RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 RINLQ6ZS11 566 aa13.39□□□□□ -0.27
SMARCA4-216ENST00000591545 PHF13Q86YI8 300 aaPredicted RBP13.39□□□□□ -0.27
SMARCA4-216ENST00000591545 BHLHE22Q8NFJ8 381 aaPredicted RBP13.39□□□□□ -0.27
SMARCA4-216ENST00000591545 MCRS1Q96EZ8 462 aa13.39□□□□□ -0.27
SMARCA4-216ENST00000591545 FAM210AQ96ND0 272 aa13.39□□□□□ -0.27
SMARCA4-216ENST00000591545 REXO4Q9GZR2 422 aaKnown RBP13.39□□□□□ -0.27
SMARCA4-216ENST00000591545 DDX18Q9NVP1 670 aaKnown RBP13.39□□□□□ -0.27
SMARCA4-216ENST00000591545 GNPTGQ9UJJ9 305 aa13.39□□□□□ -0.27
SMARCA4-216ENST00000591545 LIASO43766 372 aa13.39□□□□□ -0.27
SMARCA4-216ENST00000591545 SNAP91O60641 907 aa13.39□□□□□ -0.27
SMARCA4-216ENST00000591545 EPN2O95208 641 aa13.39□□□□□ -0.27
SMARCA4-216ENST00000591545 ATP5F1P24539 256 aaPredicted RBP13.39□□□□□ -0.27
SMARCA4-216ENST00000591545 GTF2E2P29084 291 aaKnown RBP13.39□□□□□ -0.27
SMARCA4-216ENST00000591545 NEPROQ6NW34 567 aa13.39□□□□□ -0.27
SMARCA4-216ENST00000591545 FAM124AQ86V42 546 aa13.39□□□□□ -0.27
SMARCA4-216ENST00000591545 DNAAF5Q86Y56 855 aa13.39□□□□□ -0.27
SMARCA4-216ENST00000591545 CAMKK1Q8N5S9 505 aa13.39□□□□□ -0.27
SMARCA4-216ENST00000591545 KREMEN2Q8NCW0 462 aa13.39□□□□□ -0.27
SMARCA4-216ENST00000591545 ARL15Q9NXU5 204 aa13.39□□□□□ -0.27
SMARCA4-216ENST00000591545 OPTCQ9UBM4 332 aa13.39□□□□□ -0.27
SMARCA4-216ENST00000591545 TRIM38O00635 465 aa13.39□□□□□ -0.27
SMARCA4-216ENST00000591545 MT-CO1P00395 513 aa13.39□□□□□ -0.27
SMARCA4-216ENST00000591545 FTH1P02794 183 aa13.39□□□□□ -0.27
SMARCA4-216ENST00000591545 RPL5P46777 297 aaKnown RBP13.39□□□□□ -0.27
SMARCA4-216ENST00000591545 IL2P60568 153 aa13.39□□□□□ -0.27
SMARCA4-216ENST00000591545 SPIRE1Q08AE8 756 aa13.39□□□□□ -0.27
SMARCA4-216ENST00000591545 BROXQ5VW32 411 aa13.39□□□□□ -0.27
SMARCA4-216ENST00000591545 CNKSR3Q6P9H4 555 aa13.39□□□□□ -0.27
SMARCA4-216ENST00000591545 KLHL35Q6PF15 583 aa13.39□□□□□ -0.27
SMARCA4-216ENST00000591545 C11orf88Q6PI97 169 aa13.39□□□□□ -0.27
SMARCA4-216ENST00000591545 DHDDSQ86SQ9 333 aa13.39□□□□□ -0.27
SMARCA4-216ENST00000591545 RASAL3Q86YV0 1011 aa13.39□□□□□ -0.27
SMARCA4-216ENST00000591545 FBXW8Q8N3Y1 598 aa13.39□□□□□ -0.27
SMARCA4-216ENST00000591545 GLIS3Q8NEA6 775 aa13.39□□□□□ -0.27
SMARCA4-216ENST00000591545 STAG3L4Q8TBR4 150 aa13.39□□□□□ -0.27
SMARCA4-216ENST00000591545 C2orf15Q8WU43 125 aaKnown RBP13.39□□□□□ -0.27
SMARCA4-216ENST00000591545 WDR60Q8WVS4 1066 aa13.39□□□□□ -0.27
SMARCA4-216ENST00000591545 CYLDQ9NQC7 956 aa13.39□□□□□ -0.27
SMARCA4-216ENST00000591545 GSTK1Q9Y2Q3 226 aa13.39□□□□□ -0.27
SMARCA4-216ENST00000591545 MTF2Q9Y483 593 aaPredicted RBP13.39□□□□□ -0.27
SMARCA4-216ENST00000591545 PCDHB9Q9Y5E1 797 aa13.39□□□□□ -0.27
SMARCA4-216ENST00000591545 ROBO1Q9Y6N7 1651 aa13.38□□□□□ -0.27
SMARCA4-216ENST00000591545 PARP4Q9UKK3 1724 aaKnown RBP13.38□□□□□ -0.27
SMARCA4-216ENST00000591545 ABLIM1O14639 778 aa13.38□□□□□ -0.27
SMARCA4-216ENST00000591545 TPP1O14773 563 aa13.38□□□□□ -0.27
SMARCA4-216ENST00000591545 SNPHO15079 494 aa13.38□□□□□ -0.27
SMARCA4-216ENST00000591545 HNRNPH3P31942 346 aaKnown RBP13.38□□□□□ -0.27
SMARCA4-216ENST00000591545 MRPS22P82650 360 aaKnown RBP13.38□□□□□ -0.27
SMARCA4-216ENST00000591545 GNA13Q14344 377 aa13.38□□□□□ -0.27
SMARCA4-216ENST00000591545 CYP2R1Q6VVX0 501 aa13.38□□□□□ -0.27
SMARCA4-216ENST00000591545 POLNQ7Z5Q5 900 aa13.38□□□□□ -0.27
SMARCA4-216ENST00000591545 C12orf29Q8N999 325 aa13.38□□□□□ -0.27
SMARCA4-216ENST00000591545 RP9Q8TA86 221 aaKnown RBP13.38□□□□□ -0.27
SMARCA4-216ENST00000591545 AGAP11Q8TF27 550 aa13.38□□□□□ -0.27
SMARCA4-216ENST00000591545 PROX1Q92786 737 aa13.38□□□□□ -0.27
SMARCA4-216ENST00000591545 FCRL2Q96LA5 508 aaPredicted RBP13.38□□□□□ -0.27
SMARCA4-216ENST00000591545 HGH1Q9BTY7 390 aa13.38□□□□□ -0.27
SMARCA4-216ENST00000591545 GPR88Q9GZN0 384 aa13.38□□□□□ -0.27
SMARCA4-216ENST00000591545 INVSQ9Y283 1065 aa13.38□□□□□ -0.27
SMARCA4-216ENST00000591545 ANKDD1BA6NHY2 528 aa13.38□□□□□ -0.27
SMARCA4-216ENST00000591545 BTN3A1O00481 513 aa13.38□□□□□ -0.27
SMARCA4-216ENST00000591545 ABCB1P08183 1280 aaPredicted RBP13.38□□□□□ -0.27
SMARCA4-216ENST00000591545 OR4Q2P0C623 313 aa13.38□□□□□ -0.27
SMARCA4-216ENST00000591545 TSPAN19P0C672 248 aa13.38□□□□□ -0.27
SMARCA4-216ENST00000591545 ALOX12P18054 663 aa13.38□□□□□ -0.27
SMARCA4-216ENST00000591545 STAT5AP42229 794 aa13.38□□□□□ -0.27
SMARCA4-216ENST00000591545 GPSM1Q86YR5 675 aa13.38□□□□□ -0.27
SMARCA4-216ENST00000591545 ACBD6Q9BR61 282 aa13.38□□□□□ -0.27
SMARCA4-216ENST00000591545 ZNF670Q9BS34 389 aa13.38□□□□□ -0.27
SMARCA4-216ENST00000591545 RERGLQ9H628 205 aa13.38□□□□□ -0.27
SMARCA4-216ENST00000591545 ZFP14Q9HCL3 533 aa13.38□□□□□ -0.27
SMARCA4-216ENST00000591545 LEF1Q9UJU2 399 aaPredicted RBP13.38□□□□□ -0.27
SMARCA4-216ENST00000591545 RPS6KA6Q9UK32 745 aa13.38□□□□□ -0.27
SMARCA4-216ENST00000591545 SLC27A6Q9Y2P4 619 aa13.38□□□□□ -0.27
SMARCA4-216ENST00000591545 RGPD2P0DJD1 1756 aa13.38□□□□□ -0.27
SMARCA4-216ENST00000591545 A0A1W2PQH9 124 aa13.38□□□□□ -0.27
SMARCA4-216ENST00000591545 BCLAF3A2AJT9 711 aaKnown RBP13.38□□□□□ -0.27
SMARCA4-216ENST00000591545 ARL5CA6NH57 179 aa13.38□□□□□ -0.27
SMARCA4-216ENST00000591545 DRD4P21917 467 aa13.38□□□□□ -0.27
SMARCA4-216ENST00000591545 ADSSP30520 456 aa13.38□□□□□ -0.27
SMARCA4-216ENST00000591545 FEN1P39748 380 aaKnown RBP13.38□□□□□ -0.27
SMARCA4-216ENST00000591545 ERVK-21P61565 698 aa13.38□□□□□ -0.27
SMARCA4-216ENST00000591545 ZNF57Q68EA5 555 aaPredicted RBP13.38□□□□□ -0.27
SMARCA4-216ENST00000591545 MZT2BQ6NZ67 158 aa13.38□□□□□ -0.27
SMARCA4-216ENST00000591545 MZT2AQ6P582 158 aa13.38□□□□□ -0.27
SMARCA4-216ENST00000591545 KRT74Q7RTS7 529 aa13.38□□□□□ -0.27
SMARCA4-216ENST00000591545 TEKT5Q96M29 485 aa13.38□□□□□ -0.27
SMARCA4-216ENST00000591545 BBS4Q96RK4 519 aa13.38□□□□□ -0.27
SMARCA4-216ENST00000591545 ETAA1Q9NY74 926 aa13.38□□□□□ -0.27
SMARCA4-216ENST00000591545 COL20A1Q9P218 1284 aa13.38□□□□□ -0.27
SMARCA4-216ENST00000591545 RSL24D1Q9UHA3 163 aaKnown RBP13.38□□□□□ -0.27
SMARCA4-216ENST00000591545 ZMYM5Q9UJ78 669 aa13.38□□□□□ -0.27
SMARCA4-216ENST00000591545 PRPF19Q9UMS4 504 aaKnown RBP13.38□□□□□ -0.27
SMARCA4-216ENST00000591545 C8AP07357 584 aa13.38□□□□□ -0.27
SMARCA4-216ENST00000591545 SNRPB2P08579 225 aaKnown RBP13.38□□□□□ -0.27
SMARCA4-216ENST00000591545 ELFN1P0C7U0 828 aa13.38□□□□□ -0.27
SMARCA4-216ENST00000591545 COX4I1P13073 169 aa13.38□□□□□ -0.27
SMARCA4-216ENST00000591545 STX4Q12846 297 aa13.38□□□□□ -0.27
SMARCA4-216ENST00000591545 DUPD1Q68J44 220 aa13.38□□□□□ -0.27
SMARCA4-216ENST00000591545 LRRC55Q6ZSA7 311 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms