RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	GRID2IP	A4D2P6	1211 aa		17.43	■□□□□ 0.38
MBD1-221	ENST00000589867	APOL1	O14791	398 aa		17.43	■□□□□ 0.38
MBD1-221	ENST00000589867	FZD6	O60353	706 aa		17.43	■□□□□ 0.38
MBD1-221	ENST00000589867	HLA-DQB2	P05538	268 aa		17.43	■□□□□ 0.38
MBD1-221	ENST00000589867	THEGL	P0DJG4	465 aa		17.43	■□□□□ 0.38
MBD1-221	ENST00000589867	KCNA4	P22459	653 aa		17.43	■□□□□ 0.38
MBD1-221	ENST00000589867	PML	P29590	882 aa		17.43	■□□□□ 0.38
MBD1-221	ENST00000589867	IGFALS	P35858	605 aa		17.43	■□□□□ 0.38
MBD1-221	ENST00000589867	CCT8	P50990	548 aa		17.43	■□□□□ 0.38
MBD1-221	ENST00000589867	PFN3	P60673	137 aa		17.43	■□□□□ 0.38
MBD1-221	ENST00000589867	BNIP3	Q12983	259 aa		17.43	■□□□□ 0.38
MBD1-221	ENST00000589867	ZBTB17	Q13105	803 aa		17.43	■□□□□ 0.38
MBD1-221	ENST00000589867	KYAT3	Q6YP21	454 aa	Known RBP	17.43	■□□□□ 0.38
MBD1-221	ENST00000589867	SPOCD1	Q6ZMY3	1216 aa		17.43	■□□□□ 0.38
MBD1-221	ENST00000589867		Q6ZSR6	202 aa		17.43	■□□□□ 0.38
MBD1-221	ENST00000589867	B4GALNT4	Q76KP1	1039 aa		17.43	■□□□□ 0.38
MBD1-221	ENST00000589867	ZSCAN30	Q86W11	494 aa		17.43	■□□□□ 0.38
MBD1-221	ENST00000589867	GATAD2A	Q86YP4	633 aa		17.43	■□□□□ 0.38
MBD1-221	ENST00000589867	KATNAL2	Q8IYT4	538 aa		17.43	■□□□□ 0.38
MBD1-221	ENST00000589867	SAP25	Q8TEE9	199 aa		17.43	■□□□□ 0.38
MBD1-221	ENST00000589867	KLHDC7B	Q96G42	594 aa		17.43	■□□□□ 0.38
MBD1-221	ENST00000589867	SMIM14	Q96QK8	99 aa		17.43	■□□□□ 0.38
MBD1-221	ENST00000589867	IL12RB2	Q99665	862 aa		17.43	■□□□□ 0.38
MBD1-221	ENST00000589867	SCUBE2	Q9NQ36	999 aa		17.43	■□□□□ 0.38
MBD1-221	ENST00000589867	SAE1	Q9UBE0	346 aa	Predicted RBP	17.43	■□□□□ 0.38
MBD1-221	ENST00000589867	hCG_1818297	A0A087WSY0	165 aa		17.42	■□□□□ 0.38
MBD1-221	ENST00000589867	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	17.42	■□□□□ 0.38
MBD1-221	ENST00000589867	NEMP1	O14524	444 aa		17.42	■□□□□ 0.38
MBD1-221	ENST00000589867	SOCS5	O75159	536 aa		17.42	■□□□□ 0.38
MBD1-221	ENST00000589867	MMP2	P08253	660 aa		17.42	■□□□□ 0.38
MBD1-221	ENST00000589867	C6	P13671	934 aa		17.42	■□□□□ 0.38
MBD1-221	ENST00000589867	CCNB1	P14635	433 aa		17.42	■□□□□ 0.38
MBD1-221	ENST00000589867	PECAM1	P16284	738 aa	Predicted RBP	17.42	■□□□□ 0.38
MBD1-221	ENST00000589867	EPHA8	P29322	1005 aa	Predicted RBP	17.42	■□□□□ 0.38
MBD1-221	ENST00000589867	FOXK2	Q01167	660 aa		17.42	■□□□□ 0.38
MBD1-221	ENST00000589867	DSC2	Q02487	901 aa		17.42	■□□□□ 0.38
MBD1-221	ENST00000589867	WSCD2	Q2TBF2	565 aa		17.42	■□□□□ 0.38
MBD1-221	ENST00000589867	SLC45A4	Q5BKX6	768 aa		17.42	■□□□□ 0.38
MBD1-221	ENST00000589867	DAAM2	Q86T65	1068 aa		17.42	■□□□□ 0.38
MBD1-221	ENST00000589867	RFX6	Q8HWS3	928 aa		17.42	■□□□□ 0.38
MBD1-221	ENST00000589867	CCDC13	Q8IYE1	715 aa		17.42	■□□□□ 0.38
MBD1-221	ENST00000589867	CBARP	Q8N350	705 aa	Predicted RBP	17.42	■□□□□ 0.38
MBD1-221	ENST00000589867	DENND6B	Q8NEG7	585 aa		17.42	■□□□□ 0.38
MBD1-221	ENST00000589867	SEMA3C	Q99985	751 aa		17.42	■□□□□ 0.38
MBD1-221	ENST00000589867	RBM22	Q9NW64	420 aa	Known RBP eCLIP	17.42	■□□□□ 0.38
MBD1-221	ENST00000589867	TOR4A	Q9NXH8	423 aa		17.42	■□□□□ 0.38
MBD1-221	ENST00000589867	PNMA8B	Q9ULN7	279 aa	Predicted RBP	17.42	■□□□□ 0.38
MBD1-221	ENST00000589867	HEY1	Q9Y5J3	304 aa		17.42	■□□□□ 0.38
MBD1-221	ENST00000589867	FRY	Q5TBA9	3013 aa		17.41	■□□□□ 0.38
MBD1-221	ENST00000589867	KCNK1	O00180	336 aa		17.41	■□□□□ 0.38
MBD1-221	ENST00000589867	DFNA5	O60443	496 aa		17.41	■□□□□ 0.38
MBD1-221	ENST00000589867	TM7SF2	O76062	418 aa		17.41	■□□□□ 0.38
MBD1-221	ENST00000589867	PGLS	O95336	258 aa		17.41	■□□□□ 0.38
MBD1-221	ENST00000589867	TOP3B	O95985	862 aa	Known RBP	17.41	■□□□□ 0.38
MBD1-221	ENST00000589867	PRL	P01236	227 aa		17.41	■□□□□ 0.38
MBD1-221	ENST00000589867	PDHA1	P08559	390 aa		17.41	■□□□□ 0.38
MBD1-221	ENST00000589867	MX2	P20592	715 aa		17.41	■□□□□ 0.38
MBD1-221	ENST00000589867	LIG3	P49916	1009 aa		17.41	■□□□□ 0.38
MBD1-221	ENST00000589867	PEX5	P50542	639 aa		17.41	■□□□□ 0.38
MBD1-221	ENST00000589867	DYNLT1	P63172	113 aa		17.41	■□□□□ 0.38
MBD1-221	ENST00000589867	IFI35	P80217	286 aa	Predicted RBP	17.41	■□□□□ 0.38
MBD1-221	ENST00000589867	ELP6	Q0PNE2	266 aa		17.41	■□□□□ 0.38
MBD1-221	ENST00000589867	SGCG	Q13326	291 aa		17.41	■□□□□ 0.38
MBD1-221	ENST00000589867	FZD2	Q14332	565 aa		17.41	■□□□□ 0.38
MBD1-221	ENST00000589867	AGER	Q15109	404 aa		17.41	■□□□□ 0.38
MBD1-221	ENST00000589867	RALGPS1	Q5JS13	557 aa		17.41	■□□□□ 0.38
MBD1-221	ENST00000589867	TIGD7	Q6NT04	549 aa	Predicted RBP	17.41	■□□□□ 0.38
MBD1-221	ENST00000589867	LIPI	Q6XZB0	460 aa		17.41	■□□□□ 0.38
MBD1-221	ENST00000589867	DPPA4	Q7L190	304 aa		17.41	■□□□□ 0.38
MBD1-221	ENST00000589867	CXorf40A	Q8TE69	158 aa		17.41	■□□□□ 0.38
MBD1-221	ENST00000589867	PIH1D2	Q8WWB5	315 aa		17.41	■□□□□ 0.38
MBD1-221	ENST00000589867	FUBP1	Q96AE4	644 aa	Known RBP	17.41	■□□□□ 0.38
MBD1-221	ENST00000589867	SKA1	Q96BD8	255 aa		17.41	■□□□□ 0.38
MBD1-221	ENST00000589867	ANP32E	Q9BTT0	268 aa		17.41	■□□□□ 0.38
MBD1-221	ENST00000589867	SLC32A1	Q9H598	525 aa		17.41	■□□□□ 0.38
MBD1-221	ENST00000589867	LUC7L	Q9NQ29	371 aa	Known RBP	17.41	■□□□□ 0.38
MBD1-221	ENST00000589867	B4GALT6	Q9UBX8	382 aa		17.41	■□□□□ 0.38
MBD1-221	ENST00000589867	KLF15	Q9UIH9	416 aa		17.41	■□□□□ 0.38
MBD1-221	ENST00000589867	PPIL1	Q9Y3C6	166 aa		17.41	■□□□□ 0.38
MBD1-221	ENST00000589867	COL5A1	P20908	1838 aa	Predicted RBP	17.4	■□□□□ 0.38
MBD1-221	ENST00000589867		A0A0U1RQS6	177 aa		17.4	■□□□□ 0.38
MBD1-221	ENST00000589867		A6NNZ2	444 aa		17.4	■□□□□ 0.38
MBD1-221	ENST00000589867	FLRT2	O43155	660 aa		17.4	■□□□□ 0.38
MBD1-221	ENST00000589867	JCHAIN	P01591	159 aa		17.4	■□□□□ 0.38
MBD1-221	ENST00000589867	GIMD1	P0DJR0	217 aa		17.4	■□□□□ 0.38
MBD1-221	ENST00000589867	LHCGR	P22888	699 aa		17.4	■□□□□ 0.38
MBD1-221	ENST00000589867	CTNNA1	P35221	906 aa	Known RBP	17.4	■□□□□ 0.38
MBD1-221	ENST00000589867	IRF4	Q15306	451 aa		17.4	■□□□□ 0.38
MBD1-221	ENST00000589867	NYAP1	Q6ZVC0	841 aa		17.4	■□□□□ 0.38
MBD1-221	ENST00000589867	PTAR1	Q7Z6K3	402 aa	Predicted RBP	17.4	■□□□□ 0.38
MBD1-221	ENST00000589867	GLRX5	Q86SX6	157 aa		17.4	■□□□□ 0.38
MBD1-221	ENST00000589867	PELI3	Q8N2H9	469 aa		17.4	■□□□□ 0.38
MBD1-221	ENST00000589867	CCNY	Q8ND76	341 aa		17.4	■□□□□ 0.38
MBD1-221	ENST00000589867	EXD1	Q8NHP7	514 aa		17.4	■□□□□ 0.38
MBD1-221	ENST00000589867	NSMCE1	Q8WV22	266 aa		17.4	■□□□□ 0.38
MBD1-221	ENST00000589867	ALG3	Q92685	438 aa		17.4	■□□□□ 0.38
MBD1-221	ENST00000589867	AMACR	Q9UHK6	382 aa		17.4	■□□□□ 0.38
MBD1-221	ENST00000589867	PCDHB9	Q9Y5E1	797 aa		17.4	■□□□□ 0.38
MBD1-221	ENST00000589867	PCDHA3	Q9Y5H8	950 aa		17.4	■□□□□ 0.38
MBD1-221	ENST00000589867	RAI2	Q9Y5P3	530 aa		17.4	■□□□□ 0.38

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