RNA–Protein interactions for RNA: ENST00000589006.1

SAFB-206, Transcript of scaffold attachment factor B, humanhuman

TSL 5

Gene SAFB, Length 459 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB-206ENST00000589006 HOMER3Q9NSC5 361 aa19.91■□□□□ 0.78
SAFB-206ENST00000589006 KLHL8Q9P2G9 620 aaPredicted RBP19.91■□□□□ 0.78
SAFB-206ENST00000589006 DRG1Q9Y295 367 aaKnown RBP19.91■□□□□ 0.78
SAFB-206ENST00000589006 RAI2Q9Y5P3 530 aa19.91■□□□□ 0.78
SAFB-206ENST00000589006 FADS3Q9Y5Q0 445 aa19.91■□□□□ 0.78
SAFB-206ENST00000589006 SAR1BQ9Y6B6 198 aa19.91■□□□□ 0.78
SAFB-206ENST00000589006 LRRC72A6NJI9 287 aa19.9■□□□□ 0.78
SAFB-206ENST00000589006 METTL12A8MUP2 240 aa19.9■□□□□ 0.78
SAFB-206ENST00000589006 PGRMC1O00264 195 aaKnown RBP19.9■□□□□ 0.78
SAFB-206ENST00000589006 AREL1O15033 823 aa19.9■□□□□ 0.78
SAFB-206ENST00000589006 SPINT1O43278 529 aa19.9■□□□□ 0.78
SAFB-206ENST00000589006 STK10O94804 968 aaKnown RBP19.9■□□□□ 0.78
SAFB-206ENST00000589006 ITGAVP06756 1048 aa19.9■□□□□ 0.78
SAFB-206ENST00000589006 NFKB1P19838 968 aa19.9■□□□□ 0.78
SAFB-206ENST00000589006 CD86P42081 329 aa19.9■□□□□ 0.78
SAFB-206ENST00000589006 ABL2P42684 1182 aa19.9■□□□□ 0.78
SAFB-206ENST00000589006 POLR2LP62875 67 aaKnown RBP19.9■□□□□ 0.78
SAFB-206ENST00000589006 SHC2P98077 582 aa19.9■□□□□ 0.78
SAFB-206ENST00000589006 ELF2Q15723 593 aa19.9■□□□□ 0.78
SAFB-206ENST00000589006 NEK5Q6P3R8 708 aa19.9■□□□□ 0.78
SAFB-206ENST00000589006 TTC7BQ86TV6 843 aa19.9■□□□□ 0.78
SAFB-206ENST00000589006 SLC41A1Q8IVJ1 513 aa19.9■□□□□ 0.78
SAFB-206ENST00000589006 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.9■□□□□ 0.78
SAFB-206ENST00000589006 FAM71DQ8N9W8 422 aa19.9■□□□□ 0.78
SAFB-206ENST00000589006 SPATA13Q96N96 652 aa19.9■□□□□ 0.78
SAFB-206ENST00000589006 FCRL5Q96RD9 977 aa19.9■□□□□ 0.78
SAFB-206ENST00000589006 PREBQ9HCU5 417 aa19.9■□□□□ 0.78
SAFB-206ENST00000589006 ANKRD11Q6UB99 2663 aaPredicted RBP19.9■□□□□ 0.78
SAFB-206ENST00000589006 UPK3BL1B0FP48 263 aa19.89■□□□□ 0.77
SAFB-206ENST00000589006 UPK3BL2E5RIL1 263 aa19.89■□□□□ 0.77
SAFB-206ENST00000589006 OPHN1O60890 802 aa19.89■□□□□ 0.77
SAFB-206ENST00000589006 GCATO75600 419 aa19.89■□□□□ 0.77
SAFB-206ENST00000589006 PGLSO95336 258 aa19.89■□□□□ 0.77
SAFB-206ENST00000589006 PRLP01236 227 aa19.89■□□□□ 0.77
SAFB-206ENST00000589006 LAMA1P25391 3075 aa19.89■□□□□ 0.77
SAFB-206ENST00000589006 FASNP49327 2511 aaKnown RBP19.89■□□□□ 0.77
SAFB-206ENST00000589006 GDF10P55107 478 aa19.89■□□□□ 0.77
SAFB-206ENST00000589006 SNX1Q13596 522 aa19.89■□□□□ 0.77
SAFB-206ENST00000589006 CFAP58Q5T655 872 aa19.89■□□□□ 0.77
SAFB-206ENST00000589006 ARMC12Q5T9G4 340 aa19.89■□□□□ 0.77
SAFB-206ENST00000589006 SYT10Q6XYQ8 523 aa19.89■□□□□ 0.77
SAFB-206ENST00000589006 SDK1Q7Z5N4 2213 aa19.89■□□□□ 0.77
SAFB-206ENST00000589006 CREG2Q8IUH2 290 aa19.89■□□□□ 0.77
SAFB-206ENST00000589006 DEFB119Q8N690 84 aa19.89■□□□□ 0.77
SAFB-206ENST00000589006 PIH1D2Q8WWB5 315 aa19.89■□□□□ 0.77
SAFB-206ENST00000589006 FOXJ1Q92949 421 aa19.89■□□□□ 0.77
SAFB-206ENST00000589006 LOXL4Q96JB6 756 aa19.89■□□□□ 0.77
SAFB-206ENST00000589006 RBM15Q96T37 977 aaKnown RBP eCLIP19.89■□□□□ 0.772e-7■■□□□ 13.9
SAFB-206ENST00000589006 TDRD1Q9BXT4 1180 aaKnown RBP19.89■□□□□ 0.77
SAFB-206ENST00000589006 GBA3Q9H227 469 aa19.89■□□□□ 0.77
SAFB-206ENST00000589006 ZNF148Q9UQR1 794 aa19.89■□□□□ 0.77
SAFB-206ENST00000589006 PPIL1Q9Y3C6 166 aa19.89■□□□□ 0.77
SAFB-206ENST00000589006 TBC1D3DA0A087WVF3 549 aa19.88■□□□□ 0.77
SAFB-206ENST00000589006 TBC1D3IA0A087WXS9 549 aa19.88■□□□□ 0.77
SAFB-206ENST00000589006 TBC1D3EA0A087X179 549 aa19.88■□□□□ 0.77
SAFB-206ENST00000589006 TBC1D3KA0A087X1G2 549 aa19.88■□□□□ 0.77
SAFB-206ENST00000589006 TBC1D3FA6NER0 549 aaPredicted RBP19.88■□□□□ 0.77
SAFB-206ENST00000589006 TBC1D3LB9A6J9 549 aa19.88■□□□□ 0.77
SAFB-206ENST00000589006 PDHA1P08559 390 aa19.88■□□□□ 0.77
SAFB-206ENST00000589006 TBC1D3HP0C7X1 549 aa19.88■□□□□ 0.77
SAFB-206ENST00000589006 CASQ1P31415 396 aa19.88■□□□□ 0.77
SAFB-206ENST00000589006 CCR5P51681 352 aa19.88■□□□□ 0.77
SAFB-206ENST00000589006 CYP1B1Q16678 543 aa19.88■□□□□ 0.77
SAFB-206ENST00000589006 KIAA0895LQ68EN5 471 aa19.88■□□□□ 0.77
SAFB-206ENST00000589006 TBC1D3GQ6DHY5 549 aa19.88■□□□□ 0.77
SAFB-206ENST00000589006 ITPRIPL1Q6GPH6 555 aa19.88■□□□□ 0.77
SAFB-206ENST00000589006 TBC1D3CQ6IPX1 549 aa19.88■□□□□ 0.77
SAFB-206ENST00000589006 TRIM69Q86WT6 500 aa19.88■□□□□ 0.77
SAFB-206ENST00000589006 TBC1D3Q8IZP1 549 aaPredicted RBP19.88■□□□□ 0.77
SAFB-206ENST00000589006 C12orf50Q8NA57 414 aaPredicted RBP19.88■□□□□ 0.77
SAFB-206ENST00000589006 SPATA22Q8NHS9 363 aa19.88■□□□□ 0.77
SAFB-206ENST00000589006 CCDC110Q8TBZ0 833 aa19.88■□□□□ 0.77
SAFB-206ENST00000589006 VPS45Q9NRW7 570 aa19.88■□□□□ 0.77
SAFB-206ENST00000589006 SMARCAL1Q9NZC9 954 aa19.88■□□□□ 0.77
SAFB-206ENST00000589006 RSPH14Q9UHP6 348 aa19.88■□□□□ 0.77
SAFB-206ENST00000589006 TPX2Q9ULW0 747 aaKnown RBP19.88■□□□□ 0.77
SAFB-206ENST00000589006 PHTF1Q9UMS5 762 aa19.88■□□□□ 0.77
SAFB-206ENST00000589006 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.88■□□□□ 0.77
SAFB-206ENST00000589006 PCDHB9Q9Y5E1 797 aa19.88■□□□□ 0.77
SAFB-206ENST00000589006 DOCK9Q9BZ29 2069 aa19.87■□□□□ 0.77
SAFB-206ENST00000589006 RIOK3O14730 519 aaKnown RBP19.87■□□□□ 0.77
SAFB-206ENST00000589006 TSPAN6O43657 245 aa19.87■□□□□ 0.77
SAFB-206ENST00000589006 MT-CYBP00156 380 aaPredicted RBP19.87■□□□□ 0.77
SAFB-206ENST00000589006 CPP00450 1065 aa19.87■□□□□ 0.77
SAFB-206ENST00000589006 IGHV4-34P06331 123 aa19.87■□□□□ 0.77
SAFB-206ENST00000589006 ITIH2P19823 946 aa19.87■□□□□ 0.77
SAFB-206ENST00000589006 CA4P22748 312 aa19.87■□□□□ 0.77
SAFB-206ENST00000589006 PTGER3P43115 390 aa19.87■□□□□ 0.77
SAFB-206ENST00000589006 RPL26P61254 145 aaKnown RBP19.87■□□□□ 0.77
SAFB-206ENST00000589006 ELP6Q0PNE2 266 aa19.87■□□□□ 0.77
SAFB-206ENST00000589006 TMEM52BQ4KMG9 183 aa19.87■□□□□ 0.77
SAFB-206ENST00000589006 KDELC1Q6UW63 502 aa19.87■□□□□ 0.77
SAFB-206ENST00000589006 PDCD6IPQ8WUM4 868 aaKnown RBP19.87■□□□□ 0.77
SAFB-206ENST00000589006 DNASE2BQ8WZ79 361 aa19.87■□□□□ 0.77
SAFB-206ENST00000589006 HSPA12BQ96MM6 686 aa19.87■□□□□ 0.77
SAFB-206ENST00000589006 TRIB3Q96RU7 358 aa19.87■□□□□ 0.77
SAFB-206ENST00000589006 GORASP1Q9BQQ3 440 aa19.87■□□□□ 0.77
SAFB-206ENST00000589006 AP1M1Q9BXS5 423 aa19.87■□□□□ 0.77
SAFB-206ENST00000589006 PCDH9Q9HC56 1237 aa19.87■□□□□ 0.77
SAFB-206ENST00000589006 PCDH12Q9NPG4 1184 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms