43-205ENST00000592333 WSCD2Q2TBF2 565 aa19.01■□□□□ 0.63
CCDC43-205ENST00000592333 FILIP1LQ4L180 1135 aa19.01■□□□□ 0.63
CCDC43-205ENST00000592333 RFX8Q6ZV50 586 aa19.01■□□□□ 0.63
CCDC43-205ENST00000592333 SRLQ86TD4 932 aa19.01■□□□□ 0.63
CCDC43-205ENST00000592333 SLC35F3Q8IY50 421 aa19.01■□□□□ 0.63
CCDC43-205ENST00000592333 ARL10Q8N8L6 244 aa19.01■□□□□ 0.63
CCDC43-205ENST00000592333 ECHDC3Q96DC8 303 aa19.01■□□□□ 0.63
CCDC43-205ENST00000592333 TRIM11Q96F44 468 aa19.01■□□□□ 0.63
CCDC43-205ENST00000592333 SLC46A1Q96NT5 459 aa19.01■□□□□ 0.63
CCDC43-205ENST00000592333 SLC39A8Q9C0K1 460 aa19.01■□□□□ 0.63
CCDC43-205ENST00000592333 CLPBQ9H078 707 aa19.01■□□□□ 0.63
CCDC43-205ENST00000592333 DHX35Q9H5Z1 703 aaKnown RBP19.01■□□□□ 0.63
CCDC43-205ENST00000592333 ASCL3Q9NQ33 180 aa19.01■□□□□ 0.63
CCDC43-205ENST00000592333 KCTD5Q9NXV2 234 aa19.01■□□□□ 0.63
CCDC43-205ENST00000592333 PNMA8BQ9ULN7 279 aaPredicted RBP19.01■□□□□ 0.63
CCDC43-205ENST00000592333 PADI4Q9UM07 663 aa19.01■□□□□ 0.63
CCDC43-205ENST00000592333 RAI2Q9Y5P3 530 aa19.01■□□□□ 0.63
CCDC43-205ENST00000592333 DGKBQ9Y6T7 804 aa19.01■□□□□ 0.63
CCDC43-205ENST00000592333 SCINQ9Y6U3 715 aa19.01■□□□□ 0.63
CCDC43-205ENST00000592333 J3KR12 359 aa19■□□□□ 0.63
CCDC43-205ENST00000592333 DAPK3O43293 454 aa19■□□□□ 0.63
CCDC43-205ENST00000592333 PRPSAP2O60256 369 aa19■□□□□ 0.63
CCDC43-205ENST00000592333 BUB1BO60566 1050 aaPredicted RBP19■□□□□ 0.63
CCDC43-205ENST00000592333 PIGNO95427 931 aa19■□□□□ 0.63
CCDC43-205ENST00000592333 MYBL1P10243 752 aa19■□□□□ 0.63
CCDC43-205ENST00000592333 CTSEP14091 401 aa19■□□□□ 0.63
CCDC43-205ENST00000592333 RBMS1P29558 406 aaKnown RBP19■□□□□ 0.63
CCDC43-205ENST00000592333 PAPOLAP51003 745 aaKnown RBP19■□□□□ 0.63
CCDC43-205ENST00000592333 LRRC73Q5JTD7 316 aa19■□□□□ 0.63
CCDC43-205ENST00000592333 GKN2Q86XP6 184 aa19■□□□□ 0.63
CCDC43-205ENST00000592333 SNRNP27Q8WVK2 155 aaKnown RBP19■□□□□ 0.63
CCDC43-205ENST00000592333 WBP1Q96G27 269 aa19■□□□□ 0.63
CCDC43-205ENST00000592333 EXOC2Q96KP1 924 aa19■□□□□ 0.63
CCDC43-205ENST00000592333 ZNF599Q96NL3 588 aa19■□□□□ 0.63
CCDC43-205ENST00000592333 APOOQ9BUR5 198 aa19■□□□□ 0.63
CCDC43-205ENST00000592333 TCEAL2Q9H3H9 227 aaPredicted RBP19■□□□□ 0.63
CCDC43-205ENST00000592333 CAAP1Q9H8G2 361 aa19■□□□□ 0.63
CCDC43-205ENST00000592333 MRPL47Q9HD33 250 aaKnown RBP19■□□□□ 0.63
CCDC43-205ENST00000592333 TAS2R14Q9NYV8 317 aa19■□□□□ 0.63
CCDC43-205ENST00000592333 DOLKQ9UPQ8 538 aa19■□□□□ 0.63
CCDC43-205ENST00000592333 SSUH2Q9Y2M2 353 aa19■□□□□ 0.63
CCDC43-205ENST00000592333 ENTPD2Q9Y5L3 495 aa19■□□□□ 0.63
CCDC43-205ENST00000592333 TNFRSF10CO14798 259 aa18.99■□□□□ 0.63
CCDC43-205ENST00000592333 ERCC2P18074 760 aa18.99■□□□□ 0.63
CCDC43-205ENST00000592333 ITIH2P19823 946 aa18.99■□□□□ 0.63
CCDC43-205ENST00000592333 KELP23276 732 aa18.99■□□□□ 0.63
CCDC43-205ENST00000592333 PCK1P35558 622 aa18.99■□□□□ 0.63
CCDC43-205ENST00000592333 LIG3P49916 1009 aa18.99■□□□□ 0.63
CCDC43-205ENST00000592333 TMPRSS3P57727 454 aa18.99■□□□□ 0.63
CCDC43-205ENST00000592333 AP1S1P61966 158 aa18.99■□□□□ 0.63
CCDC43-205ENST00000592333 SKOR1P84550 965 aa18.99■□□□□ 0.63
CCDC43-205ENST00000592333 TYRO3Q06418 890 aa18.99■□□□□ 0.63
CCDC43-205ENST00000592333 BCL2L1Q07817 233 aa18.99■□□□□ 0.63
CCDC43-205ENST00000592333 CCDC173Q0VFZ6 552 aa18.99■□□□□ 0.63
CCDC43-205ENST00000592333 EIF3IQ13347 325 aaKnown RBP18.99■□□□□ 0.63
CCDC43-205ENST00000592333 C1orf61Q13536 156 aa18.99■□□□□ 0.63
CCDC43-205ENST00000592333 INPP5AQ14642 412 aa18.99■□□□□ 0.63
CCDC43-205ENST00000592333 CAMK1DQ8IU85 385 aa18.99■□□□□ 0.63
CCDC43-205ENST00000592333 AOPEPQ8N6M6 819 aa18.99■□□□□ 0.63
CCDC43-205ENST00000592333 ARFGAP1Q8N6T3 406 aa18.99■□□□□ 0.63
CCDC43-205ENST00000592333 WDR36Q8NI36 951 aaKnown RBP18.99■□□□□ 0.63
CCDC43-205ENST00000592333 SLC39A7Q92504 469 aa18.99■□□□□ 0.63
CCDC43-205ENST00000592333 WDR92Q96MX6 357 aa18.99■□□□□ 0.63
CCDC43-205ENST00000592333 PSKH2Q96QS6 385 aa18.99■□□□□ 0.63
CCDC43-205ENST00000592333 SNRNP25Q9BV90 132 aaKnown RBP18.99■□□□□ 0.63
CCDC43-205ENST00000592333 CINPQ9BW66 212 aaPredicted RBP18.99■□□□□ 0.63
CCDC43-205ENST00000592333 ZWILCHQ9H900 591 aa18.99■□□□□ 0.63
CCDC43-205ENST00000592333 LRRC53A6NM62 1247 aa18.98■□□□□ 0.63
CCDC43-205ENST00000592333 NTN3O00634 580 aaPredicted RBP18.98■□□□□ 0.63
CCDC43-205ENST00000592333 MUSKO15146 869 aa18.98■□□□□ 0.63
CCDC43-205ENST00000592333 TEX33O43247 280 aa18.98■□□□□ 0.63
CCDC43-205ENST00000592333 FTLP02792 175 aaPredicted RBP18.98■□□□□ 0.63
CCDC43-205ENST00000592333 NFKBIAP25963 317 aa18.98■□□□□ 0.63
CCDC43-205ENST00000592333 MIPP30301 263 aa18.98■□□□□ 0.63
CCDC43-205ENST00000592333 HSPA9P38646 679 aaKnown RBP18.98■□□□□ 0.63
CCDC43-205ENST00000592333 KIAA1024LP59773 190 aa18.98■□□□□ 0.63
CCDC43-205ENST00000592333 SRP54P61011 504 aaKnown RBP18.98■□□□□ 0.63
CCDC43-205ENST00000592333 C19orf57Q0VDD7 668 aa18.98■□□□□ 0.63
CCDC43-205ENST00000592333 SPIDRQ14159 915 aa18.98■□□□□ 0.63
CCDC43-205ENST00000592333 ASIC2Q16515 512 aa18.98■□□□□ 0.63
CCDC43-205ENST00000592333 ALG11Q2TAA5 492 aa18.98■□□□□ 0.63
CCDC43-205ENST00000592333 ENPP7Q6UWV6 458 aa18.98■□□□□ 0.63
CCDC43-205ENST00000592333 ARHGAP12Q8IWW6 846 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms