RNA–Protein interactions for RNA: ENST00000587327.5

PRKCSH-205, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PRKCSH, Length 2,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-205ENST00000587327 MYLPFQ96A32 169 aa16.97■□□□□ 0.31
PRKCSH-205ENST00000587327 GAD1Q99259 594 aa16.97■□□□□ 0.31
PRKCSH-205ENST00000587327 OLFM1Q99784 485 aa16.97■□□□□ 0.31
PRKCSH-205ENST00000587327 MTG1Q9BT17 334 aaPredicted RBP16.97■□□□□ 0.31
PRKCSH-205ENST00000587327 SENP6Q9GZR1 1112 aaPredicted RBP16.97■□□□□ 0.31
PRKCSH-205ENST00000587327 FAM105AQ9NUU6 356 aa16.97■□□□□ 0.31
PRKCSH-205ENST00000587327 RBM22Q9NW64 420 aaKnown RBP eCLIP16.97■□□□□ 0.313e-7■■■■□ 21.7
PRKCSH-205ENST00000587327 CCDC167Q9P0B6 97 aa16.97■□□□□ 0.31
PRKCSH-205ENST00000587327 MYOCOSA0A1B0GUC4 107 aa16.96■□□□□ 0.31
PRKCSH-205ENST00000587327 M0QZ92 97 aa16.96■□□□□ 0.31
PRKCSH-205ENST00000587327 FGF10O15520 208 aaPredicted RBP16.96■□□□□ 0.31
PRKCSH-205ENST00000587327 ASLP04424 464 aa16.96■□□□□ 0.31
PRKCSH-205ENST00000587327 SLC10A3P09131 477 aa16.96■□□□□ 0.31
PRKCSH-205ENST00000587327 CYBAP13498 195 aa16.96■□□□□ 0.31
PRKCSH-205ENST00000587327 PSMC3P17980 439 aa16.96■□□□□ 0.31
PRKCSH-205ENST00000587327 HOXC13P31276 330 aa16.96■□□□□ 0.31
PRKCSH-205ENST00000587327 TRAP1Q12931 704 aaKnown RBP16.96■□□□□ 0.31
PRKCSH-205ENST00000587327 SEPT6Q14141 434 aa16.96■□□□□ 0.31
PRKCSH-205ENST00000587327 PPP1R3AQ16821 1122 aa16.96■□□□□ 0.31
PRKCSH-205ENST00000587327 AGKQ53H12 422 aa16.96■□□□□ 0.31
PRKCSH-205ENST00000587327 GNASQ5JWF2 1037 aa16.96■□□□□ 0.31
PRKCSH-205ENST00000587327 REP15Q6BDI9 236 aa16.96■□□□□ 0.31
PRKCSH-205ENST00000587327 CUZD1Q86UP6 607 aa16.96■□□□□ 0.31
PRKCSH-205ENST00000587327 RNF135Q8IUD6 432 aa16.96■□□□□ 0.31
PRKCSH-205ENST00000587327 ZNF597Q96LX8 424 aa16.96■□□□□ 0.31
PRKCSH-205ENST00000587327 OCEL1Q9H607 264 aa16.96■□□□□ 0.31
PRKCSH-205ENST00000587327 CATSPERBQ9H7T0 1116 aa16.96■□□□□ 0.31
PRKCSH-205ENST00000587327 ZFYVE28Q9HCC9 887 aa16.96■□□□□ 0.31
PRKCSH-205ENST00000587327 SPAG4Q9NPE6 437 aa16.96■□□□□ 0.31
PRKCSH-205ENST00000587327 NDFIP2Q9NV92 336 aa16.96■□□□□ 0.31
PRKCSH-205ENST00000587327 PADI4Q9UM07 663 aa16.96■□□□□ 0.31
PRKCSH-205ENST00000587327 DMTF1Q9Y222 760 aa16.96■□□□□ 0.31
PRKCSH-205ENST00000587327 C7orf72A4D263 438 aa16.96■□□□□ 0.31
PRKCSH-205ENST00000587327 PRORSD1PA6NEY8 169 aa16.96■□□□□ 0.31
PRKCSH-205ENST00000587327 CCDC160A6NGH7 325 aa16.96■□□□□ 0.31
PRKCSH-205ENST00000587327 PAGE1O75459 146 aa16.96■□□□□ 0.31
PRKCSH-205ENST00000587327 ARSAP15289 507 aa16.96■□□□□ 0.31
PRKCSH-205ENST00000587327 BDNFP23560 247 aa16.96■□□□□ 0.31
PRKCSH-205ENST00000587327 NR1H2P55055 460 aa16.96■□□□□ 0.31
PRKCSH-205ENST00000587327 GALNT1Q10472 559 aaPredicted RBP16.96■□□□□ 0.31
PRKCSH-205ENST00000587327 NRF1Q16656 503 aa16.96■□□□□ 0.31
PRKCSH-205ENST00000587327 ZNF789Q5FWF6 425 aa16.96■□□□□ 0.31
PRKCSH-205ENST00000587327 KLC3Q6P597 504 aa16.96■□□□□ 0.31
PRKCSH-205ENST00000587327 SCML4Q8N228 414 aa16.96■□□□□ 0.31
PRKCSH-205ENST00000587327 LPPQ93052 612 aa16.96■□□□□ 0.31
PRKCSH-205ENST00000587327 RTP3Q9BQQ7 232 aa16.96■□□□□ 0.31
PRKCSH-205ENST00000587327 SEMA6AQ9H2E6 1030 aa16.96■□□□□ 0.31
PRKCSH-205ENST00000587327 COQ10BQ9H8M1 238 aa16.96■□□□□ 0.31
PRKCSH-205ENST00000587327 MIOSQ9NXC5 875 aa16.96■□□□□ 0.31
PRKCSH-205ENST00000587327 COL4A4P53420 1690 aaPredicted RBP16.96■□□□□ 0.3
PRKCSH-205ENST00000587327 HEATR9A2RTY3 570 aa16.95■□□□□ 0.3
PRKCSH-205ENST00000587327 CHRNA1P02708 482 aa16.95■□□□□ 0.3
PRKCSH-205ENST00000587327 SNRPB2P08579 225 aaKnown RBP16.95■□□□□ 0.3
PRKCSH-205ENST00000587327 RBP1P09455 135 aa16.95■□□□□ 0.3
PRKCSH-205ENST00000587327 LTA4HP09960 611 aaKnown RBP16.95■□□□□ 0.3
PRKCSH-205ENST00000587327 CCDC166P0CW27 439 aa16.95■□□□□ 0.3
PRKCSH-205ENST00000587327 HDCP19113 662 aa16.95■□□□□ 0.3
PRKCSH-205ENST00000587327 HTR7P34969 479 aa16.95■□□□□ 0.3
PRKCSH-205ENST00000587327 LEPRP48357 1165 aaKnown RBP16.95■□□□□ 0.3
PRKCSH-205ENST00000587327 INHBCP55103 352 aa16.95■□□□□ 0.3
PRKCSH-205ENST00000587327 PABPC1LQ4VXU2 614 aaKnown RBP16.95■□□□□ 0.3
PRKCSH-205ENST00000587327 BRMS1LQ5PSV4 323 aa16.95■□□□□ 0.3
PRKCSH-205ENST00000587327 ARTNQ5T4W7 220 aa16.95■□□□□ 0.3
PRKCSH-205ENST00000587327 MANEALQ5VSG8 457 aa16.95■□□□□ 0.3
PRKCSH-205ENST00000587327 TIGD7Q6NT04 549 aaPredicted RBP16.95■□□□□ 0.3
PRKCSH-205ENST00000587327 BORAQ6PGQ7 559 aa16.95■□□□□ 0.3
PRKCSH-205ENST00000587327 RPS27LQ71UM5 84 aaKnown RBP16.95■□□□□ 0.3
PRKCSH-205ENST00000587327 BEND5Q7L4P6 421 aa16.95■□□□□ 0.3
PRKCSH-205ENST00000587327 CHERPQ8IWX8 916 aaKnown RBP16.95■□□□□ 0.3
PRKCSH-205ENST00000587327 LRTOMTQ8WZ04 291 aa16.95■□□□□ 0.3
PRKCSH-205ENST00000587327 TRIB2Q92519 343 aa16.95■□□□□ 0.3
PRKCSH-205ENST00000587327 LPGAT1Q92604 370 aa16.95■□□□□ 0.3
PRKCSH-205ENST00000587327 UBXN10Q96LJ8 280 aa16.95■□□□□ 0.3
PRKCSH-205ENST00000587327 ATXN10Q9UBB4 475 aa16.95■□□□□ 0.3
PRKCSH-205ENST00000587327 CD300AQ9UGN4 299 aa16.95■□□□□ 0.3
PRKCSH-205ENST00000587327 AK5Q9Y6K8 562 aa16.95■□□□□ 0.3
PRKCSH-205ENST00000587327 DNAH12Q6ZR08 3092 aa16.95■□□□□ 0.3
PRKCSH-205ENST00000587327 PDLIM1O00151 329 aa16.95■□□□□ 0.3
PRKCSH-205ENST00000587327 IRAK2O43187 625 aa16.95■□□□□ 0.3
PRKCSH-205ENST00000587327 KPNA6O60684 536 aa16.95■□□□□ 0.3
PRKCSH-205ENST00000587327 GPC4O75487 556 aa16.95■□□□□ 0.3
PRKCSH-205ENST00000587327 PLK1P53350 603 aa16.95■□□□□ 0.3
PRKCSH-205ENST00000587327 RALGDSQ12967 914 aa16.95■□□□□ 0.3
PRKCSH-205ENST00000587327 IKBKEQ14164 716 aa16.95■□□□□ 0.3
PRKCSH-205ENST00000587327 ACAP2Q15057 778 aa16.95■□□□□ 0.3
PRKCSH-205ENST00000587327 ADRM1Q16186 407 aa16.95■□□□□ 0.3
PRKCSH-205ENST00000587327 TIGD5Q53EQ6 642 aa16.95■□□□□ 0.3
PRKCSH-205ENST00000587327 FAM171BQ6P995 826 aa16.95■□□□□ 0.3
PRKCSH-205ENST00000587327 PTAR1Q7Z6K3 402 aaPredicted RBP16.95■□□□□ 0.3
PRKCSH-205ENST00000587327 SPNS2Q8IVW8 549 aa16.95■□□□□ 0.3
PRKCSH-205ENST00000587327 ALDH16A1Q8IZ83 802 aa16.95■□□□□ 0.3
PRKCSH-205ENST00000587327 RIN3Q8TB24 985 aa16.95■□□□□ 0.3
PRKCSH-205ENST00000587327 CALML6Q8TD86 181 aa16.95■□□□□ 0.3
PRKCSH-205ENST00000587327 EZH1Q92800 747 aaPredicted RBP16.95■□□□□ 0.3
PRKCSH-205ENST00000587327 SLCO4A1Q96BD0 722 aa16.95■□□□□ 0.3
PRKCSH-205ENST00000587327 PHF21BQ96EK2 531 aa16.95■□□□□ 0.3
PRKCSH-205ENST00000587327 DUS3LQ96G46 650 aaKnown RBP16.95■□□□□ 0.3
PRKCSH-205ENST00000587327 FCRL2Q96LA5 508 aaPredicted RBP16.95■□□□□ 0.3
PRKCSH-205ENST00000587327 SLC25A23Q9BV35 468 aa16.95■□□□□ 0.3
PRKCSH-205ENST00000587327 TRIM62Q9BVG3 475 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms