RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 CHRNA4P43681 627 aa10.45□□□□□ -0.74
VPS25-203ENST00000589520 SCNN1BP51168 640 aa10.45□□□□□ -0.74
VPS25-203ENST00000589520 RPL26P61254 145 aaKnown RBP10.45□□□□□ -0.74
VPS25-203ENST00000589520 NAA20P61599 178 aa10.45□□□□□ -0.74
VPS25-203ENST00000589520 AP1S1P61966 158 aa10.45□□□□□ -0.74
VPS25-203ENST00000589520 OVGP1Q12889 678 aa10.45□□□□□ -0.74
VPS25-203ENST00000589520 CTBP1Q13363 440 aa10.45□□□□□ -0.74
VPS25-203ENST00000589520 LIPMQ5VYY2 423 aa10.45□□□□□ -0.74
VPS25-203ENST00000589520 METTL21CQ5VZV1 264 aa10.45□□□□□ -0.74
VPS25-203ENST00000589520 CXorf57Q6NSI4 855 aaKnown RBP10.45□□□□□ -0.74
VPS25-203ENST00000589520 CHRDL2Q6WN34 429 aa10.45□□□□□ -0.74
VPS25-203ENST00000589520 TMC7Q7Z402 723 aa10.45□□□□□ -0.74
VPS25-203ENST00000589520 KDELC2Q7Z4H8 507 aa10.45□□□□□ -0.74
VPS25-203ENST00000589520 CLNKQ7Z7G1 428 aa10.45□□□□□ -0.74
VPS25-203ENST00000589520 CMC1Q7Z7K0 106 aa10.45□□□□□ -0.74
VPS25-203ENST00000589520 ARID3BQ8IVW6 561 aaPredicted RBP10.45□□□□□ -0.74
VPS25-203ENST00000589520 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.45□□□□□ -0.74
VPS25-203ENST00000589520 ARL14EPQ8N8R7 260 aaPredicted RBP10.45□□□□□ -0.74
VPS25-203ENST00000589520 KREMEN2Q8NCW0 462 aa10.45□□□□□ -0.74
VPS25-203ENST00000589520 OR13J1Q8NGT2 312 aa10.45□□□□□ -0.74
VPS25-203ENST00000589520 OR6P1Q8NGX9 317 aa10.45□□□□□ -0.74
VPS25-203ENST00000589520 RFWD2Q8NHY2 731 aa10.45□□□□□ -0.74
VPS25-203ENST00000589520 SP7Q8TDD2 431 aaPredicted RBP10.45□□□□□ -0.74
VPS25-203ENST00000589520 SKA1Q96BD8 255 aa10.45□□□□□ -0.74
VPS25-203ENST00000589520 MYEOVQ96EZ4 313 aa10.45□□□□□ -0.74
VPS25-203ENST00000589520 ELMO2Q96JJ3 720 aa10.45□□□□□ -0.74
VPS25-203ENST00000589520 FEM1AQ9BSK4 669 aa10.45□□□□□ -0.74
VPS25-203ENST00000589520 MECRQ9BV79 373 aa10.45□□□□□ -0.74
VPS25-203ENST00000589520 MTIF3Q9H2K0 278 aaKnown RBP10.45□□□□□ -0.74
VPS25-203ENST00000589520 MRPL46Q9H2W6 279 aaKnown RBP10.45□□□□□ -0.74
VPS25-203ENST00000589520 KLC4Q9NSK0 619 aa10.45□□□□□ -0.74
VPS25-203ENST00000589520 MRGBPQ9NV56 204 aa10.45□□□□□ -0.74
VPS25-203ENST00000589520 NLE1Q9NVX2 485 aaPredicted RBP10.45□□□□□ -0.74
VPS25-203ENST00000589520 DNAJC28Q9NX36 388 aa10.45□□□□□ -0.74
VPS25-203ENST00000589520 KIAA1522Q9P206 1035 aaPredicted RBP10.45□□□□□ -0.74
VPS25-203ENST00000589520 SLC2A6Q9UGQ3 507 aa10.45□□□□□ -0.74
VPS25-203ENST00000589520 RAPGEFL1Q9UHV5 662 aa10.45□□□□□ -0.74
VPS25-203ENST00000589520 CPQQ9Y646 472 aa10.45□□□□□ -0.74
VPS25-203ENST00000589520 SPTBN5Q9NRC6 3674 aaKnown RBP10.45□□□□□ -0.74
VPS25-203ENST00000589520 COL4A6Q14031 1691 aa10.44□□□□□ -0.74
VPS25-203ENST00000589520 ZBBXA8MT70 800 aa10.44□□□□□ -0.74
VPS25-203ENST00000589520 F8W8V4 182 aa10.44□□□□□ -0.74
VPS25-203ENST00000589520 GOLGA8TH3BQL2 631 aa10.44□□□□□ -0.74
VPS25-203ENST00000589520 CBX4O00257 560 aa10.44□□□□□ -0.74
VPS25-203ENST00000589520 MUSKO15146 869 aa10.44□□□□□ -0.74
VPS25-203ENST00000589520 MGRN1O60291 552 aa10.44□□□□□ -0.74
VPS25-203ENST00000589520 NPHS1O60500 1241 aa10.44□□□□□ -0.74
VPS25-203ENST00000589520 GREM1O60565 184 aa10.44□□□□□ -0.74
VPS25-203ENST00000589520 S1PR4O95977 384 aa10.44□□□□□ -0.74
VPS25-203ENST00000589520 GLUD1P00367 558 aa10.44□□□□□ -0.74
VPS25-203ENST00000589520 CYBBP04839 570 aa10.44□□□□□ -0.74
VPS25-203ENST00000589520 C8AP07357 584 aa10.44□□□□□ -0.74
VPS25-203ENST00000589520 POU2F2P09086 479 aa10.44□□□□□ -0.74
VPS25-203ENST00000589520 LTA4HP09960 611 aaKnown RBP10.44□□□□□ -0.74
VPS25-203ENST00000589520 SLC35E2BP0CK96 405 aa10.44□□□□□ -0.74
VPS25-203ENST00000589520 ACRP10323 421 aa10.44□□□□□ -0.74
VPS25-203ENST00000589520 IRF1P10914 325 aa10.44□□□□□ -0.74
VPS25-203ENST00000589520 CD9P21926 228 aa10.44□□□□□ -0.74
VPS25-203ENST00000589520 BMPR1AP36894 532 aa10.44□□□□□ -0.74
VPS25-203ENST00000589520 PPARGP37231 505 aaPredicted RBP10.44□□□□□ -0.74
VPS25-203ENST00000589520 MNAT1P51948 309 aa10.44□□□□□ -0.74
VPS25-203ENST00000589520 PLK1P53350 603 aa10.44□□□□□ -0.74
VPS25-203ENST00000589520 DNAJB13P59910 316 aa10.44□□□□□ -0.74
VPS25-203ENST00000589520 IRX4P78413 519 aa10.44□□□□□ -0.74
VPS25-203ENST00000589520 MPP1Q00013 466 aa10.44□□□□□ -0.74
VPS25-203ENST00000589520 FPGSQ05932 587 aa10.44□□□□□ -0.74
VPS25-203ENST00000589520 SF3A3Q12874 501 aaKnown RBP eCLIP10.44□□□□□ -0.747e-86■■■■■ 64.7
VPS25-203ENST00000589520 CDH18Q13634 790 aa10.44□□□□□ -0.74
VPS25-203ENST00000589520 ITGA9Q13797 1035 aa10.44□□□□□ -0.74
VPS25-203ENST00000589520 ACAP2Q15057 778 aa10.44□□□□□ -0.74
VPS25-203ENST00000589520 LRRC8EQ6NSJ5 796 aa10.44□□□□□ -0.74
VPS25-203ENST00000589520 NCEH1Q6PIU2 408 aa10.44□□□□□ -0.74
VPS25-203ENST00000589520 ELMSAN1Q6PJG2 1045 aa10.44□□□□□ -0.74
VPS25-203ENST00000589520 SLC22A9Q8IVM8 553 aa10.44□□□□□ -0.74
VPS25-203ENST00000589520 DENND6AQ8IWF6 608 aa10.44□□□□□ -0.74
VPS25-203ENST00000589520 PLD6Q8N2A8 252 aaKnown RBP10.44□□□□□ -0.74
VPS25-203ENST00000589520 CARNMT1Q8N4J0 409 aa10.44□□□□□ -0.74
VPS25-203ENST00000589520 KIAA1958Q8N8K9 716 aa10.44□□□□□ -0.74
VPS25-203ENST00000589520 GPATCH11Q8N954 259 aa10.44□□□□□ -0.74
VPS25-203ENST00000589520 KLHL23Q8NBE8 558 aa10.44□□□□□ -0.74
VPS25-203ENST00000589520 OR4L1Q8NH43 312 aa10.44□□□□□ -0.74
VPS25-203ENST00000589520 MAGEC3Q8TD91 643 aa10.44□□□□□ -0.74
VPS25-203ENST00000589520 HDAC10Q969S8 669 aa10.44□□□□□ -0.74
VPS25-203ENST00000589520 RMDN1Q96DB5 314 aa10.44□□□□□ -0.74
VPS25-203ENST00000589520 ATXN7L3BQ96GX2 97 aa10.44□□□□□ -0.74
VPS25-203ENST00000589520 SCYL1Q96KG9 808 aa10.44□□□□□ -0.74
VPS25-203ENST00000589520 OMDQ99983 421 aa10.44□□□□□ -0.74
VPS25-203ENST00000589520 TDRD1Q9BXT4 1180 aaKnown RBP10.44□□□□□ -0.74
VPS25-203ENST00000589520 LRRC3Q9BY71 257 aa10.44□□□□□ -0.74
VPS25-203ENST00000589520 DRC3Q9H069 523 aa10.44□□□□□ -0.74
VPS25-203ENST00000589520 ILKAPQ9H0C8 392 aaPredicted RBP10.44□□□□□ -0.74
VPS25-203ENST00000589520 CAB39LQ9H9S4 337 aa10.44□□□□□ -0.74
VPS25-203ENST00000589520 NOD2Q9HC29 1040 aa10.44□□□□□ -0.74
VPS25-203ENST00000589520 SYTL2Q9HCH5 934 aa10.44□□□□□ -0.74
VPS25-203ENST00000589520 ZNF334Q9HCZ1 680 aaPredicted RBP10.44□□□□□ -0.74
VPS25-203ENST00000589520 ASAH2Q9NR71 780 aa10.44□□□□□ -0.74
VPS25-203ENST00000589520 DNMT3BQ9UBC3 853 aaKnown RBP10.44□□□□□ -0.74
VPS25-203ENST00000589520 VTI1BQ9UEU0 232 aa10.44□□□□□ -0.74
VPS25-203ENST00000589520 ARHGAP26Q9UNA1 814 aa10.44□□□□□ -0.74
VPS25-203ENST00000589520 DNAJC16Q9Y2G8 782 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms