RNA–Protein interactions for RNA: ENST00000588507.5

TPM4-210, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-210ENST00000588507 ZBTB20Q9HC78 741 aaPredicted RBP6.96□□□□□ -1.3
TPM4-210ENST00000588507 SIDT1Q9NXL6 827 aaKnown RBP6.96□□□□□ -1.3
TPM4-210ENST00000588507 LRFN1Q9P244 771 aa6.96□□□□□ -1.3
TPM4-210ENST00000588507 LARSQ9P2J5 1176 aaKnown RBP6.96□□□□□ -1.3
TPM4-210ENST00000588507 HBS1LQ9Y450 684 aaKnown RBP6.96□□□□□ -1.3
TPM4-210ENST00000588507 CSAG2Q9Y5P2 127 aa6.96□□□□□ -1.3
TPM4-210ENST00000588507 STYXL1Q9Y6J8 313 aa6.96□□□□□ -1.3
TPM4-210ENST00000588507 DGKBQ9Y6T7 804 aa6.96□□□□□ -1.3
TPM4-210ENST00000588507 WASF2Q9Y6W5 498 aa6.96□□□□□ -1.3
TPM4-210ENST00000588507 SVEP1Q4LDE5 3571 aa6.96□□□□□ -1.3
TPM4-210ENST00000588507 PIKFYVEQ9Y2I7 2098 aa6.96□□□□□ -1.3
TPM4-210ENST00000588507 RASA4BC9J798 803 aa6.95□□□□□ -1.3
TPM4-210ENST00000588507 HHLA1C9JL84 531 aa6.95□□□□□ -1.3
TPM4-210ENST00000588507 PPM1DO15297 605 aa6.95□□□□□ -1.3
TPM4-210ENST00000588507 SGSM2O43147 1006 aa6.95□□□□□ -1.3
TPM4-210ENST00000588507 RASA4O43374 803 aa6.95□□□□□ -1.3
TPM4-210ENST00000588507 TSPAN6O43657 245 aa6.95□□□□□ -1.3
TPM4-210ENST00000588507 CUTAO60888 179 aa6.95□□□□□ -1.3
TPM4-210ENST00000588507 GADD45BO75293 160 aaPredicted RBP6.95□□□□□ -1.3
TPM4-210ENST00000588507 SPAG6O75602 509 aa6.95□□□□□ -1.3
TPM4-210ENST00000588507 ALX3O95076 343 aa6.95□□□□□ -1.3
TPM4-210ENST00000588507 ATE1O95260 518 aa6.95□□□□□ -1.3
TPM4-210ENST00000588507 ECEL1O95672 775 aa6.95□□□□□ -1.3
TPM4-210ENST00000588507 ADRB3P13945 408 aa6.95□□□□□ -1.3
TPM4-210ENST00000588507 KIF11P52732 1056 aa6.95□□□□□ -1.3
TPM4-210ENST00000588507 IL11RAQ14626 422 aa6.95□□□□□ -1.3
TPM4-210ENST00000588507 C3AR1Q16581 482 aa6.95□□□□□ -1.3
TPM4-210ENST00000588507 CREB3L3Q68CJ9 461 aa6.95□□□□□ -1.3
TPM4-210ENST00000588507 RPUSD3Q6P087 351 aaKnown RBP6.95□□□□□ -1.3
TPM4-210ENST00000588507 WDR74Q6RFH5 385 aaPredicted RBP6.95□□□□□ -1.3
TPM4-210ENST00000588507 BRSK2Q8IWQ3 736 aa6.95□□□□□ -1.3
TPM4-210ENST00000588507 ARHGAP18Q8N392 663 aa6.95□□□□□ -1.3
TPM4-210ENST00000588507 GALNT16Q8N428 558 aa6.95□□□□□ -1.3
TPM4-210ENST00000588507 OR10G6Q8NH81 332 aa6.95□□□□□ -1.3
TPM4-210ENST00000588507 ZDHHC1Q8WTX9 485 aa6.95□□□□□ -1.3
TPM4-210ENST00000588507 CCDC114Q96M63 670 aa6.95□□□□□ -1.3
TPM4-210ENST00000588507 AIFM3Q96NN9 605 aa6.95□□□□□ -1.3
TPM4-210ENST00000588507 DDX50Q9BQ39 737 aaKnown RBP6.95□□□□□ -1.3
TPM4-210ENST00000588507 ZHX3Q9H4I2 956 aa6.95□□□□□ -1.3
TPM4-210ENST00000588507 ANLNQ9NQW6 1124 aa6.95□□□□□ -1.3
TPM4-210ENST00000588507 MBNL1Q9NR56 388 aaKnown RBP6.95□□□□□ -1.3
TPM4-210ENST00000588507 IL17CQ9P0M4 197 aa6.95□□□□□ -1.3
TPM4-210ENST00000588507 SLC25A13Q9UJS0 675 aa6.95□□□□□ -1.3
TPM4-210ENST00000588507 CYP46A1Q9Y6A2 500 aa6.95□□□□□ -1.3
TPM4-210ENST00000588507 MYH11P35749 1972 aa6.95□□□□□ -1.3
TPM4-210ENST00000588507 TISP43B9A030 160 aa6.94□□□□□ -1.3
TPM4-210ENST00000588507 PRPF6O94906 941 aaKnown RBP6.94□□□□□ -1.3
TPM4-210ENST00000588507 FGF1P05230 155 aa6.94□□□□□ -1.3
TPM4-210ENST00000588507 HOXD4P09016 255 aaPredicted RBP6.94□□□□□ -1.3
TPM4-210ENST00000588507 FAM200BP0CF97 657 aa6.94□□□□□ -1.3
TPM4-210ENST00000588507 IDEP14735 1019 aa6.94□□□□□ -1.3
TPM4-210ENST00000588507 EGR1P18146 543 aa6.94□□□□□ -1.3
TPM4-210ENST00000588507 SLC11A2P49281 568 aa6.94□□□□□ -1.3
TPM4-210ENST00000588507 NUMBP49757 651 aa6.94□□□□□ -1.3
TPM4-210ENST00000588507 RPS24P62847 133 aaKnown RBP6.94□□□□□ -1.3
TPM4-210ENST00000588507 TNNC1P63316 161 aa6.94□□□□□ -1.3
TPM4-210ENST00000588507 SLC12A1Q13621 1099 aa6.94□□□□□ -1.3
TPM4-210ENST00000588507 NFATC4Q14934 902 aa6.94□□□□□ -1.3
TPM4-210ENST00000588507 POSTNQ15063 836 aa6.94□□□□□ -1.3
TPM4-210ENST00000588507 PDCD2Q16342 344 aaPredicted RBP6.94□□□□□ -1.3
TPM4-210ENST00000588507 HIF1AQ16665 826 aa6.94□□□□□ -1.3
TPM4-210ENST00000588507 FAM133BQ5BKY9 247 aaKnown RBP6.94□□□□□ -1.3
TPM4-210ENST00000588507 ARSIQ5FYB1 569 aa6.94□□□□□ -1.3
TPM4-210ENST00000588507 C20orf194Q5TEA3 1177 aa6.94□□□□□ -1.3
TPM4-210ENST00000588507 ANKRD40Q6AI12 368 aa6.94□□□□□ -1.3
TPM4-210ENST00000588507 NYAP1Q6ZVC0 841 aa6.94□□□□□ -1.3
TPM4-210ENST00000588507 ZBTB2Q8N680 514 aa6.94□□□□□ -1.3
TPM4-210ENST00000588507 MCUQ8NE86 351 aa6.94□□□□□ -1.3
TPM4-210ENST00000588507 SLC2A14Q8TDB8 520 aa6.94□□□□□ -1.3
TPM4-210ENST00000588507 ROBO4Q8WZ75 1007 aa6.94□□□□□ -1.3
TPM4-210ENST00000588507 POMGNT1Q8WZA1 660 aa6.94□□□□□ -1.3
TPM4-210ENST00000588507 SDCCAG3Q96C92 435 aa6.94□□□□□ -1.3
TPM4-210ENST00000588507 PDXPQ96GD0 296 aa6.94□□□□□ -1.3
TPM4-210ENST00000588507 ELMO2Q96JJ3 720 aa6.94□□□□□ -1.3
TPM4-210ENST00000588507 LCORQ96JN0 433 aaPredicted RBP6.94□□□□□ -1.3
TPM4-210ENST00000588507 GPATCH1Q9BRR8 931 aaKnown RBP6.94□□□□□ -1.3
TPM4-210ENST00000588507 FAM213AQ9BRX8 229 aa6.94□□□□□ -1.3
TPM4-210ENST00000588507 FEM1AQ9BSK4 669 aa6.94□□□□□ -1.3
TPM4-210ENST00000588507 C1QTNF7Q9BXJ2 289 aa6.94□□□□□ -1.3
TPM4-210ENST00000588507 TMEM60Q9H2L4 133 aa6.94□□□□□ -1.3
TPM4-210ENST00000588507 AKIRIN1Q9H9L7 192 aaPredicted RBP6.94□□□□□ -1.3
TPM4-210ENST00000588507 LRTM1Q9HBL6 345 aa6.94□□□□□ -1.3
TPM4-210ENST00000588507 PNPLA8Q9NP80 782 aa6.94□□□□□ -1.3
TPM4-210ENST00000588507 NPDC1Q9NQX5 325 aaPredicted RBP6.94□□□□□ -1.3
TPM4-210ENST00000588507 SPATS2LQ9NUQ6 558 aaKnown RBP6.94□□□□□ -1.3
TPM4-210ENST00000588507 ARMCX1Q9P291 453 aa6.94□□□□□ -1.3
TPM4-210ENST00000588507 SEC14L3Q9UDX4 400 aa6.94□□□□□ -1.3
TPM4-210ENST00000588507 SNX7Q9UNH6 387 aa6.94□□□□□ -1.3
TPM4-210ENST00000588507 MEMO1Q9Y316 297 aa6.94□□□□□ -1.3
TPM4-210ENST00000588507 K7ENM7 598 aa6.93□□□□□ -1.3
TPM4-210ENST00000588507 RNF103O00237 685 aa6.93□□□□□ -1.3
TPM4-210ENST00000588507 NEMP1O14524 444 aa6.93□□□□□ -1.3
TPM4-210ENST00000588507 SLC19A2O60779 497 aa6.93□□□□□ -1.3
TPM4-210ENST00000588507 EIF5BO60841 1220 aaKnown RBP6.93□□□□□ -1.3
TPM4-210ENST00000588507 TNNC2P02585 160 aa6.93□□□□□ -1.3
TPM4-210ENST00000588507 PYGMP11217 842 aa6.93□□□□□ -1.3
TPM4-210ENST00000588507 CCDC130P13994 396 aa6.93□□□□□ -1.3
TPM4-210ENST00000588507 BMP7P18075 431 aa6.93□□□□□ -1.3
TPM4-210ENST00000588507 CHRNA4P43681 627 aa6.93□□□□□ -1.3
TPM4-210ENST00000588507 PDE1BQ01064 536 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms