RNA–Protein interactions for RNA: ENST00000586718.1

NPC1-204, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 3

Gene NPC1, Length 574 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-204ENST00000586718 ZNF641Q96N77 438 aaPredicted RBP8.59□□□□□ -1.03
NPC1-204ENST00000586718 TRIB3Q96RU7 358 aa8.59□□□□□ -1.03
NPC1-204ENST00000586718 PAFAH2Q99487 392 aa8.59□□□□□ -1.03
NPC1-204ENST00000586718 SH3GL2Q99962 352 aa8.59□□□□□ -1.03
NPC1-204ENST00000586718 P2RY13Q9BPV8 354 aa8.59□□□□□ -1.03
NPC1-204ENST00000586718 HEPHQ9BQS7 1158 aa8.59□□□□□ -1.03
NPC1-204ENST00000586718 FAM167BQ9BTA0 163 aa8.59□□□□□ -1.03
NPC1-204ENST00000586718 KIFC1Q9BW19 673 aa8.59□□□□□ -1.03
NPC1-204ENST00000586718 CPEB1Q9BZB8 566 aaKnown RBP8.59□□□□□ -1.03
NPC1-204ENST00000586718 TRABDQ9H4I3 376 aa8.59□□□□□ -1.03
NPC1-204ENST00000586718 TRPV5Q9NQA5 729 aa8.59□□□□□ -1.03
NPC1-204ENST00000586718 C20orf96Q9NUD7 363 aaPredicted RBP8.59□□□□□ -1.03
NPC1-204ENST00000586718 BCCIPQ9P287 314 aaKnown RBP eCLIP8.59□□□□□ -1.03
NPC1-204ENST00000586718 PRKAG3Q9UGI9 489 aa8.59□□□□□ -1.03
NPC1-204ENST00000586718 IL36AQ9UHA7 158 aa8.59□□□□□ -1.03
NPC1-204ENST00000586718 PCDHB9Q9Y5E1 797 aa8.59□□□□□ -1.03
NPC1-204ENST00000586718 PCDHGC4Q9Y5F7 938 aa8.59□□□□□ -1.03
NPC1-204ENST00000586718 NFS1Q9Y697 457 aa8.59□□□□□ -1.03
NPC1-204ENST00000586718 PIAS3Q9Y6X2 628 aa8.59□□□□□ -1.03
NPC1-204ENST00000586718 FAM169AQ9Y6X4 670 aa8.59□□□□□ -1.03
NPC1-204ENST00000586718 C5orf42Q9H799 3197 aa8.59□□□□□ -1.03
NPC1-204ENST00000586718 ZNF106Q9H2Y7 1883 aaKnown RBP8.58□□□□□ -1.04
NPC1-204ENST00000586718 IQANK1A0A1B0GTG1 560 aa8.58□□□□□ -1.04
NPC1-204ENST00000586718 CAPN8A6NHC0 703 aa8.58□□□□□ -1.04
NPC1-204ENST00000586718 OTOL1A6NHN0 477 aaPredicted RBP8.58□□□□□ -1.04
NPC1-204ENST00000586718 FAM159BA6NKW6 160 aa8.58□□□□□ -1.04
NPC1-204ENST00000586718 TTC34A8MYJ7 566 aa8.58□□□□□ -1.04
NPC1-204ENST00000586718 PRRT4C9JH25 899 aa8.58□□□□□ -1.04
NPC1-204ENST00000586718 C1QTNF3-AMACRE9PGA6 284 aa8.58□□□□□ -1.04
NPC1-204ENST00000586718 SPECC1L-ADORA2AF8WAN1 911 aa8.58□□□□□ -1.04
NPC1-204ENST00000586718 HTRA2O43464 458 aaPredicted RBP8.58□□□□□ -1.04
NPC1-204ENST00000586718 RNF40O75150 1001 aa8.58□□□□□ -1.04
NPC1-204ENST00000586718 UGT2B4P06133 528 aa8.58□□□□□ -1.04
NPC1-204ENST00000586718 PRKCHP24723 683 aa8.58□□□□□ -1.04
NPC1-204ENST00000586718 CNTFP26441 200 aa8.58□□□□□ -1.04
NPC1-204ENST00000586718 OAS2P29728 719 aaKnown RBP8.58□□□□□ -1.04
NPC1-204ENST00000586718 CTHP32929 405 aa8.58□□□□□ -1.04
NPC1-204ENST00000586718 SLCO1A2P46721 670 aa8.58□□□□□ -1.04
NPC1-204ENST00000586718 SERPINB9P50453 376 aa8.58□□□□□ -1.04
NPC1-204ENST00000586718 POLR2LP62875 67 aaKnown RBP8.58□□□□□ -1.04
NPC1-204ENST00000586718 PRAMEP78395 509 aa8.58□□□□□ -1.04
NPC1-204ENST00000586718 ELAVL3Q14576 367 aaKnown RBP8.58□□□□□ -1.04
NPC1-204ENST00000586718 ZNF234Q14588 700 aa8.58□□□□□ -1.04
NPC1-204ENST00000586718 STARD3Q14849 445 aa8.58□□□□□ -1.04
NPC1-204ENST00000586718 EFTUD2Q15029 972 aaKnown RBP eCLIP8.58□□□□□ -1.042e-24■■■■■ 29.7
NPC1-204ENST00000586718 QPCTQ16769 361 aa8.58□□□□□ -1.04
NPC1-204ENST00000586718 PTPRNQ16849 979 aa8.58□□□□□ -1.04
NPC1-204ENST00000586718 UGP2Q16851 508 aa8.58□□□□□ -1.04
NPC1-204ENST00000586718 SKIDA1Q1XH10 827 aa8.58□□□□□ -1.04
NPC1-204ENST00000586718 HNRNPA1L2Q32P51 320 aaKnown RBP8.58□□□□□ -1.04
NPC1-204ENST00000586718 KBTBD12Q3ZCT8 623 aa8.58□□□□□ -1.04
NPC1-204ENST00000586718 DGKKQ5KSL6 1271 aa8.58□□□□□ -1.04
NPC1-204ENST00000586718 UBAP2Q5T6F2 1119 aaKnown RBP8.58□□□□□ -1.04
NPC1-204ENST00000586718 TSTD2Q5T7W7 516 aa8.58□□□□□ -1.04
NPC1-204ENST00000586718 LGSNQ5TDP6 509 aa8.58□□□□□ -1.04
NPC1-204ENST00000586718 BRAT1Q6PJG6 821 aa8.58□□□□□ -1.04
NPC1-204ENST00000586718 GDPD4Q6W3E5 623 aa8.58□□□□□ -1.04
NPC1-204ENST00000586718 DPY19L3Q6ZPD9 716 aa8.58□□□□□ -1.04
NPC1-204ENST00000586718 CYS1Q717R9 158 aa8.58□□□□□ -1.04
NPC1-204ENST00000586718 TMEM135Q86UB9 458 aa8.58□□□□□ -1.04
NPC1-204ENST00000586718 SLC26A11Q86WA9 606 aa8.58□□□□□ -1.04
NPC1-204ENST00000586718 RALGPS2Q86X27 583 aaPredicted RBP8.58□□□□□ -1.04
NPC1-204ENST00000586718 LRRC6Q86X45 466 aa8.58□□□□□ -1.04
NPC1-204ENST00000586718 CAMK1DQ8IU85 385 aa8.58□□□□□ -1.04
NPC1-204ENST00000586718 PHTF2Q8N3S3 785 aa8.58□□□□□ -1.04
NPC1-204ENST00000586718 PPM1NQ8N819 430 aa8.58□□□□□ -1.04
NPC1-204ENST00000586718 CALML6Q8TD86 181 aa8.58□□□□□ -1.04
NPC1-204ENST00000586718 BRSK1Q8TDC3 778 aa8.58□□□□□ -1.04
NPC1-204ENST00000586718 SORCS1Q8WY21 1168 aa8.58□□□□□ -1.04
NPC1-204ENST00000586718 PGM2Q96G03 612 aa8.58□□□□□ -1.04
NPC1-204ENST00000586718 ATP6V1G3Q96LB4 118 aa8.58□□□□□ -1.04
NPC1-204ENST00000586718 GPR63Q9BZJ6 419 aa8.58□□□□□ -1.04
NPC1-204ENST00000586718 SUV39H2Q9H5I1 410 aa8.58□□□□□ -1.04
NPC1-204ENST00000586718 KCNK12Q9HB15 430 aa8.58□□□□□ -1.04
NPC1-204ENST00000586718 TMBIM4Q9HC24 238 aa8.58□□□□□ -1.04
NPC1-204ENST00000586718 DYRK4Q9NR20 520 aa8.58□□□□□ -1.04
NPC1-204ENST00000586718 CHRAC1Q9NRG0 131 aa8.58□□□□□ -1.04
NPC1-204ENST00000586718 SENP1Q9P0U3 644 aa8.58□□□□□ -1.04
NPC1-204ENST00000586718 VPS18Q9P253 973 aa8.58□□□□□ -1.04
NPC1-204ENST00000586718 SUN2Q9UH99 717 aa8.58□□□□□ -1.04
NPC1-204ENST00000586718 LGALS13Q9UHV8 139 aa8.58□□□□□ -1.04
NPC1-204ENST00000586718 SLCO3A1Q9UIG8 710 aa8.58□□□□□ -1.04
NPC1-204ENST00000586718 RABGEF1Q9UJ41 708 aa8.58□□□□□ -1.04
NPC1-204ENST00000586718 RIMKLBQ9ULI2 386 aa8.58□□□□□ -1.04
NPC1-204ENST00000586718 PHTF1Q9UMS5 762 aa8.58□□□□□ -1.04
NPC1-204ENST00000586718 ZNF711Q9Y462 761 aa8.58□□□□□ -1.04
NPC1-204ENST00000586718 SCN8AQ9UQD0 1980 aa8.57□□□□□ -1.04
NPC1-204ENST00000586718 XIRP2A4UGR9 3374 aa8.57□□□□□ -1.04
NPC1-204ENST00000586718 A0A0J9YYE9 177 aa8.57□□□□□ -1.04
NPC1-204ENST00000586718 CCDC78A2IDD5 438 aa8.57□□□□□ -1.04
NPC1-204ENST00000586718 ANKRD66B4E2M5 251 aa8.57□□□□□ -1.04
NPC1-204ENST00000586718 AGPSO00116 658 aa8.57□□□□□ -1.04
NPC1-204ENST00000586718 PFDN6O15212 129 aa8.57□□□□□ -1.04
NPC1-204ENST00000586718 STX7O15400 261 aaKnown RBP8.57□□□□□ -1.04
NPC1-204ENST00000586718 FZD6O60353 706 aa8.57□□□□□ -1.04
NPC1-204ENST00000586718 RNASEH1O60930 286 aaKnown RBP8.57□□□□□ -1.04
NPC1-204ENST00000586718 ZNF821O75541 412 aaPredicted RBP8.57□□□□□ -1.04
NPC1-204ENST00000586718 RPP40O75818 363 aaKnown RBP8.57□□□□□ -1.04
NPC1-204ENST00000586718 KRT37O76014 449 aa8.57□□□□□ -1.04
NPC1-204ENST00000586718 KRT38O76015 456 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms