RNA–Protein interactions for RNA: ENST00000589709.1

VAT1-206, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-206ENST00000589709 LRRC61Q9BV99 259 aa12.32□□□□□ -0.44
VAT1-206ENST00000589709 ISCUQ9H1K1 167 aa12.32□□□□□ -0.44
VAT1-206ENST00000589709 TCEAL2Q9H3H9 227 aaPredicted RBP12.32□□□□□ -0.44
VAT1-206ENST00000589709 ATP13A3Q9H7F0 1226 aa12.32□□□□□ -0.44
VAT1-206ENST00000589709 MRPL47Q9HD33 250 aaKnown RBP12.32□□□□□ -0.44
VAT1-206ENST00000589709 CNOT8Q9UFF9 292 aaKnown RBP12.32□□□□□ -0.44
VAT1-206ENST00000589709 PNMA8BQ9ULN7 279 aaPredicted RBP12.32□□□□□ -0.44
VAT1-206ENST00000589709 ATP8A1Q9Y2Q0 1164 aa12.32□□□□□ -0.44
VAT1-206ENST00000589709 PCDHB1Q9Y5F3 818 aa12.32□□□□□ -0.44
VAT1-206ENST00000589709 SCINQ9Y6U3 715 aa12.32□□□□□ -0.44
VAT1-206ENST00000589709 CPED1A4D0V7 1026 aa12.31□□□□□ -0.44
VAT1-206ENST00000589709 YY2O15391 372 aa12.31□□□□□ -0.44
VAT1-206ENST00000589709 ATMINO43313 823 aaPredicted RBP12.31□□□□□ -0.44
VAT1-206ENST00000589709 LRCH4O75427 683 aa12.31□□□□□ -0.44
VAT1-206ENST00000589709 ANXA6P08133 673 aa12.31□□□□□ -0.44
VAT1-206ENST00000589709 C6P13671 934 aa12.31□□□□□ -0.44
VAT1-206ENST00000589709 TSHRP16473 764 aa12.31□□□□□ -0.44
VAT1-206ENST00000589709 HTR1BP28222 390 aa12.31□□□□□ -0.44
VAT1-206ENST00000589709 SERPINA4P29622 427 aa12.31□□□□□ -0.44
VAT1-206ENST00000589709 MMP12P39900 470 aa12.31□□□□□ -0.44
VAT1-206ENST00000589709 RGRP47804 291 aa12.31□□□□□ -0.44
VAT1-206ENST00000589709 LIG3P49916 1009 aa12.31□□□□□ -0.44
VAT1-206ENST00000589709 POLR2LP62875 67 aaKnown RBP12.31□□□□□ -0.44
VAT1-206ENST00000589709 KLHL30Q0D2K2 578 aa12.31□□□□□ -0.44
VAT1-206ENST00000589709 C1orf61Q13536 156 aa12.31□□□□□ -0.44
VAT1-206ENST00000589709 DPYSQ14117 519 aa12.31□□□□□ -0.44
VAT1-206ENST00000589709 CDKN3Q16667 212 aa12.31□□□□□ -0.44
VAT1-206ENST00000589709 ISXQ2M1V0 245 aa12.31□□□□□ -0.44
VAT1-206ENST00000589709 BOLA3Q53S33 107 aa12.31□□□□□ -0.44
VAT1-206ENST00000589709 PPP6R3Q5H9R7 873 aaPredicted RBP12.31□□□□□ -0.44
VAT1-206ENST00000589709 C6orf132Q5T0Z8 1188 aa12.31□□□□□ -0.44
VAT1-206ENST00000589709 CFAP58Q5T655 872 aa12.31□□□□□ -0.44
VAT1-206ENST00000589709 GUSBP11Q6P575 273 aa12.31□□□□□ -0.44
VAT1-206ENST00000589709 IGF2-ASQ6U949 168 aa12.31□□□□□ -0.44
VAT1-206ENST00000589709 ZSWIM9Q86XI8 627 aa12.31□□□□□ -0.44
VAT1-206ENST00000589709 SLC35F3Q8IY50 421 aa12.31□□□□□ -0.44
VAT1-206ENST00000589709 ATL2Q8NHH9 583 aa12.31□□□□□ -0.44
VAT1-206ENST00000589709 WDR48Q8TAF3 677 aa12.31□□□□□ -0.44
VAT1-206ENST00000589709 ZNF599Q96NL3 588 aa12.31□□□□□ -0.44
VAT1-206ENST00000589709 PSKH2Q96QS6 385 aa12.31□□□□□ -0.44
VAT1-206ENST00000589709 APOOQ9BUR5 198 aa12.31□□□□□ -0.44
VAT1-206ENST00000589709 TRIM7Q9C029 511 aa12.31□□□□□ -0.44
VAT1-206ENST00000589709 CLPBQ9H078 707 aa12.31□□□□□ -0.44
VAT1-206ENST00000589709 PRORYQ9H606 182 aa12.31□□□□□ -0.44
VAT1-206ENST00000589709 POLR1BQ9H9Y6 1135 aa12.31□□□□□ -0.44
VAT1-206ENST00000589709 CWC15Q9P013 229 aaKnown RBP12.31□□□□□ -0.44
VAT1-206ENST00000589709 BAHCC1Q9P281 2608 aa12.3□□□□□ -0.44
VAT1-206ENST00000589709 PTPRQQ9UMZ3 2332 aa12.3□□□□□ -0.44
VAT1-206ENST00000589709 USP12O75317 370 aa12.3□□□□□ -0.44
VAT1-206ENST00000589709 TCEA3O75764 348 aa12.3□□□□□ -0.44
VAT1-206ENST00000589709 RASGRP1O95267 797 aa12.3□□□□□ -0.44
VAT1-206ENST00000589709 ALPIP09923 528 aa12.3□□□□□ -0.44
VAT1-206ENST00000589709 TGM2P21980 687 aa12.3□□□□□ -0.44
VAT1-206ENST00000589709 RENBPP51606 427 aa12.3□□□□□ -0.44
VAT1-206ENST00000589709 HK3P52790 923 aa12.3□□□□□ -0.44
VAT1-206ENST00000589709 ERVPABLB-1P60509 514 aa12.3□□□□□ -0.44
VAT1-206ENST00000589709 AP1S1P61966 158 aa12.3□□□□□ -0.44
VAT1-206ENST00000589709 MTM1Q13496 603 aa12.3□□□□□ -0.44
VAT1-206ENST00000589709 INPP5AQ14642 412 aa12.3□□□□□ -0.44
VAT1-206ENST00000589709 NFATC4Q14934 902 aa12.3□□□□□ -0.44
VAT1-206ENST00000589709 IQCB1Q15051 598 aa12.3□□□□□ -0.44
VAT1-206ENST00000589709 ELOCQ15369 112 aa12.3□□□□□ -0.44
VAT1-206ENST00000589709 DPYSL2Q16555 572 aa12.3□□□□□ -0.44
VAT1-206ENST00000589709 ALG11Q2TAA5 492 aa12.3□□□□□ -0.44
VAT1-206ENST00000589709 TMCO4Q5TGY1 634 aa12.3□□□□□ -0.44
VAT1-206ENST00000589709 ESRP1Q6NXG1 681 aaKnown RBP12.3□□□□□ -0.44
VAT1-206ENST00000589709 NPWQ8N729 165 aa12.3□□□□□ -0.44
VAT1-206ENST00000589709 ZNF248Q8NDW4 579 aa12.3□□□□□ -0.44
VAT1-206ENST00000589709 SCG3Q8WXD2 468 aaKnown RBP12.3□□□□□ -0.44
VAT1-206ENST00000589709 ZNF653Q96CK0 615 aa12.3□□□□□ -0.44
VAT1-206ENST00000589709 CRELD1Q96HD1 420 aa12.3□□□□□ -0.44
VAT1-206ENST00000589709 HIC2Q96JB3 615 aa12.3□□□□□ -0.44
VAT1-206ENST00000589709 BBC3Q96PG8 261 aaPredicted RBP12.3□□□□□ -0.44
VAT1-206ENST00000589709 UBL7Q96S82 380 aaPredicted RBP12.3□□□□□ -0.44
VAT1-206ENST00000589709 CINPQ9BW66 212 aaPredicted RBP12.3□□□□□ -0.44
VAT1-206ENST00000589709 ZWILCHQ9H900 591 aa12.3□□□□□ -0.44
VAT1-206ENST00000589709 SP110Q9HB58 689 aa12.3□□□□□ -0.44
VAT1-206ENST00000589709 SEPT3Q9UH03 358 aa12.3□□□□□ -0.44
VAT1-206ENST00000589709 COQ6Q9Y2Z9 468 aa12.3□□□□□ -0.44
VAT1-206ENST00000589709 BZW2Q9Y6E2 419 aaKnown RBP12.3□□□□□ -0.44
VAT1-206ENST00000589709 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.29□□□□□ -0.44
VAT1-206ENST00000589709 A0A1W2PQ67 120 aa12.29□□□□□ -0.44
VAT1-206ENST00000589709 H3BRJ5 948 aa12.29□□□□□ -0.44
VAT1-206ENST00000589709 DFFAO00273 331 aa12.29□□□□□ -0.44
VAT1-206ENST00000589709 TRAFD1O14545 582 aaPredicted RBP12.29□□□□□ -0.44
VAT1-206ENST00000589709 MUSKO15146 869 aa12.29□□□□□ -0.44
VAT1-206ENST00000589709 MPOP05164 745 aa12.29□□□□□ -0.44
VAT1-206ENST00000589709 HOXC4P09017 264 aaPredicted RBP12.29□□□□□ -0.44
VAT1-206ENST00000589709 SKILP12757 684 aa12.29□□□□□ -0.44
VAT1-206ENST00000589709 HSPA9P38646 679 aaKnown RBP12.29□□□□□ -0.44
VAT1-206ENST00000589709 GABREP78334 506 aa12.29□□□□□ -0.44
VAT1-206ENST00000589709 TLE3Q04726 772 aa12.29□□□□□ -0.44
VAT1-206ENST00000589709 BCL2L1Q07817 233 aa12.29□□□□□ -0.44
VAT1-206ENST00000589709 RALGDSQ12967 914 aa12.29□□□□□ -0.44
VAT1-206ENST00000589709 ENPP7Q6UWV6 458 aa12.29□□□□□ -0.44
VAT1-206ENST00000589709 RBM44Q6ZP01 1051 aaKnown RBP12.29□□□□□ -0.44
VAT1-206ENST00000589709 HID1Q8IV36 788 aa12.29□□□□□ -0.44
VAT1-206ENST00000589709 SYN2Q92777 582 aaPredicted RBP12.29□□□□□ -0.44
VAT1-206ENST00000589709 WDR92Q96MX6 357 aa12.29□□□□□ -0.44
VAT1-206ENST00000589709 FUCA2Q9BTY2 467 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms