RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	MSLN	Q13421	630 aa	Predicted RBP	15.53	■□□□□ 0.08
DDX39A-209	ENST00000589318	CNPY1	Q3B7I2	92 aa		15.53	■□□□□ 0.08
DDX39A-209	ENST00000589318	PRSS36	Q5K4E3	855 aa		15.53	■□□□□ 0.08
DDX39A-209	ENST00000589318	GPR158	Q5T848	1215 aa		15.53	■□□□□ 0.08
DDX39A-209	ENST00000589318	PDE12	Q6L8Q7	609 aa	Known RBP	15.53	■□□□□ 0.08
DDX39A-209	ENST00000589318	ZNF449	Q6P9G9	518 aa		15.53	■□□□□ 0.08
DDX39A-209	ENST00000589318	POTEH	Q6S545	545 aa		15.53	■□□□□ 0.08
DDX39A-209	ENST00000589318	ZNF783	Q6ZMS7	281 aa		15.53	■□□□□ 0.08
DDX39A-209	ENST00000589318	ARHGAP24	Q8N264	748 aa		15.53	■□□□□ 0.08
DDX39A-209	ENST00000589318	UCMA	Q8WVF2	138 aa		15.53	■□□□□ 0.08
DDX39A-209	ENST00000589318	ZNF669	Q96BR6	464 aa	Predicted RBP	15.53	■□□□□ 0.08
DDX39A-209	ENST00000589318	ZNF707	Q96C28	371 aa	Predicted RBP	15.53	■□□□□ 0.08
DDX39A-209	ENST00000589318	ALG14	Q96F25	216 aa		15.53	■□□□□ 0.08
DDX39A-209	ENST00000589318	CERS2	Q96G23	380 aa		15.53	■□□□□ 0.08
DDX39A-209	ENST00000589318	ZNF184	Q99676	751 aa	Predicted RBP	15.53	■□□□□ 0.08
DDX39A-209	ENST00000589318	MGME1	Q9BQP7	344 aa		15.53	■□□□□ 0.08
DDX39A-209	ENST00000589318	FSD1L	Q9BXM9	530 aa		15.53	■□□□□ 0.08
DDX39A-209	ENST00000589318	POLR1E	Q9GZS1	481 aa	Known RBP	15.53	■□□□□ 0.08
DDX39A-209	ENST00000589318	ANGPTL2	Q9UKU9	493 aa		15.53	■□□□□ 0.08
DDX39A-209	ENST00000589318	HCFC2	Q9Y5Z7	792 aa		15.53	■□□□□ 0.08
DDX39A-209	ENST00000589318	MYOF	Q9NZM1	2061 aa		15.53	■□□□□ 0.08
DDX39A-209	ENST00000589318	IQANK1	A0A1B0GTG1	560 aa		15.53	■□□□□ 0.08
DDX39A-209	ENST00000589318	MAGEB16	A2A368	324 aa		15.53	■□□□□ 0.08
DDX39A-209	ENST00000589318	FAM47DP	A6NHR8	397 aa		15.53	■□□□□ 0.08
DDX39A-209	ENST00000589318	EIF4E1B	A6NMX2	242 aa	Known RBP	15.53	■□□□□ 0.08
DDX39A-209	ENST00000589318	SPAG7	O75391	227 aa		15.53	■□□□□ 0.08
DDX39A-209	ENST00000589318	ZMPSTE24	O75844	475 aa		15.53	■□□□□ 0.08
DDX39A-209	ENST00000589318	TMCC1	O94876	653 aa		15.53	■□□□□ 0.08
DDX39A-209	ENST00000589318	FGF19	O95750	216 aa		15.53	■□□□□ 0.08
DDX39A-209	ENST00000589318	KRT4	P19013	534 aa		15.53	■□□□□ 0.08
DDX39A-209	ENST00000589318	NMBR	P28336	390 aa		15.53	■□□□□ 0.08
DDX39A-209	ENST00000589318	MZF1	P28698	734 aa	Predicted RBP	15.53	■□□□□ 0.08
DDX39A-209	ENST00000589318	NTHL1	P78549	312 aa		15.53	■□□□□ 0.08
DDX39A-209	ENST00000589318	ARF5	P84085	180 aa		15.53	■□□□□ 0.08
DDX39A-209	ENST00000589318	ZNF235	Q14590	738 aa		15.53	■□□□□ 0.08
DDX39A-209	ENST00000589318	PCSK7	Q16549	785 aa		15.53	■□□□□ 0.08
DDX39A-209	ENST00000589318	KDELC2	Q7Z4H8	507 aa		15.53	■□□□□ 0.08
DDX39A-209	ENST00000589318	CMTM8	Q8IZV2	173 aa		15.53	■□□□□ 0.08
DDX39A-209	ENST00000589318	CARNMT1	Q8N4J0	409 aa		15.53	■□□□□ 0.08
DDX39A-209	ENST00000589318	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	15.53	■□□□□ 0.08
DDX39A-209	ENST00000589318	TTC16	Q8NEE8	873 aa		15.53	■□□□□ 0.08
DDX39A-209	ENST00000589318	DENND1A	Q8TEH3	1009 aa		15.53	■□□□□ 0.08
DDX39A-209	ENST00000589318	SERAC1	Q96JX3	654 aa		15.53	■□□□□ 0.08
DDX39A-209	ENST00000589318	NSMCE3	Q96MG7	304 aa		15.53	■□□□□ 0.08
DDX39A-209	ENST00000589318	PSKH2	Q96QS6	385 aa		15.53	■□□□□ 0.08
DDX39A-209	ENST00000589318	SEMA3C	Q99985	751 aa		15.53	■□□□□ 0.08
DDX39A-209	ENST00000589318	SSU72	Q9NP77	194 aa	Known RBP	15.53	■□□□□ 0.08
DDX39A-209	ENST00000589318	UBA2	Q9UBT2	640 aa	Predicted RBP	15.53	■□□□□ 0.08
DDX39A-209	ENST00000589318	ZNF510	Q9Y2H8	683 aa		15.53	■□□□□ 0.08
DDX39A-209	ENST00000589318	IKBKG	Q9Y6K9	419 aa		15.53	■□□□□ 0.08
DDX39A-209	ENST00000589318		A0A1B0GVG6	124 aa		15.52	■□□□□ 0.07
DDX39A-209	ENST00000589318		H0Y626	953 aa		15.52	■□□□□ 0.07
DDX39A-209	ENST00000589318	T-ENOL	P0DO92	83 aa		15.52	■□□□□ 0.07
DDX39A-209	ENST00000589318	ERVK-10	P10266	1014 aa		15.52	■□□□□ 0.07
DDX39A-209	ENST00000589318	DDX6	P26196	483 aa	Known RBP eCLIP	15.52	■□□□□ 0.07
DDX39A-209	ENST00000589318	RGR	P47804	291 aa		15.52	■□□□□ 0.07
DDX39A-209	ENST00000589318	POU6F1	Q14863	301 aa		15.52	■□□□□ 0.07
DDX39A-209	ENST00000589318	ZNF697	Q5TEC3	545 aa		15.52	■□□□□ 0.07
DDX39A-209	ENST00000589318	TDRD5	Q8NAT2	981 aa	Known RBP	15.52	■□□□□ 0.07
DDX39A-209	ENST00000589318	GDAP1	Q8TB36	358 aa		15.52	■□□□□ 0.07
DDX39A-209	ENST00000589318	SH3RF2	Q8TEC5	729 aa		15.52	■□□□□ 0.07
DDX39A-209	ENST00000589318	STMN2	Q93045	179 aa		15.52	■□□□□ 0.07
DDX39A-209	ENST00000589318	SMC6	Q96SB8	1091 aa		15.52	■□□□□ 0.07
DDX39A-209	ENST00000589318	MUC3B	Q9H195	1237 aa		15.52	■□□□□ 0.07
DDX39A-209	ENST00000589318	TASP1	Q9H6P5	420 aa		15.52	■□□□□ 0.07
DDX39A-209	ENST00000589318	CERS4	Q9HA82	394 aa		15.52	■□□□□ 0.07
DDX39A-209	ENST00000589318	SEPT3	Q9UH03	358 aa		15.52	■□□□□ 0.07
DDX39A-209	ENST00000589318	BLOC1S6	Q9UL45	172 aa		15.52	■□□□□ 0.07
DDX39A-209	ENST00000589318	PSAT1	Q9Y617	370 aa		15.52	■□□□□ 0.07
DDX39A-209	ENST00000589318	ANKRD36	A6QL64	1941 aa		15.52	■□□□□ 0.07
DDX39A-209	ENST00000589318	LOC285095	A0A1B0GVY8	99 aa		15.51	■□□□□ 0.07
DDX39A-209	ENST00000589318		H0Y3Z8	333 aa		15.51	■□□□□ 0.07
DDX39A-209	ENST00000589318	CBX4	O00257	560 aa		15.51	■□□□□ 0.07
DDX39A-209	ENST00000589318	SNAP91	O60641	907 aa		15.51	■□□□□ 0.07
DDX39A-209	ENST00000589318	CR2	P20023	1033 aa		15.51	■□□□□ 0.07
DDX39A-209	ENST00000589318	TPP2	P29144	1249 aa	Predicted RBP	15.51	■□□□□ 0.07
DDX39A-209	ENST00000589318	NAB1	Q13506	487 aa		15.51	■□□□□ 0.07
DDX39A-209	ENST00000589318	RFTN1	Q14699	578 aa	Predicted RBP	15.51	■□□□□ 0.07
DDX39A-209	ENST00000589318	CYTH1	Q15438	398 aa		15.51	■□□□□ 0.07
DDX39A-209	ENST00000589318	SMAD1	Q15797	465 aa	Known RBP	15.51	■□□□□ 0.07
DDX39A-209	ENST00000589318	PCID2	Q5JVF3	399 aa		15.51	■□□□□ 0.07
DDX39A-209	ENST00000589318	PKN3	Q6P5Z2	889 aa		15.51	■□□□□ 0.07
DDX39A-209	ENST00000589318	RBM23	Q86U06	439 aa	Known RBP	15.51	■□□□□ 0.07
DDX39A-209	ENST00000589318	TTC8	Q8TAM2	541 aa		15.51	■□□□□ 0.07
DDX39A-209	ENST00000589318	USP13	Q92995	863 aa	Predicted RBP	15.51	■□□□□ 0.07
DDX39A-209	ENST00000589318	BHMT	Q93088	406 aa		15.51	■□□□□ 0.07
DDX39A-209	ENST00000589318	FEM1A	Q9BSK4	669 aa		15.51	■□□□□ 0.07
DDX39A-209	ENST00000589318	PRKD2	Q9BZL6	878 aa		15.51	■□□□□ 0.07
DDX39A-209	ENST00000589318	ZDHHC7	Q9NXF8	308 aa		15.51	■□□□□ 0.07
DDX39A-209	ENST00000589318	GALNT8	Q9NY28	637 aa		15.51	■□□□□ 0.07
DDX39A-209	ENST00000589318	CLEC4E	Q9ULY5	219 aa		15.51	■□□□□ 0.07
DDX39A-209	ENST00000589318	PHTF1	Q9UMS5	762 aa		15.51	■□□□□ 0.07
DDX39A-209	ENST00000589318	SMG5	Q9UPR3	1016 aa	Known RBP	15.51	■□□□□ 0.07
DDX39A-209	ENST00000589318	TCAF1	Q9Y4C2	921 aa		15.51	■□□□□ 0.07
DDX39A-209	ENST00000589318	C2orf16	Q68DN1	1984 aa		15.51	■□□□□ 0.07
DDX39A-209	ENST00000589318	E2F8	A0AVK6	867 aa		15.51	■□□□□ 0.07
DDX39A-209	ENST00000589318	TRIM49D1	C9J1S8	452 aa		15.51	■□□□□ 0.07
DDX39A-209	ENST00000589318	XYLB	O75191	536 aa		15.51	■□□□□ 0.07
DDX39A-209	ENST00000589318	ENTPD5	O75356	428 aa		15.51	■□□□□ 0.07
DDX39A-209	ENST00000589318	PSMG1	O95456	288 aa		15.51	■□□□□ 0.07

Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms