RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 LVRNQ6Q4G3 990 aa19.52■□□□□ 0.72
TRAF4-216ENST00000586813 WDR36Q8NI36 951 aaKnown RBP19.52■□□□□ 0.72
TRAF4-216ENST00000586813 SNRNP27Q8WVK2 155 aaKnown RBP19.52■□□□□ 0.72
TRAF4-216ENST00000586813 SCG3Q8WXD2 468 aaKnown RBP19.52■□□□□ 0.72
TRAF4-216ENST00000586813 TSACCQ96A04 125 aaPredicted RBP19.52■□□□□ 0.72
TRAF4-216ENST00000586813 EDEM3Q9BZQ6 932 aa19.52■□□□□ 0.72
TRAF4-216ENST00000586813 GULP1Q9UBP9 304 aa19.52■□□□□ 0.72
TRAF4-216ENST00000586813 LIMA1Q9UHB6 759 aaKnown RBP19.52■□□□□ 0.72
TRAF4-216ENST00000586813 CCDC187A0A096LP49 1063 aa19.51■□□□□ 0.71
TRAF4-216ENST00000586813 J3KR12 359 aa19.51■□□□□ 0.71
TRAF4-216ENST00000586813 NTN3O00634 580 aaPredicted RBP19.51■□□□□ 0.71
TRAF4-216ENST00000586813 ZIC2O95409 532 aaPredicted RBP19.51■□□□□ 0.71
TRAF4-216ENST00000586813 CTSEP14091 401 aa19.51■□□□□ 0.71
TRAF4-216ENST00000586813 HTR7P34969 479 aa19.51■□□□□ 0.71
TRAF4-216ENST00000586813 MLLT3P42568 568 aaPredicted RBP19.51■□□□□ 0.71
TRAF4-216ENST00000586813 OGDHQ02218 1023 aa19.51■□□□□ 0.71
TRAF4-216ENST00000586813 UBXN1Q04323 297 aa19.51■□□□□ 0.71
TRAF4-216ENST00000586813 INPP5AQ14642 412 aa19.51■□□□□ 0.71
TRAF4-216ENST00000586813 AGERQ15109 404 aa19.51■□□□□ 0.71
TRAF4-216ENST00000586813 ERAP2Q6P179 960 aa19.51■□□□□ 0.71
TRAF4-216ENST00000586813 DCUN1D2Q6PH85 259 aa19.51■□□□□ 0.71
TRAF4-216ENST00000586813 BRAT1Q6PJG6 821 aa19.51■□□□□ 0.71
TRAF4-216ENST00000586813 ENPP7Q6UWV6 458 aa19.51■□□□□ 0.71
TRAF4-216ENST00000586813 RBM43Q6ZSC3 357 aaKnown RBP19.51■□□□□ 0.71
TRAF4-216ENST00000586813 CLEC14AQ86T13 490 aa19.51■□□□□ 0.71
TRAF4-216ENST00000586813 ZNF605Q86T29 641 aa19.51■□□□□ 0.71
TRAF4-216ENST00000586813 ZSWIM9Q86XI8 627 aa19.51■□□□□ 0.71
TRAF4-216ENST00000586813 ARL14Q8N4G2 192 aa19.51■□□□□ 0.71
TRAF4-216ENST00000586813 ANKRD20A12PQ8NF67 263 aa19.51■□□□□ 0.71
TRAF4-216ENST00000586813 CCDC97Q96F63 343 aaPredicted RBP19.51■□□□□ 0.71
TRAF4-216ENST00000586813 WBP1Q96G27 269 aa19.51■□□□□ 0.71
TRAF4-216ENST00000586813 ZNF641Q96N77 438 aaPredicted RBP19.51■□□□□ 0.71
TRAF4-216ENST00000586813 TUBGCP5Q96RT8 1024 aa19.51■□□□□ 0.71
TRAF4-216ENST00000586813 APOOQ9BUR5 198 aa19.51■□□□□ 0.71
TRAF4-216ENST00000586813 LMBRD1Q9NUN5 540 aa19.51■□□□□ 0.71
TRAF4-216ENST00000586813 RABGEF1Q9UJ41 708 aa19.51■□□□□ 0.71
TRAF4-216ENST00000586813 ATP8A1Q9Y2Q0 1164 aa19.51■□□□□ 0.71
TRAF4-216ENST00000586813 OR1A2Q9Y585 309 aa19.51■□□□□ 0.71
TRAF4-216ENST00000586813 ZNF462Q96JM2 2506 aa19.51■□□□□ 0.71
TRAF4-216ENST00000586813 PRAMEF11O60813 436 aa19.5■□□□□ 0.71
TRAF4-216ENST00000586813 TNFSF15O95150 251 aa19.5■□□□□ 0.71
TRAF4-216ENST00000586813 PCCBP05166 539 aa19.5■□□□□ 0.71
TRAF4-216ENST00000586813 DESP17661 470 aa19.5■□□□□ 0.71
TRAF4-216ENST00000586813 LIG3P49916 1009 aa19.5■□□□□ 0.71
TRAF4-216ENST00000586813 NDST2P52849 883 aa19.5■□□□□ 0.71
TRAF4-216ENST00000586813 MYL5Q02045 173 aa19.5■□□□□ 0.71
TRAF4-216ENST00000586813 NYAP1Q6ZVC0 841 aa19.5■□□□□ 0.71
TRAF4-216ENST00000586813 RD3Q7Z3Z2 195 aa19.5■□□□□ 0.71
TRAF4-216ENST00000586813 CAMK1DQ8IU85 385 aa19.5■□□□□ 0.71
TRAF4-216ENST00000586813 MCOLN2Q8IZK6 566 aa19.5■□□□□ 0.71
TRAF4-216ENST00000586813 SDR16C5Q8N3Y7 309 aa19.5■□□□□ 0.71
TRAF4-216ENST00000586813 CCDC74AQ96AQ1 378 aa19.5■□□□□ 0.71
TRAF4-216ENST00000586813 LIN37Q96GY3 246 aaPredicted RBP19.5■□□□□ 0.71
TRAF4-216ENST00000586813 CELF6Q96J87 481 aaKnown RBP19.5■□□□□ 0.71
TRAF4-216ENST00000586813 ERGIC2Q96RQ1 377 aa19.5■□□□□ 0.71
TRAF4-216ENST00000586813 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.5■□□□□ 0.71
TRAF4-216ENST00000586813 GPATCH2LQ9NWQ4 482 aa19.5■□□□□ 0.71
TRAF4-216ENST00000586813 DONSONQ9NYP3 566 aa19.5■□□□□ 0.71
TRAF4-216ENST00000586813 KLQ9UEF7 1012 aa19.5■□□□□ 0.71
TRAF4-216ENST00000586813 AP4E1Q9UPM8 1137 aa19.5■□□□□ 0.71
TRAF4-216ENST00000586813 BUB1BO60566 1050 aaPredicted RBP19.49■□□□□ 0.71
TRAF4-216ENST00000586813 PRKCGP05129 697 aa19.49■□□□□ 0.71
TRAF4-216ENST00000586813 ITGA2BP08514 1039 aa19.49■□□□□ 0.71
TRAF4-216ENST00000586813 RGRP47804 291 aa19.49■□□□□ 0.71
TRAF4-216ENST00000586813 SRP54P61011 504 aaKnown RBP19.49■□□□□ 0.71
TRAF4-216ENST00000586813 MTM1Q13496 603 aa19.49■□□□□ 0.71
TRAF4-216ENST00000586813 ACAD10Q6JQN1 1059 aa19.49■□□□□ 0.71
TRAF4-216ENST00000586813 B3GNT8Q7Z7M8 397 aa19.49■□□□□ 0.71
TRAF4-216ENST00000586813 GKN2Q86XP6 184 aa19.49■□□□□ 0.71
TRAF4-216ENST00000586813 ATL2Q8NHH9 583 aa19.49■□□□□ 0.71
TRAF4-216ENST00000586813 PDXPQ96GD0 296 aa19.49■□□□□ 0.71
TRAF4-216ENST00000586813 WDR92Q96MX6 357 aa19.49■□□□□ 0.71
TRAF4-216ENST00000586813 ATP13A3Q9H7F0 1226 aa19.49■□□□□ 0.71
TRAF4-216ENST00000586813 GPR34Q9UPC5 381 aa19.49■□□□□ 0.71
TRAF4-216ENST00000586813 COL6A6A6NMZ7 2263 aa19.49■□□□□ 0.71
TRAF4-216ENST00000586813 CAPN8A6NHC0 703 aa19.48■□□□□ 0.71
TRAF4-216ENST00000586813 D6RAR5 112 aa19.48■□□□□ 0.71
TRAF4-216ENST00000586813 K7ENP7 123 aa19.48■□□□□ 0.71
TRAF4-216ENST00000586813 SERPINA4P29622 427 aa19.48■□□□□ 0.71
TRAF4-216ENST00000586813 PAPOLAP51003 745 aaKnown RBP19.48■□□□□ 0.71
TRAF4-216ENST00000586813 CLN3Q13286 438 aa19.48■□□□□ 0.71
TRAF4-216ENST00000586813 KCTD16Q68DU8 428 aa19.48■□□□□ 0.71
TRAF4-216ENST00000586813 INO80CQ6PI98 192 aaPredicted RBP19.48■□□□□ 0.71
TRAF4-216ENST00000586813 CLEC17AQ6ZS10 378 aa19.48■□□□□ 0.71
TRAF4-216ENST00000586813 TSEN2Q8NCE0 465 aaKnown RBP19.48■□□□□ 0.71
TRAF4-216ENST00000586813 TTC9Q92623 222 aa19.48■□□□□ 0.71
TRAF4-216ENST00000586813 GFM1Q96RP9 751 aaKnown RBP19.48■□□□□ 0.71
TRAF4-216ENST00000586813 RBM15Q96T37 977 aaKnown RBP eCLIP19.48■□□□□ 0.713e-6■■■□□ 16.9
TRAF4-216ENST00000586813 SLC39A8Q9C0K1 460 aa19.48■□□□□ 0.71
TRAF4-216ENST00000586813 DHX35Q9H5Z1 703 aaKnown RBP19.48■□□□□ 0.71
TRAF4-216ENST00000586813 SETXQ7Z333 2677 aaKnown RBP19.47■□□□□ 0.71
TRAF4-216ENST00000586813 ARHGAP42A6NI28 874 aa19.47■□□□□ 0.71
TRAF4-216ENST00000586813 EIF3CLB5ME19 914 aaKnown RBP19.47■□□□□ 0.71
TRAF4-216ENST00000586813 EEF2KO00418 725 aaKnown RBP19.47■□□□□ 0.71
TRAF4-216ENST00000586813 RPLP0P05388 317 aaKnown RBP19.47■□□□□ 0.71
TRAF4-216ENST00000586813 FERP16591 822 aa19.47■□□□□ 0.71
TRAF4-216ENST00000586813 PSMA2P25787 234 aa19.47■□□□□ 0.71
TRAF4-216ENST00000586813 CSNK1DP48730 415 aa19.47■□□□□ 0.71
TRAF4-216ENST00000586813 RALGDSQ12967 914 aa19.47■□□□□ 0.71
TRAF4-216ENST00000586813 CA9Q16790 459 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms