RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 SCUBE2Q9NQ36 999 aa27.42■■□□□ 1.98
SMAD4-213ENST00000591914 NEUROG3Q9Y4Z2 214 aa27.42■■□□□ 1.98
SMAD4-213ENST00000591914 CFAP69A5D8W1 941 aa27.41■■□□□ 1.98
SMAD4-213ENST00000591914 MATN3O15232 486 aa27.41■■□□□ 1.98
SMAD4-213ENST00000591914 MAP3K6O95382 1288 aa27.41■■□□□ 1.98
SMAD4-213ENST00000591914 CCNCP24863 283 aa27.41■■□□□ 1.98
SMAD4-213ENST00000591914 CYLC1P35663 651 aaPredicted RBP27.41■■□□□ 1.98
SMAD4-213ENST00000591914 LIG3P49916 1009 aa27.41■■□□□ 1.98
SMAD4-213ENST00000591914 MAXP61244 160 aa27.41■■□□□ 1.98
SMAD4-213ENST00000591914 SLC10A2Q12908 348 aaPredicted RBP27.41■■□□□ 1.98
SMAD4-213ENST00000591914 AGERQ15109 404 aa27.41■■□□□ 1.98
SMAD4-213ENST00000591914 TIGD7Q6NT04 549 aaPredicted RBP27.41■■□□□ 1.98
SMAD4-213ENST00000591914 SLC25A45Q8N413 288 aa27.41■■□□□ 1.98
SMAD4-213ENST00000591914 MBNL1Q9NR56 388 aaKnown RBP27.41■■□□□ 1.98
SMAD4-213ENST00000591914 DTLQ9NZJ0 730 aa27.41■■□□□ 1.98
SMAD4-213ENST00000591914 COQ6Q9Y2Z9 468 aa27.41■■□□□ 1.98
SMAD4-213ENST00000591914 PCDHGC4Q9Y5F7 938 aa27.41■■□□□ 1.98
SMAD4-213ENST00000591914 PCDHA13Q9Y5I0 950 aa27.41■■□□□ 1.98
SMAD4-213ENST00000591914 ARID1BQ8NFD5 2236 aaPredicted RBP27.4■■□□□ 1.98
SMAD4-213ENST00000591914 FRYQ5TBA9 3013 aa27.4■■□□□ 1.98
SMAD4-213ENST00000591914 A0A1W2PQ67 120 aa27.4■■□□□ 1.98
SMAD4-213ENST00000591914 FAM221BA6H8Z2 402 aa27.4■■□□□ 1.98
SMAD4-213ENST00000591914 MX2P20592 715 aa27.4■■□□□ 1.98
SMAD4-213ENST00000591914 COMTP21964 271 aa27.4■■□□□ 1.98
SMAD4-213ENST00000591914 DGKAP23743 735 aa27.4■■□□□ 1.98
SMAD4-213ENST00000591914 SEMG2Q02383 582 aa27.4■■□□□ 1.98
SMAD4-213ENST00000591914 RALGDSQ12967 914 aa27.4■■□□□ 1.98
SMAD4-213ENST00000591914 PDE1CQ14123 709 aaPredicted RBP27.4■■□□□ 1.98
SMAD4-213ENST00000591914 SPA17Q15506 151 aa27.4■■□□□ 1.98
SMAD4-213ENST00000591914 TPRG1LQ5T0D9 272 aa27.4■■□□□ 1.98
SMAD4-213ENST00000591914 PARGQ86W56 976 aa27.4■■□□□ 1.98
SMAD4-213ENST00000591914 RHOT1Q8IXI2 618 aa27.4■■□□□ 1.98
SMAD4-213ENST00000591914 PLD5Q8N7P1 536 aa27.4■■□□□ 1.98
SMAD4-213ENST00000591914 ANP32EQ9BTT0 268 aa27.4■■□□□ 1.98
SMAD4-213ENST00000591914 NT5MQ9NPB1 228 aa27.4■■□□□ 1.98
SMAD4-213ENST00000591914 KLK13Q9UKR3 277 aa27.4■■□□□ 1.98
SMAD4-213ENST00000591914 HYOU1Q9Y4L1 999 aa27.4■■□□□ 1.98
SMAD4-213ENST00000591914 TOR1BO14657 336 aa27.39■■□□□ 1.98
SMAD4-213ENST00000591914 PIAS2O75928 621 aa27.39■■□□□ 1.98
SMAD4-213ENST00000591914 LDOC1O95751 146 aaPredicted RBP27.39■■□□□ 1.98
SMAD4-213ENST00000591914 YPEL5P62699 121 aa27.39■■□□□ 1.98
SMAD4-213ENST00000591914 LRRC14Q15048 493 aa27.39■■□□□ 1.98
SMAD4-213ENST00000591914 IRF4Q15306 451 aa27.39■■□□□ 1.98
SMAD4-213ENST00000591914 WSCD2Q2TBF2 565 aa27.39■■□□□ 1.98
SMAD4-213ENST00000591914 SLC9A4Q6AI14 798 aa27.39■■□□□ 1.98
SMAD4-213ENST00000591914 ALG1LQ6GMV1 187 aa27.39■■□□□ 1.98
SMAD4-213ENST00000591914 DPPA4Q7L190 304 aa27.39■■□□□ 1.98
SMAD4-213ENST00000591914 PAF1Q8N7H5 531 aa27.39■■□□□ 1.98
SMAD4-213ENST00000591914 HDAC11Q96DB2 347 aa27.39■■□□□ 1.98
SMAD4-213ENST00000591914 CNDP2Q96KP4 475 aaKnown RBP27.39■■□□□ 1.98
SMAD4-213ENST00000591914 CAAP1Q9H8G2 361 aa27.39■■□□□ 1.98
SMAD4-213ENST00000591914 LUC7LQ9NQ29 371 aaKnown RBP27.39■■□□□ 1.98
SMAD4-213ENST00000591914 UCKL1Q9NWZ5 548 aa27.39■■□□□ 1.98
SMAD4-213ENST00000591914 DNAJC28Q9NX36 388 aa27.39■■□□□ 1.98
SMAD4-213ENST00000591914 DDX56Q9NY93 547 aaKnown RBP27.39■■□□□ 1.98
SMAD4-213ENST00000591914 AMACRQ9UHK6 382 aa27.39■■□□□ 1.98
SMAD4-213ENST00000591914 A0A0A6YYK5 440 aaPredicted RBP27.38■■□□□ 1.97
SMAD4-213ENST00000591914 SOWAHDA6NJG2 315 aa27.38■■□□□ 1.97
SMAD4-213ENST00000591914 ENC1O14682 589 aa27.38■■□□□ 1.97
SMAD4-213ENST00000591914 SPOPO43791 374 aa27.38■■□□□ 1.97
SMAD4-213ENST00000591914 CSF2P04141 144 aa27.38■■□□□ 1.97
SMAD4-213ENST00000591914 KRT1P04264 644 aa27.38■■□□□ 1.97
SMAD4-213ENST00000591914 NME1P15531 152 aaKnown RBP27.38■■□□□ 1.97
SMAD4-213ENST00000591914 NOP2P46087 812 aaKnown RBP27.38■■□□□ 1.97
SMAD4-213ENST00000591914 TRAF2Q12933 501 aa27.38■■□□□ 1.97
SMAD4-213ENST00000591914 ZNF542PQ5EBM4 170 aa27.38■■□□□ 1.97
SMAD4-213ENST00000591914 TMTC1Q8IUR5 882 aa27.38■■□□□ 1.97
SMAD4-213ENST00000591914 POLR1EQ9GZS1 481 aaKnown RBP27.38■■□□□ 1.97
SMAD4-213ENST00000591914 TFR2Q9UP52 801 aa27.38■■□□□ 1.97
SMAD4-213ENST00000591914 MSRB2Q9Y3D2 182 aa27.38■■□□□ 1.97
SMAD4-213ENST00000591914 EPN1Q9Y6I3 576 aaPredicted RBP27.38■■□□□ 1.97
SMAD4-213ENST00000591914 ASPMQ8IZT6 3477 aa27.37■■□□□ 1.97
SMAD4-213ENST00000591914 AKAP13Q12802 2813 aa27.37■■□□□ 1.97
SMAD4-213ENST00000591914 GOLGA8CPA6NN73 597 aa27.37■■□□□ 1.97
SMAD4-213ENST00000591914 NDUFA10O95299 355 aa27.37■■□□□ 1.97
SMAD4-213ENST00000591914 HNRNPKP61978 463 aaKnown RBP eCLIP27.37■■□□□ 1.974e-8■■■■■ 26.9
SMAD4-213ENST00000591914 LIPIQ6XZB0 460 aa27.37■■□□□ 1.97
SMAD4-213ENST00000591914 SEMA3CQ99985 751 aa27.37■■□□□ 1.97
SMAD4-213ENST00000591914 TMEM121BQ9BXQ6 578 aaPredicted RBP27.37■■□□□ 1.97
SMAD4-213ENST00000591914 ALG6Q9Y672 507 aa27.37■■□□□ 1.97
SMAD4-213ENST00000591914 TRIM38O00635 465 aa27.36■■□□□ 1.97
SMAD4-213ENST00000591914 LZTS3O60299 673 aaPredicted RBP27.36■■□□□ 1.97
SMAD4-213ENST00000591914 CPP00450 1065 aa27.36■■□□□ 1.97
SMAD4-213ENST00000591914 ELFN1P0C7U0 828 aa27.36■■□□□ 1.97
SMAD4-213ENST00000591914 CCNB1P14635 433 aa27.36■■□□□ 1.97
SMAD4-213ENST00000591914 THOP1P52888 689 aa27.36■■□□□ 1.97
SMAD4-213ENST00000591914 PTK2BQ14289 1009 aa27.36■■□□□ 1.97
SMAD4-213ENST00000591914 OR4C6Q8NH72 309 aa27.36■■□□□ 1.97
SMAD4-213ENST00000591914 TRAF3IP1Q8TDR0 691 aaPredicted RBP27.36■■□□□ 1.97
SMAD4-213ENST00000591914 PDCD6IPQ8WUM4 868 aaKnown RBP27.36■■□□□ 1.97
SMAD4-213ENST00000591914 LRRN4Q8WUT4 740 aa27.36■■□□□ 1.97
SMAD4-213ENST00000591914 RNF25Q96BH1 459 aaPredicted RBP27.36■■□□□ 1.97
SMAD4-213ENST00000591914 ZNF830Q96NB3 372 aaPredicted RBP27.36■■□□□ 1.97
SMAD4-213ENST00000591914 RBM22Q9NW64 420 aaKnown RBP eCLIP27.36■■□□□ 1.972e-11■□□□□ 8.7
SMAD4-213ENST00000591914 B4GALT6Q9UBX8 382 aa27.36■■□□□ 1.97
SMAD4-213ENST00000591914 KLF15Q9UIH9 416 aa27.36■■□□□ 1.97
SMAD4-213ENST00000591914 TDRD6O60522 2096 aaKnown RBP27.36■■□□□ 1.97
SMAD4-213ENST00000591914 APOL1O14791 398 aa27.35■■□□□ 1.97
SMAD4-213ENST00000591914 PSTPIP1O43586 416 aa27.35■■□□□ 1.97
SMAD4-213ENST00000591914 PGLSO95336 258 aa27.35■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms