RNA–Protein interactions for RNA: ENST00000590887.5

PTBP1-216, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 642 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-216ENST00000590887 FAM182AQ5T1J6 154 aa13.07□□□□□ -0.32
PTBP1-216ENST00000590887 TRIM68Q6AZZ1 485 aa13.07□□□□□ -0.32
PTBP1-216ENST00000590887 MRNIPQ6NTE8 343 aa13.07□□□□□ -0.32
PTBP1-216ENST00000590887 GLT6D1Q7Z4J2 308 aa13.07□□□□□ -0.32
PTBP1-216ENST00000590887 SDCCAG8Q86SQ7 713 aaPredicted RBP13.07□□□□□ -0.32
PTBP1-216ENST00000590887 ETFBKMTQ8IXQ9 262 aa13.07□□□□□ -0.32
PTBP1-216ENST00000590887 LPCAT1Q8NF37 534 aa13.07□□□□□ -0.32
PTBP1-216ENST00000590887 DCAKDQ8WVC6 231 aa13.07□□□□□ -0.32
PTBP1-216ENST00000590887 PTPRN2Q92932 1015 aa13.07□□□□□ -0.32
PTBP1-216ENST00000590887 RSPRY1Q96DX4 576 aa13.07□□□□□ -0.32
PTBP1-216ENST00000590887 MRRFQ96E11 262 aaKnown RBP13.07□□□□□ -0.32
PTBP1-216ENST00000590887 MFSD3Q96ES6 412 aa13.07□□□□□ -0.32
PTBP1-216ENST00000590887 CABS1Q96KC9 395 aa13.07□□□□□ -0.32
PTBP1-216ENST00000590887 RPL10LQ96L21 214 aaKnown RBP13.07□□□□□ -0.32
PTBP1-216ENST00000590887 LRRC3BQ96PB8 259 aa13.07□□□□□ -0.32
PTBP1-216ENST00000590887 TRIB3Q96RU7 358 aa13.07□□□□□ -0.32
PTBP1-216ENST00000590887 TTC1Q99614 292 aa13.07□□□□□ -0.32
PTBP1-216ENST00000590887 HEPHQ9BQS7 1158 aa13.07□□□□□ -0.32
PTBP1-216ENST00000590887 TM6SF2Q9BZW4 377 aa13.07□□□□□ -0.32
PTBP1-216ENST00000590887 SUV39H2Q9H5I1 410 aa13.07□□□□□ -0.32
PTBP1-216ENST00000590887 POMKQ9H5K3 350 aa13.07□□□□□ -0.32
PTBP1-216ENST00000590887 BRD9Q9H8M2 597 aa13.07□□□□□ -0.32
PTBP1-216ENST00000590887 EVLQ9UI08 416 aaPredicted RBP13.07□□□□□ -0.32
PTBP1-216ENST00000590887 FAM50BQ9Y247 325 aa13.07□□□□□ -0.32
PTBP1-216ENST00000590887 VPS9D1Q9Y2B5 631 aa13.07□□□□□ -0.32
PTBP1-216ENST00000590887 PKP3Q9Y446 797 aa13.07□□□□□ -0.32
PTBP1-216ENST00000590887 PCDHGC4Q9Y5F7 938 aa13.07□□□□□ -0.32
PTBP1-216ENST00000590887 XIRP2A4UGR9 3374 aa13.06□□□□□ -0.32
PTBP1-216ENST00000590887 ANKRD36A6QL64 1941 aa13.06□□□□□ -0.32
PTBP1-216ENST00000590887 ZCWPW2A0A1B0GU75 182 aa13.06□□□□□ -0.32
PTBP1-216ENST00000590887 TBC1D3BA6NDS4 549 aa13.06□□□□□ -0.32
PTBP1-216ENST00000590887 MROH6A6NGR9 719 aa13.06□□□□□ -0.32
PTBP1-216ENST00000590887 WASH3PC4AMC7 463 aa13.06□□□□□ -0.32
PTBP1-216ENST00000590887 STX7O15400 261 aaKnown RBP13.06□□□□□ -0.32
PTBP1-216ENST00000590887 HTRA2O43464 458 aaPredicted RBP13.06□□□□□ -0.32
PTBP1-216ENST00000590887 FZD6O60353 706 aa13.06□□□□□ -0.32
PTBP1-216ENST00000590887 CYP2A6P11509 494 aaPredicted RBP13.06□□□□□ -0.32
PTBP1-216ENST00000590887 BRAFP15056 766 aa13.06□□□□□ -0.32
PTBP1-216ENST00000590887 NMBRP28336 390 aa13.06□□□□□ -0.32
PTBP1-216ENST00000590887 CHRNA4P43681 627 aa13.06□□□□□ -0.32
PTBP1-216ENST00000590887 RGRP47804 291 aa13.06□□□□□ -0.32
PTBP1-216ENST00000590887 PTPN5P54829 565 aa13.06□□□□□ -0.32
PTBP1-216ENST00000590887 CBX1P83916 185 aa13.06□□□□□ -0.32
PTBP1-216ENST00000590887 SMAD4Q13485 552 aaKnown RBP13.06□□□□□ -0.32
PTBP1-216ENST00000590887 OLIG2Q13516 323 aa13.06□□□□□ -0.32
PTBP1-216ENST00000590887 GALNT3Q14435 633 aa13.06□□□□□ -0.32
PTBP1-216ENST00000590887 DGKKQ5KSL6 1271 aa13.06□□□□□ -0.32
PTBP1-216ENST00000590887 ZDHHC20Q5W0Z9 365 aa13.06□□□□□ -0.32
PTBP1-216ENST00000590887 ASTLQ6HA08 431 aaPredicted RBP13.06□□□□□ -0.32
PTBP1-216ENST00000590887 BRAT1Q6PJG6 821 aa13.06□□□□□ -0.32
PTBP1-216ENST00000590887 DSG4Q86SJ6 1040 aa13.06□□□□□ -0.32
PTBP1-216ENST00000590887 TRABD2AQ86V40 505 aa13.06□□□□□ -0.32
PTBP1-216ENST00000590887 EXOC3L1Q86VI1 746 aa13.06□□□□□ -0.32
PTBP1-216ENST00000590887 ACMSDQ8TDX5 336 aa13.06□□□□□ -0.32
PTBP1-216ENST00000590887 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.06□□□□□ -0.326e-6■■□□□ 12.6
PTBP1-216ENST00000590887 FCRL3Q96P31 734 aaPredicted RBP13.06□□□□□ -0.32
PTBP1-216ENST00000590887 SELENOSQ9BQE4 189 aa13.06□□□□□ -0.32
PTBP1-216ENST00000590887 IQCGQ9H095 443 aaKnown RBP13.06□□□□□ -0.32
PTBP1-216ENST00000590887 KCNK9Q9NPC2 374 aa13.06□□□□□ -0.32
PTBP1-216ENST00000590887 TREX1Q9NSU2 369 aa13.06□□□□□ -0.32
PTBP1-216ENST00000590887 EURLQ9NYK6 297 aa13.06□□□□□ -0.32
PTBP1-216ENST00000590887 PCDHB9Q9Y5E1 797 aa13.06□□□□□ -0.32
PTBP1-216ENST00000590887 ACTL7AQ9Y615 435 aa13.06□□□□□ -0.32
PTBP1-216ENST00000590887 EDDM13A0A1B0GTR0 161 aa13.05□□□□□ -0.32
PTBP1-216ENST00000590887 TTC24A2A3L6 582 aaPredicted RBP13.05□□□□□ -0.32
PTBP1-216ENST00000590887 K7ERQ8 282 aa13.05□□□□□ -0.32
PTBP1-216ENST00000590887 SMAD6O43541 496 aaKnown RBP13.05□□□□□ -0.32
PTBP1-216ENST00000590887 SIN3BO75182 1162 aa13.05□□□□□ -0.32
PTBP1-216ENST00000590887 RPP40O75818 363 aaKnown RBP13.05□□□□□ -0.32
PTBP1-216ENST00000590887 FAM155BO75949 473 aa13.05□□□□□ -0.32
PTBP1-216ENST00000590887 VAPBO95292 243 aa13.05□□□□□ -0.32
PTBP1-216ENST00000590887 PRNPP04156 253 aa13.05□□□□□ -0.32
PTBP1-216ENST00000590887 ERVK-10P10266 1014 aa13.05□□□□□ -0.32
PTBP1-216ENST00000590887 XPAP23025 273 aaPredicted RBP13.05□□□□□ -0.32
PTBP1-216ENST00000590887 GCAP28676 217 aa13.05□□□□□ -0.32
PTBP1-216ENST00000590887 GJA4P35212 333 aa13.05□□□□□ -0.32
PTBP1-216ENST00000590887 LTBRP36941 435 aa13.05□□□□□ -0.32
PTBP1-216ENST00000590887 GRIA2P42262 883 aa13.05□□□□□ -0.32
PTBP1-216ENST00000590887 CCT5P48643 541 aa13.05□□□□□ -0.32
PTBP1-216ENST00000590887 NUMBP49757 651 aa13.05□□□□□ -0.32
PTBP1-216ENST00000590887 SUOXP51687 545 aa13.05□□□□□ -0.32
PTBP1-216ENST00000590887 CCNHP51946 323 aaPredicted RBP13.05□□□□□ -0.32
PTBP1-216ENST00000590887 DLX2Q07687 328 aaPredicted RBP13.05□□□□□ -0.32
PTBP1-216ENST00000590887 CCDC15Q0P6D6 951 aa13.05□□□□□ -0.32
PTBP1-216ENST00000590887 TRAF2Q12933 501 aa13.05□□□□□ -0.32
PTBP1-216ENST00000590887 CNGA3Q16281 694 aa13.05□□□□□ -0.32
PTBP1-216ENST00000590887 GEN1Q17RS7 908 aa13.05□□□□□ -0.32
PTBP1-216ENST00000590887 PUS10Q3MIT2 529 aaKnown RBP13.05□□□□□ -0.32
PTBP1-216ENST00000590887 FNDC3BQ53EP0 1204 aaKnown RBP13.05□□□□□ -0.32
PTBP1-216ENST00000590887 HSP90AA5PQ58FG0 334 aa13.05□□□□□ -0.32
PTBP1-216ENST00000590887 ATXN7L2Q5T6C5 722 aaPredicted RBP13.05□□□□□ -0.32
PTBP1-216ENST00000590887 UBAP2Q5T6F2 1119 aaKnown RBP13.05□□□□□ -0.32
PTBP1-216ENST00000590887 TEDDM1Q5T9Z0 273 aa13.05□□□□□ -0.32
PTBP1-216ENST00000590887 NEPROQ6NW34 567 aa13.05□□□□□ -0.32
PTBP1-216ENST00000590887 ESRP1Q6NXG1 681 aaKnown RBP13.05□□□□□ -0.32
PTBP1-216ENST00000590887 PARM1Q6UWI2 310 aa13.05□□□□□ -0.32
PTBP1-216ENST00000590887 PACS1Q6VY07 963 aa13.05□□□□□ -0.32
PTBP1-216ENST00000590887 GDPD4Q6W3E5 623 aa13.05□□□□□ -0.32
PTBP1-216ENST00000590887 TIFABQ6ZNK6 161 aa13.05□□□□□ -0.32
PTBP1-216ENST00000590887 USP45Q70EL2 814 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms