RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 UPK3BL2E5RIL1 263 aa12.13□□□□□ -0.47
APOC1-206ENST00000590334 PLK4O00444 970 aa12.13□□□□□ -0.47
APOC1-206ENST00000590334 DLL1O00548 723 aa12.13□□□□□ -0.47
APOC1-206ENST00000590334 SPINT1O43278 529 aa12.13□□□□□ -0.47
APOC1-206ENST00000590334 RAD51CO43502 376 aa12.13□□□□□ -0.47
APOC1-206ENST00000590334 PLRG1O43660 514 aaKnown RBP12.13□□□□□ -0.47
APOC1-206ENST00000590334 TRBC1P01850 177 aa12.13□□□□□ -0.47
APOC1-206ENST00000590334 ATXN1LP0C7T5 689 aaKnown RBP12.13□□□□□ -0.47
APOC1-206ENST00000590334 HLA-DPA1P20036 260 aa12.13□□□□□ -0.47
APOC1-206ENST00000590334 TPSB2P20231 275 aa12.13□□□□□ -0.47
APOC1-206ENST00000590334 ABL2P42684 1182 aa12.13□□□□□ -0.47
APOC1-206ENST00000590334 KCNJ11Q14654 390 aa12.13□□□□□ -0.47
APOC1-206ENST00000590334 ANGPT1Q15389 498 aa12.13□□□□□ -0.47
APOC1-206ENST00000590334 TPSAB1Q15661 275 aa12.13□□□□□ -0.47
APOC1-206ENST00000590334 PCSK7Q16549 785 aa12.13□□□□□ -0.47
APOC1-206ENST00000590334 GLE1Q53GS7 698 aaKnown RBP12.13□□□□□ -0.47
APOC1-206ENST00000590334 SIRPB2Q5JXA9 342 aa12.13□□□□□ -0.47
APOC1-206ENST00000590334 DENND5AQ6IQ26 1287 aa12.13□□□□□ -0.47
APOC1-206ENST00000590334 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.13□□□□□ -0.47
APOC1-206ENST00000590334 LINC00523Q86TU6 105 aa12.13□□□□□ -0.47
APOC1-206ENST00000590334 TTC7BQ86TV6 843 aa12.13□□□□□ -0.47
APOC1-206ENST00000590334 NDUFAF2Q8N183 169 aa12.13□□□□□ -0.47
APOC1-206ENST00000590334 PDCD7Q8N8D1 485 aaKnown RBP12.13□□□□□ -0.47
APOC1-206ENST00000590334 NOA1Q8NC60 698 aaKnown RBP12.13□□□□□ -0.47
APOC1-206ENST00000590334 IPMKQ8NFU5 416 aa12.13□□□□□ -0.47
APOC1-206ENST00000590334 PDCD6IPQ8WUM4 868 aaKnown RBP12.13□□□□□ -0.47
APOC1-206ENST00000590334 LRRC45Q96CN5 670 aa12.13□□□□□ -0.47
APOC1-206ENST00000590334 SCRN2Q96FV2 425 aa12.13□□□□□ -0.47
APOC1-206ENST00000590334 LYSMD1Q96S90 227 aa12.13□□□□□ -0.47
APOC1-206ENST00000590334 TBL1YQ9BQ87 522 aa12.13□□□□□ -0.47
APOC1-206ENST00000590334 TRIM51Q9BSJ1 452 aa12.13□□□□□ -0.47
APOC1-206ENST00000590334 FSD1LQ9BXM9 530 aa12.13□□□□□ -0.47
APOC1-206ENST00000590334 TPSD1Q9BZJ3 242 aa12.13□□□□□ -0.47
APOC1-206ENST00000590334 SGK2Q9HBY8 427 aa12.13□□□□□ -0.47
APOC1-206ENST00000590334 CD93Q9NPY3 652 aa12.13□□□□□ -0.47
APOC1-206ENST00000590334 WSB2Q9NYS7 404 aaPredicted RBP12.13□□□□□ -0.47
APOC1-206ENST00000590334 FADS3Q9Y5Q0 445 aa12.13□□□□□ -0.47
APOC1-206ENST00000590334 ZDBF2Q9HCK1 2354 aa12.12□□□□□ -0.47
APOC1-206ENST00000590334 CAPN8A6NHC0 703 aa12.12□□□□□ -0.47
APOC1-206ENST00000590334 BHMG1C9JSJ3 638 aaPredicted RBP12.12□□□□□ -0.47
APOC1-206ENST00000590334 E7EVH7 732 aa12.12□□□□□ -0.47
APOC1-206ENST00000590334 DNALI1O14645 258 aaPredicted RBP12.12□□□□□ -0.47
APOC1-206ENST00000590334 RIOK3O14730 519 aaKnown RBP12.12□□□□□ -0.47
APOC1-206ENST00000590334 AGTP01019 485 aa12.12□□□□□ -0.47
APOC1-206ENST00000590334 FGF1P05230 155 aa12.12□□□□□ -0.47
APOC1-206ENST00000590334 APRTP07741 180 aa12.12□□□□□ -0.47
APOC1-206ENST00000590334 SP9P0CG40 484 aa12.12□□□□□ -0.47
APOC1-206ENST00000590334 NFKBIAP25963 317 aa12.12□□□□□ -0.47
APOC1-206ENST00000590334 CD6P30203 668 aa12.12□□□□□ -0.47
APOC1-206ENST00000590334 MMP12P39900 470 aa12.12□□□□□ -0.47
APOC1-206ENST00000590334 ADCY8P40145 1251 aa12.12□□□□□ -0.47
APOC1-206ENST00000590334 FNTBP49356 437 aa12.12□□□□□ -0.47
APOC1-206ENST00000590334 VPS41P49754 854 aa12.12□□□□□ -0.47
APOC1-206ENST00000590334 ADPRHP54922 357 aa12.12□□□□□ -0.47
APOC1-206ENST00000590334 BASP1P80723 227 aaKnown RBP12.12□□□□□ -0.47
APOC1-206ENST00000590334 ELP6Q0PNE2 266 aa12.12□□□□□ -0.47
APOC1-206ENST00000590334 GALNT3Q14435 633 aa12.12□□□□□ -0.47
APOC1-206ENST00000590334 QPCTQ16769 361 aa12.12□□□□□ -0.47
APOC1-206ENST00000590334 KCTD19Q17RG1 926 aaPredicted RBP12.12□□□□□ -0.47
APOC1-206ENST00000590334 USP39Q53GS9 565 aaKnown RBP12.12□□□□□ -0.47
APOC1-206ENST00000590334 RNASEH2BQ5TBB1 312 aaKnown RBP12.12□□□□□ -0.47
APOC1-206ENST00000590334 DUPD1Q68J44 220 aa12.12□□□□□ -0.47
APOC1-206ENST00000590334 NAPEPLDQ6IQ20 393 aa12.12□□□□□ -0.47
APOC1-206ENST00000590334 CCDC70Q6NSX1 233 aa12.12□□□□□ -0.47
APOC1-206ENST00000590334 C8orf74Q6P047 294 aa12.12□□□□□ -0.47
APOC1-206ENST00000590334 NEK5Q6P3R8 708 aa12.12□□□□□ -0.47
APOC1-206ENST00000590334 DPPA4Q7L190 304 aa12.12□□□□□ -0.47
APOC1-206ENST00000590334 PCGF5Q86SE9 256 aa12.12□□□□□ -0.47
APOC1-206ENST00000590334 TAB3Q8N5C8 712 aaPredicted RBP12.12□□□□□ -0.47
APOC1-206ENST00000590334 ZBTB44Q8NCP5 570 aa12.12□□□□□ -0.47
APOC1-206ENST00000590334 LPCAT1Q8NF37 534 aa12.12□□□□□ -0.47
APOC1-206ENST00000590334 SEC14L1Q92503 715 aa12.12□□□□□ -0.47
APOC1-206ENST00000590334 CPT1BQ92523 772 aa12.12□□□□□ -0.47
APOC1-206ENST00000590334 SRPK1Q96SB4 655 aaKnown RBP12.12□□□□□ -0.47
APOC1-206ENST00000590334 ERP44Q9BS26 406 aa12.12□□□□□ -0.47
APOC1-206ENST00000590334 LRRC1Q9BTT6 524 aa12.12□□□□□ -0.47
APOC1-206ENST00000590334 FICDQ9BVA6 458 aa12.12□□□□□ -0.47
APOC1-206ENST00000590334 BTBD1Q9H0C5 482 aa12.12□□□□□ -0.47
APOC1-206ENST00000590334 PREBQ9HCU5 417 aa12.12□□□□□ -0.47
APOC1-206ENST00000590334 PCDH12Q9NPG4 1184 aa12.12□□□□□ -0.47
APOC1-206ENST00000590334 ASIC3Q9UHC3 531 aa12.12□□□□□ -0.47
APOC1-206ENST00000590334 VPS13AQ96RL7 3174 aa12.12□□□□□ -0.47
APOC1-206ENST00000590334 FRYLO94915 3013 aa12.12□□□□□ -0.47
APOC1-206ENST00000590334 DOCK9Q9BZ29 2069 aa12.11□□□□□ -0.47
APOC1-206ENST00000590334 THADAQ6YHU6 1953 aa12.11□□□□□ -0.47
APOC1-206ENST00000590334 H0Y858 1186 aa12.11□□□□□ -0.47
APOC1-206ENST00000590334 TP73O15350 636 aa12.11□□□□□ -0.47
APOC1-206ENST00000590334 TSPAN6O43657 245 aa12.11□□□□□ -0.47
APOC1-206ENST00000590334 XPAP23025 273 aaPredicted RBP12.11□□□□□ -0.47
APOC1-206ENST00000590334 ACSL1P33121 698 aa12.11□□□□□ -0.47
APOC1-206ENST00000590334 CNR2P34972 360 aa12.11□□□□□ -0.47
APOC1-206ENST00000590334 HNF1BP35680 557 aa12.11□□□□□ -0.47
APOC1-206ENST00000590334 TNNT3P45378 269 aaPredicted RBP12.11□□□□□ -0.47
APOC1-206ENST00000590334 EPHB1P54762 984 aa12.11□□□□□ -0.47
APOC1-206ENST00000590334 DRG2P55039 364 aaKnown RBP12.11□□□□□ -0.47
APOC1-206ENST00000590334 MSLNQ13421 630 aaPredicted RBP12.11□□□□□ -0.47
APOC1-206ENST00000590334 OLIG2Q13516 323 aa12.11□□□□□ -0.47
APOC1-206ENST00000590334 TMEM52BQ4KMG9 183 aa12.11□□□□□ -0.47
APOC1-206ENST00000590334 ERAP2Q6P179 960 aa12.11□□□□□ -0.47
APOC1-206ENST00000590334 USP45Q70EL2 814 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms