RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 CPEB1Q9BZB8 566 aaKnown RBP22.42■■□□□ 1.18
ATG4D-209ENST00000588857 ZDHHC6Q9H6R6 413 aa22.42■■□□□ 1.18
ATG4D-209ENST00000588857 PPANQ9NQ55 473 aaKnown RBP22.42■■□□□ 1.18
ATG4D-209ENST00000588857 FAM169AQ9Y6X4 670 aa22.42■■□□□ 1.18
ATG4D-209ENST00000588857 ALDH1A2O94788 518 aa22.41■■□□□ 1.18
ATG4D-209ENST00000588857 PGLSO95336 258 aa22.41■■□□□ 1.18
ATG4D-209ENST00000588857 PRKCHP24723 683 aa22.41■■□□□ 1.18
ATG4D-209ENST00000588857 SOX9P48436 509 aa22.41■■□□□ 1.18
ATG4D-209ENST00000588857 KBTBD12Q3ZCT8 623 aa22.41■■□□□ 1.18
ATG4D-209ENST00000588857 NLRP9Q7RTR0 991 aa22.41■■□□□ 1.18
ATG4D-209ENST00000588857 SLC44A3Q8N4M1 653 aa22.41■■□□□ 1.18
ATG4D-209ENST00000588857 OR2A12Q8NGT7 310 aa22.41■■□□□ 1.18
ATG4D-209ENST00000588857 CHFRQ96EP1 664 aa22.41■■□□□ 1.18
ATG4D-209ENST00000588857 MFSD3Q96ES6 412 aa22.41■■□□□ 1.18
ATG4D-209ENST00000588857 FCRL3Q96P31 734 aaPredicted RBP22.41■■□□□ 1.18
ATG4D-209ENST00000588857 TMBIM4Q9HC24 238 aa22.41■■□□□ 1.18
ATG4D-209ENST00000588857 MOCS1Q9NZB8 636 aa22.41■■□□□ 1.18
ATG4D-209ENST00000588857 FETUBQ9UGM5 382 aa22.41■■□□□ 1.18
ATG4D-209ENST00000588857 CCDC78A2IDD5 438 aa22.4■■□□□ 1.18
ATG4D-209ENST00000588857 ANKRD66B4E2M5 251 aa22.4■■□□□ 1.18
ATG4D-209ENST00000588857 GOLGA8KD6RF30 607 aa22.4■■□□□ 1.18
ATG4D-209ENST00000588857 FZD6O60353 706 aa22.4■■□□□ 1.18
ATG4D-209ENST00000588857 CDH16O75309 829 aa22.4■■□□□ 1.18
ATG4D-209ENST00000588857 NMBRP28336 390 aa22.4■■□□□ 1.18
ATG4D-209ENST00000588857 RPL26P61254 145 aaKnown RBP22.4■■□□□ 1.18
ATG4D-209ENST00000588857 MSLNQ13421 630 aaPredicted RBP22.4■■□□□ 1.18
ATG4D-209ENST00000588857 TRMT10BQ6PF06 316 aaKnown RBP22.4■■□□□ 1.18
ATG4D-209ENST00000588857 SUGP1Q8IWZ8 645 aaKnown RBP22.4■■□□□ 1.18
ATG4D-209ENST00000588857 BRSK1Q8TDC3 778 aa22.4■■□□□ 1.18
ATG4D-209ENST00000588857 P2RY13Q9BPV8 354 aa22.4■■□□□ 1.18
ATG4D-209ENST00000588857 VPS18Q9P253 973 aa22.4■■□□□ 1.18
ATG4D-209ENST00000588857 BCCIPQ9P287 314 aaKnown RBP eCLIP22.4■■□□□ 1.18
ATG4D-209ENST00000588857 SLC24A2Q9UI40 661 aa22.4■■□□□ 1.18
ATG4D-209ENST00000588857 RPL26L1Q9UNX3 145 aaKnown RBP22.4■■□□□ 1.18
ATG4D-209ENST00000588857 IKBKGQ9Y6K9 419 aa22.4■■□□□ 1.18
ATG4D-209ENST00000588857 MUC22E2RYF6 1773 aaPredicted RBP22.39■■□□□ 1.18
ATG4D-209ENST00000588857 WASH3PC4AMC7 463 aa22.39■■□□□ 1.18
ATG4D-209ENST00000588857 TRAFD1O14545 582 aaPredicted RBP22.39■■□□□ 1.18
ATG4D-209ENST00000588857 RGS16O15492 202 aaPredicted RBP22.39■■□□□ 1.18
ATG4D-209ENST00000588857 HTRA2O43464 458 aaPredicted RBP22.39■■□□□ 1.18
ATG4D-209ENST00000588857 MSH2P43246 934 aa22.39■■□□□ 1.18
ATG4D-209ENST00000588857 GRIA4P48058 902 aa22.39■■□□□ 1.18
ATG4D-209ENST00000588857 FRG1Q14331 258 aaKnown RBP22.39■■□□□ 1.18
ATG4D-209ENST00000588857 EFTUD2Q15029 972 aaKnown RBP eCLIP22.39■■□□□ 1.183e-7■■□□□ 12.2
ATG4D-209ENST00000588857 QPCTQ16769 361 aa22.39■■□□□ 1.18
ATG4D-209ENST00000588857 SFTPA1Q8IWL2 248 aa22.39■■□□□ 1.18
ATG4D-209ENST00000588857 CTAGE3PQ8IX95 158 aa22.39■■□□□ 1.18
ATG4D-209ENST00000588857 CDKL2Q92772 493 aa22.39■■□□□ 1.18
ATG4D-209ENST00000588857 MRRFQ96E11 262 aaKnown RBP22.39■■□□□ 1.18
ATG4D-209ENST00000588857 CERS2Q96G23 380 aa22.39■■□□□ 1.18
ATG4D-209ENST00000588857 ZNF641Q96N77 438 aaPredicted RBP22.39■■□□□ 1.18
ATG4D-209ENST00000588857 HEPHQ9BQS7 1158 aa22.39■■□□□ 1.18
ATG4D-209ENST00000588857 TRPV5Q9NQA5 729 aa22.39■■□□□ 1.18
ATG4D-209ENST00000588857 FAM53CQ9NYF3 392 aa22.39■■□□□ 1.18
ATG4D-209ENST00000588857 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP22.39■■□□□ 1.18
ATG4D-209ENST00000588857 ZCWPW2A0A1B0GU75 182 aa22.38■■□□□ 1.17
ATG4D-209ENST00000588857 DCXO43602 365 aa22.38■■□□□ 1.17
ATG4D-209ENST00000588857 CRTAMO95727 393 aa22.38■■□□□ 1.17
ATG4D-209ENST00000588857 PIRTP0C851 137 aa22.38■■□□□ 1.17
ATG4D-209ENST00000588857 PAMP19021 973 aa22.38■■□□□ 1.17
ATG4D-209ENST00000588857 GALK1P51570 392 aa22.38■■□□□ 1.17
ATG4D-209ENST00000588857 ZNF234Q14588 700 aa22.38■■□□□ 1.17
ATG4D-209ENST00000588857 E2F5Q15329 346 aa22.38■■□□□ 1.17
ATG4D-209ENST00000588857 SERPINA13PQ6UXR4 307 aa22.38■■□□□ 1.17
ATG4D-209ENST00000588857 LRRC6Q86X45 466 aa22.38■■□□□ 1.17
ATG4D-209ENST00000588857 RIBC1Q8N443 379 aaPredicted RBP22.38■■□□□ 1.17
ATG4D-209ENST00000588857 CHST14Q8NCH0 376 aa22.38■■□□□ 1.17
ATG4D-209ENST00000588857 ARL8AQ96BM9 186 aa22.38■■□□□ 1.17
ATG4D-209ENST00000588857 PGM2Q96G03 612 aa22.38■■□□□ 1.17
ATG4D-209ENST00000588857 ZNF778Q96MU6 729 aa22.38■■□□□ 1.17
ATG4D-209ENST00000588857 PAFAH2Q99487 392 aa22.38■■□□□ 1.17
ATG4D-209ENST00000588857 C1QTNF1Q9BXJ1 281 aa22.38■■□□□ 1.17
ATG4D-209ENST00000588857 STMN4Q9H169 189 aaPredicted RBP22.38■■□□□ 1.17
ATG4D-209ENST00000588857 SUV39H2Q9H5I1 410 aa22.38■■□□□ 1.17
ATG4D-209ENST00000588857 MROH6A6NGR9 719 aa22.38■■□□□ 1.17
ATG4D-209ENST00000588857 FAM159BA6NKW6 160 aa22.38■■□□□ 1.17
ATG4D-209ENST00000588857 H3BQF6 201 aa22.38■■□□□ 1.17
ATG4D-209ENST00000588857 PIAS1O75925 651 aa22.38■■□□□ 1.17
ATG4D-209ENST00000588857 PAPSS2O95340 614 aaPredicted RBP22.38■■□□□ 1.17
ATG4D-209ENST00000588857 SLC8A1P32418 973 aa22.38■■□□□ 1.17
ATG4D-209ENST00000588857 MGAT5Q09328 741 aa22.38■■□□□ 1.17
ATG4D-209ENST00000588857 SKIDA1Q1XH10 827 aa22.38■■□□□ 1.17
ATG4D-209ENST00000588857 TSTD2Q5T7W7 516 aa22.38■■□□□ 1.17
ATG4D-209ENST00000588857 ZNF449Q6P9G9 518 aa22.38■■□□□ 1.17
ATG4D-209ENST00000588857 TDRPQ86YL5 185 aa22.38■■□□□ 1.17
ATG4D-209ENST00000588857 UNC5BQ8IZJ1 945 aa22.38■■□□□ 1.17
ATG4D-209ENST00000588857 PPM1NQ8N819 430 aa22.38■■□□□ 1.17
ATG4D-209ENST00000588857 PIH1D2Q8WWB5 315 aa22.38■■□□□ 1.17
ATG4D-209ENST00000588857 DNASE1L2Q92874 299 aa22.38■■□□□ 1.17
ATG4D-209ENST00000588857 C20orf96Q9NUD7 363 aaPredicted RBP22.38■■□□□ 1.17
ATG4D-209ENST00000588857 HACD3Q9P035 362 aa22.38■■□□□ 1.17
ATG4D-209ENST00000588857 MUTYHQ9UIF7 546 aa22.38■■□□□ 1.17
ATG4D-209ENST00000588857 COL4A2P08572 1712 aa22.37■■□□□ 1.17
ATG4D-209ENST00000588857 EDDM13A0A1B0GTR0 161 aa22.37■■□□□ 1.17
ATG4D-209ENST00000588857 A0A1W2PQ67 120 aa22.37■■□□□ 1.17
ATG4D-209ENST00000588857 SPECC1L-ADORA2AF8WAN1 911 aa22.37■■□□□ 1.17
ATG4D-209ENST00000588857 PRKCGP05129 697 aa22.37■■□□□ 1.17
ATG4D-209ENST00000588857 UGT2B4P06133 528 aa22.37■■□□□ 1.17
ATG4D-209ENST00000588857 CNGA3Q16281 694 aa22.37■■□□□ 1.17
ATG4D-209ENST00000588857 HNRNPA1L2Q32P51 320 aaKnown RBP22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms