RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 DEFB107AQ8IZN7 70 aa19.28■□□□□ 0.68
PRKCSH-209ENST00000589838 HDAC10Q969S8 669 aa19.28■□□□□ 0.68
PRKCSH-209ENST00000589838 TTPALQ9BTX7 342 aa19.28■□□□□ 0.68
PRKCSH-209ENST00000589838 TTLL2Q9BWV7 592 aa19.28■□□□□ 0.68
PRKCSH-209ENST00000589838 NUF2Q9BZD4 464 aa19.28■□□□□ 0.68
PRKCSH-209ENST00000589838 MAGEH1Q9H213 219 aa19.28■□□□□ 0.68
PRKCSH-209ENST00000589838 WDR55Q9H6Y2 383 aaPredicted RBP19.28■□□□□ 0.68
PRKCSH-209ENST00000589838 NDE1Q9NXR1 346 aa19.28■□□□□ 0.68
PRKCSH-209ENST00000589838 CDH22Q9UJ99 828 aa19.28■□□□□ 0.68
PRKCSH-209ENST00000589838 DNMT3LQ9UJW3 386 aa19.28■□□□□ 0.68
PRKCSH-209ENST00000589838 RIMKLBQ9ULI2 386 aa19.28■□□□□ 0.68
PRKCSH-209ENST00000589838 NEMP1O14524 444 aa19.27■□□□□ 0.68
PRKCSH-209ENST00000589838 ATP5C1P36542 298 aaKnown RBP19.27■□□□□ 0.68
PRKCSH-209ENST00000589838 PPARGP37231 505 aaPredicted RBP19.27■□□□□ 0.68
PRKCSH-209ENST00000589838 SATB1Q01826 763 aa19.27■□□□□ 0.68
PRKCSH-209ENST00000589838 ACVR1Q04771 509 aa19.27■□□□□ 0.68
PRKCSH-209ENST00000589838 HERC3Q15034 1050 aa19.27■□□□□ 0.68
PRKCSH-209ENST00000589838 RALGPS1Q5JS13 557 aa19.27■□□□□ 0.68
PRKCSH-209ENST00000589838 TRIM68Q6AZZ1 485 aa19.27■□□□□ 0.68
PRKCSH-209ENST00000589838 FAM45BPQ6NSW5 357 aa19.27■□□□□ 0.68
PRKCSH-209ENST00000589838 LGI2Q8N0V4 545 aa19.27■□□□□ 0.68
PRKCSH-209ENST00000589838 SPATA6LQ8N4H0 392 aa19.27■□□□□ 0.68
PRKCSH-209ENST00000589838 PDZD8Q8NEN9 1154 aa19.27■□□□□ 0.68
PRKCSH-209ENST00000589838 FAM45AQ8TCE6 357 aa19.27■□□□□ 0.68
PRKCSH-209ENST00000589838 NRG4Q8WWG1 115 aa19.27■□□□□ 0.68
PRKCSH-209ENST00000589838 LENG8Q96PV6 779 aaPredicted RBP19.27■□□□□ 0.68
PRKCSH-209ENST00000589838 NDNQ99608 321 aa19.27■□□□□ 0.68
PRKCSH-209ENST00000589838 CFHR5Q9BXR6 569 aa19.27■□□□□ 0.68
PRKCSH-209ENST00000589838 CCSER2Q9H7U1 834 aa19.27■□□□□ 0.68
PRKCSH-209ENST00000589838 TRPC7Q9HCX4 862 aa19.27■□□□□ 0.68
PRKCSH-209ENST00000589838 ACSL4O60488 711 aa19.26■□□□□ 0.67
PRKCSH-209ENST00000589838 VNN2O95498 520 aa19.26■□□□□ 0.67
PRKCSH-209ENST00000589838 S1PR4O95977 384 aa19.26■□□□□ 0.67
PRKCSH-209ENST00000589838 INHAP05111 366 aa19.26■□□□□ 0.67
PRKCSH-209ENST00000589838 GALTP07902 379 aa19.26■□□□□ 0.67
PRKCSH-209ENST00000589838 SERPINF2P08697 491 aa19.26■□□□□ 0.67
PRKCSH-209ENST00000589838 CCDC166P0CW27 439 aa19.26■□□□□ 0.67
PRKCSH-209ENST00000589838 EPHA3P29320 983 aa19.26■□□□□ 0.67
PRKCSH-209ENST00000589838 ACVRL1P37023 503 aa19.26■□□□□ 0.67
PRKCSH-209ENST00000589838 SLC11A2P49281 568 aa19.26■□□□□ 0.67
PRKCSH-209ENST00000589838 TBL3Q12788 808 aaKnown RBP19.26■□□□□ 0.67
PRKCSH-209ENST00000589838 NXNQ6DKJ4 435 aa19.26■□□□□ 0.67
PRKCSH-209ENST00000589838 NADSYN1Q6IA69 706 aa19.26■□□□□ 0.67
PRKCSH-209ENST00000589838 CIR1Q86X95 450 aaPredicted RBP19.26■□□□□ 0.67
PRKCSH-209ENST00000589838 FBXW8Q8N3Y1 598 aa19.26■□□□□ 0.67
PRKCSH-209ENST00000589838 KDM1BQ8NB78 822 aa19.26■□□□□ 0.67
PRKCSH-209ENST00000589838 TXNDC5Q8NBS9 432 aaKnown RBP19.26■□□□□ 0.67
PRKCSH-209ENST00000589838 GIPC2Q8TF65 315 aa19.26■□□□□ 0.67
PRKCSH-209ENST00000589838 OVCA2Q8WZ82 227 aa19.26■□□□□ 0.67
PRKCSH-209ENST00000589838 SERPINI1Q99574 410 aa19.26■□□□□ 0.67
PRKCSH-209ENST00000589838 OLFM1Q99784 485 aa19.26■□□□□ 0.67
PRKCSH-209ENST00000589838 SHCBP1LQ9BZQ2 653 aa19.26■□□□□ 0.67
PRKCSH-209ENST00000589838 CRISPLD1Q9H336 500 aa19.26■□□□□ 0.67
PRKCSH-209ENST00000589838 PRPF19Q9UMS4 504 aaKnown RBP19.26■□□□□ 0.67
PRKCSH-209ENST00000589838 AURKAO14965 403 aa19.26■□□□□ 0.67
PRKCSH-209ENST00000589838 LDB2O43679 373 aa19.26■□□□□ 0.67
PRKCSH-209ENST00000589838 AOC2O75106 756 aa19.26■□□□□ 0.67
PRKCSH-209ENST00000589838 IPO13O94829 963 aaKnown RBP19.26■□□□□ 0.67
PRKCSH-209ENST00000589838 GLP2RO95838 553 aa19.26■□□□□ 0.67
PRKCSH-209ENST00000589838 PENKP01210 267 aaPredicted RBP19.26■□□□□ 0.67
PRKCSH-209ENST00000589838 CCR10P46092 362 aa19.26■□□□□ 0.67
PRKCSH-209ENST00000589838 TUFMP49411 452 aaKnown RBP19.26■□□□□ 0.67
PRKCSH-209ENST00000589838 EPHB1P54762 984 aa19.26■□□□□ 0.67
PRKCSH-209ENST00000589838 BLMHQ13867 455 aa19.26■□□□□ 0.67
PRKCSH-209ENST00000589838 CYLC2Q14093 348 aaPredicted RBP19.26■□□□□ 0.67
PRKCSH-209ENST00000589838 ZNF789Q5FWF6 425 aa19.26■□□□□ 0.67
PRKCSH-209ENST00000589838 RTP2Q5QGT7 225 aa19.26■□□□□ 0.67
PRKCSH-209ENST00000589838 MRNIPQ6NTE8 343 aa19.26■□□□□ 0.67
PRKCSH-209ENST00000589838 RSPO2Q6UXX9 243 aaPredicted RBP19.26■□□□□ 0.67
PRKCSH-209ENST00000589838 GPR150Q8NGU9 434 aa19.26■□□□□ 0.67
PRKCSH-209ENST00000589838 BRSK1Q8TDC3 778 aa19.26■□□□□ 0.67
PRKCSH-209ENST00000589838 UBXN10Q96LJ8 280 aa19.26■□□□□ 0.67
PRKCSH-209ENST00000589838 CYP4F11Q9HBI6 524 aa19.26■□□□□ 0.67
PRKCSH-209ENST00000589838 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.26■□□□□ 0.678e-6■■□□□ 11.8
PRKCSH-209ENST00000589838 LRCH1Q9Y2L9 728 aa19.26■□□□□ 0.67
PRKCSH-209ENST00000589838 GATMP50440 423 aa19.25■□□□□ 0.67
PRKCSH-209ENST00000589838 CDH4P55283 916 aa19.25■□□□□ 0.67
PRKCSH-209ENST00000589838 NSUN2Q08J23 767 aaKnown RBP eCLIP19.25■□□□□ 0.67
PRKCSH-209ENST00000589838 GALNT1Q10472 559 aaPredicted RBP19.25■□□□□ 0.67
PRKCSH-209ENST00000589838 IHHQ14623 411 aa19.25■□□□□ 0.67
PRKCSH-209ENST00000589838 ALG1LQ6GMV1 187 aa19.25■□□□□ 0.67
PRKCSH-209ENST00000589838 RNF135Q8IUD6 432 aa19.25■□□□□ 0.67
PRKCSH-209ENST00000589838 MOCOSQ96EN8 888 aa19.25■□□□□ 0.67
PRKCSH-209ENST00000589838 SGF29Q96ES7 293 aa19.25■□□□□ 0.67
PRKCSH-209ENST00000589838 ZNF385DQ9H6B1 395 aa19.25■□□□□ 0.67
PRKCSH-209ENST00000589838 PDFQ9HBH1 243 aa19.25■□□□□ 0.67
PRKCSH-209ENST00000589838 S100A14Q9HCY8 104 aa19.25■□□□□ 0.67
PRKCSH-209ENST00000589838 SEPT3Q9UH03 358 aa19.25■□□□□ 0.67
PRKCSH-209ENST00000589838 WASF2Q9Y6W5 498 aa19.25■□□□□ 0.67
PRKCSH-209ENST00000589838 RPP40O75818 363 aaKnown RBP19.24■□□□□ 0.67
PRKCSH-209ENST00000589838 GNA12Q03113 381 aa19.24■□□□□ 0.67
PRKCSH-209ENST00000589838 SH2D4BQ5SQS7 431 aa19.24■□□□□ 0.67
PRKCSH-209ENST00000589838 SDCCAG8Q86SQ7 713 aaPredicted RBP19.24■□□□□ 0.67
PRKCSH-209ENST00000589838 KYQ8NBH2 561 aa19.24■□□□□ 0.67
PRKCSH-209ENST00000589838 SLAIN1Q8ND83 568 aa19.24■□□□□ 0.67
PRKCSH-209ENST00000589838 CEP70Q8NHQ1 597 aa19.24■□□□□ 0.67
PRKCSH-209ENST00000589838 TRMOQ9BU70 441 aa19.24■□□□□ 0.67
PRKCSH-209ENST00000589838 NACA2Q9H009 215 aa19.24■□□□□ 0.67
PRKCSH-209ENST00000589838 GTSE1Q9NYZ3 720 aa19.24■□□□□ 0.67
PRKCSH-209ENST00000589838 TTC24A2A3L6 582 aaPredicted RBP19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms