RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 PTAR1Q7Z6K3 402 aaPredicted RBP22.5■■□□□ 1.19
MBD3-208ENST00000590830 BBS5Q8N3I7 341 aa22.5■■□□□ 1.19
MBD3-208ENST00000590830 OXR1Q8N573 874 aa22.5■■□□□ 1.19
MBD3-208ENST00000590830 TP53I13Q8NBR0 393 aaPredicted RBP22.5■■□□□ 1.19
MBD3-208ENST00000590830 DENND6BQ8NEG7 585 aa22.5■■□□□ 1.19
MBD3-208ENST00000590830 TPCN2Q8NHX9 752 aa22.5■■□□□ 1.19
MBD3-208ENST00000590830 LGMNQ99538 433 aa22.5■■□□□ 1.19
MBD3-208ENST00000590830 BAG1Q99933 345 aaPredicted RBP22.5■■□□□ 1.19
MBD3-208ENST00000590830 RBM22Q9NW64 420 aaKnown RBP eCLIP22.5■■□□□ 1.191e-7■■■■■ 30.3
MBD3-208ENST00000590830 TOR4AQ9NXH8 423 aa22.5■■□□□ 1.19
MBD3-208ENST00000590830 DDX56Q9NY93 547 aaKnown RBP22.5■■□□□ 1.19
MBD3-208ENST00000590830 SPEGQ15772 3267 aa22.5■■□□□ 1.19
MBD3-208ENST00000590830 ITGAVP06756 1048 aa22.49■■□□□ 1.19
MBD3-208ENST00000590830 C6P13671 934 aa22.49■■□□□ 1.19
MBD3-208ENST00000590830 MX2P20592 715 aa22.49■■□□□ 1.19
MBD3-208ENST00000590830 IGFALSP35858 605 aa22.49■■□□□ 1.19
MBD3-208ENST00000590830 CDKN2BP42772 138 aa22.49■■□□□ 1.19
MBD3-208ENST00000590830 MARCKSL1P49006 195 aa22.49■■□□□ 1.19
MBD3-208ENST00000590830 FOXC1Q12948 553 aa22.49■■□□□ 1.19
MBD3-208ENST00000590830 FZD2Q14332 565 aa22.49■■□□□ 1.19
MBD3-208ENST00000590830 WSCD2Q2TBF2 565 aa22.49■■□□□ 1.19
MBD3-208ENST00000590830 ZNF542PQ5EBM4 170 aa22.49■■□□□ 1.19
MBD3-208ENST00000590830 FAM174AQ8TBP5 190 aa22.49■■□□□ 1.19
MBD3-208ENST00000590830 SPOCK2Q92563 424 aa22.49■■□□□ 1.19
MBD3-208ENST00000590830 HDAC11Q96DB2 347 aa22.49■■□□□ 1.19
MBD3-208ENST00000590830 SEMA3CQ99985 751 aa22.49■■□□□ 1.19
MBD3-208ENST00000590830 MAK16Q9BXY0 300 aaKnown RBP22.49■■□□□ 1.19
MBD3-208ENST00000590830 IMPACTQ9P2X3 320 aa22.49■■□□□ 1.19
MBD3-208ENST00000590830 HEY1Q9Y5J3 304 aa22.49■■□□□ 1.19
MBD3-208ENST00000590830 A8MX80 341 aa22.48■■□□□ 1.19
MBD3-208ENST00000590830 APOL1O14791 398 aa22.48■■□□□ 1.19
MBD3-208ENST00000590830 YKT6O15498 198 aa22.48■■□□□ 1.19
MBD3-208ENST00000590830 SDC3O75056 442 aa22.48■■□□□ 1.19
MBD3-208ENST00000590830 SOCS5O75159 536 aa22.48■■□□□ 1.19
MBD3-208ENST00000590830 ATXN1LP0C7T5 689 aaKnown RBP22.48■■□□□ 1.19
MBD3-208ENST00000590830 KRT10P13645 584 aa22.48■■□□□ 1.19
MBD3-208ENST00000590830 CCNB1P14635 433 aa22.48■■□□□ 1.19
MBD3-208ENST00000590830 GM2AP17900 193 aa22.48■■□□□ 1.19
MBD3-208ENST00000590830 SPINK2P20155 84 aa22.48■■□□□ 1.19
MBD3-208ENST00000590830 RABIFP47224 123 aa22.48■■□□□ 1.19
MBD3-208ENST00000590830 POLR2LP62875 67 aaKnown RBP22.48■■□□□ 1.19
MBD3-208ENST00000590830 SHC2P98077 582 aa22.48■■□□□ 1.19
MBD3-208ENST00000590830 ADCY2Q08462 1091 aa22.48■■□□□ 1.19
MBD3-208ENST00000590830 PTPRRQ15256 657 aa22.48■■□□□ 1.19
MBD3-208ENST00000590830 LLGL1Q15334 1064 aa22.48■■□□□ 1.19
MBD3-208ENST00000590830 RALGPS1Q5JS13 557 aa22.48■■□□□ 1.19
MBD3-208ENST00000590830 TIGD7Q6NT04 549 aaPredicted RBP22.48■■□□□ 1.19
MBD3-208ENST00000590830 C11orf63Q6NUN7 778 aa22.48■■□□□ 1.19
MBD3-208ENST00000590830 RFX6Q8HWS3 928 aa22.48■■□□□ 1.19
MBD3-208ENST00000590830 DCP2Q8IU60 420 aaKnown RBP22.48■■□□□ 1.19
MBD3-208ENST00000590830 SLC25A45Q8N413 288 aa22.48■■□□□ 1.19
MBD3-208ENST00000590830 PNPLA1Q8N8W4 532 aa22.48■■□□□ 1.19
MBD3-208ENST00000590830 CCNYQ8ND76 341 aa22.48■■□□□ 1.19
MBD3-208ENST00000590830 ARRDC2Q8TBH0 407 aa22.48■■□□□ 1.19
MBD3-208ENST00000590830 KRT35Q92764 455 aa22.48■■□□□ 1.19
MBD3-208ENST00000590830 CDC6Q99741 560 aa22.48■■□□□ 1.19
MBD3-208ENST00000590830 LUC7LQ9NQ29 371 aaKnown RBP22.48■■□□□ 1.19
MBD3-208ENST00000590830 A0A0U1RQJ8 604 aa22.47■■□□□ 1.19
MBD3-208ENST00000590830 SPTY2D1-AS1A0A0U1RR47 76 aa22.47■■□□□ 1.19
MBD3-208ENST00000590830 PSTPIP1O43586 416 aa22.47■■□□□ 1.19
MBD3-208ENST00000590830 FTH1P19P0C7X4 201 aa22.47■■□□□ 1.19
MBD3-208ENST00000590830 DSC2Q02487 901 aa22.47■■□□□ 1.19
MBD3-208ENST00000590830 ITKQ08881 620 aa22.47■■□□□ 1.19
MBD3-208ENST00000590830 NIPAL4Q0D2K0 466 aa22.47■■□□□ 1.19
MBD3-208ENST00000590830 ALG1LQ6GMV1 187 aa22.47■■□□□ 1.19
MBD3-208ENST00000590830 LIPIQ6XZB0 460 aa22.47■■□□□ 1.19
MBD3-208ENST00000590830 SPOCD1Q6ZMY3 1216 aa22.47■■□□□ 1.19
MBD3-208ENST00000590830 B4GALNT4Q76KP1 1039 aa22.47■■□□□ 1.19
MBD3-208ENST00000590830 DPPA4Q7L190 304 aa22.47■■□□□ 1.19
MBD3-208ENST00000590830 CCDC13Q8IYE1 715 aa22.47■■□□□ 1.19
MBD3-208ENST00000590830 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP22.47■■□□□ 1.19
MBD3-208ENST00000590830 EID2Q8N6I1 236 aa22.47■■□□□ 1.19
MBD3-208ENST00000590830 TRAF3IP1Q8TDR0 691 aaPredicted RBP22.47■■□□□ 1.19
MBD3-208ENST00000590830 PDCD6IPQ8WUM4 868 aaKnown RBP22.47■■□□□ 1.19
MBD3-208ENST00000590830 OLFM3Q96PB7 478 aa22.47■■□□□ 1.19
MBD3-208ENST00000590830 UCKL1Q9NWZ5 548 aa22.47■■□□□ 1.19
MBD3-208ENST00000590830 B4GALT6Q9UBX8 382 aa22.47■■□□□ 1.19
MBD3-208ENST00000590830 KLF15Q9UIH9 416 aa22.47■■□□□ 1.19
MBD3-208ENST00000590830 RAI2Q9Y5P3 530 aa22.47■■□□□ 1.19
MBD3-208ENST00000590830 TP53BP1Q12888 1972 aaPredicted RBP22.47■■□□□ 1.19
MBD3-208ENST00000590830 CFAP69A5D8W1 941 aa22.46■■□□□ 1.19
MBD3-208ENST00000590830 BTNL10A8MVZ5 291 aa22.46■■□□□ 1.19
MBD3-208ENST00000590830 KCNK1O00180 336 aa22.46■■□□□ 1.19
MBD3-208ENST00000590830 PJA2O43164 708 aa22.46■■□□□ 1.19
MBD3-208ENST00000590830 PGLSO95336 258 aa22.46■■□□□ 1.19
MBD3-208ENST00000590830 JCHAINP01591 159 aa22.46■■□□□ 1.19
MBD3-208ENST00000590830 HLA-DQB2P05538 268 aa22.46■■□□□ 1.19
MBD3-208ENST00000590830 PDHA1P08559 390 aa22.46■■□□□ 1.19
MBD3-208ENST00000590830 DYNLT1P63172 113 aa22.46■■□□□ 1.19
MBD3-208ENST00000590830 PPIDQ08752 370 aaKnown RBP22.46■■□□□ 1.19
MBD3-208ENST00000590830 AGERQ15109 404 aa22.46■■□□□ 1.19
MBD3-208ENST00000590830 IRF4Q15306 451 aa22.46■■□□□ 1.19
MBD3-208ENST00000590830 KATNAL2Q8IYT4 538 aa22.46■■□□□ 1.19
MBD3-208ENST00000590830 CNTD1Q8N815 330 aa22.46■■□□□ 1.19
MBD3-208ENST00000590830 PIH1D2Q8WWB5 315 aa22.46■■□□□ 1.19
MBD3-208ENST00000590830 SMIM14Q96QK8 99 aa22.46■■□□□ 1.19
MBD3-208ENST00000590830 IL12RB2Q99665 862 aa22.46■■□□□ 1.19
MBD3-208ENST00000590830 POLR1EQ9GZS1 481 aaKnown RBP22.46■■□□□ 1.19
MBD3-208ENST00000590830 SAE1Q9UBE0 346 aaPredicted RBP22.46■■□□□ 1.19
MBD3-208ENST00000590830 ANGPTL2Q9UKU9 493 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms