RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 ZNF528Q3MIS6 628 aa13.71□□□□□ -0.21
VMP1-203ENST00000586245 SYCP2LQ5T4T6 812 aa13.71□□□□□ -0.21
VMP1-203ENST00000586245 AGBL4Q5VU57 503 aa13.71□□□□□ -0.21
VMP1-203ENST00000586245 NAPEPLDQ6IQ20 393 aa13.71□□□□□ -0.21
VMP1-203ENST00000586245 USP45Q70EL2 814 aa13.71□□□□□ -0.21
VMP1-203ENST00000586245 LINC00523Q86TU6 105 aa13.71□□□□□ -0.21
VMP1-203ENST00000586245 ZSWIM9Q86XI8 627 aa13.71□□□□□ -0.21
VMP1-203ENST00000586245 KLHDC8BQ8IXV7 354 aa13.71□□□□□ -0.21
VMP1-203ENST00000586245 PDCD7Q8N8D1 485 aaKnown RBP13.71□□□□□ -0.21
VMP1-203ENST00000586245 OR14C36Q8NHC7 312 aa13.71□□□□□ -0.21
VMP1-203ENST00000586245 PIH1D2Q8WWB5 315 aa13.71□□□□□ -0.21
VMP1-203ENST00000586245 SPOCK2Q92563 424 aa13.71□□□□□ -0.21
VMP1-203ENST00000586245 TBL1YQ9BQ87 522 aa13.71□□□□□ -0.21
VMP1-203ENST00000586245 TRIM51Q9BSJ1 452 aa13.71□□□□□ -0.21
VMP1-203ENST00000586245 SGK2Q9HBY8 427 aa13.71□□□□□ -0.21
VMP1-203ENST00000586245 UTP11Q9Y3A2 253 aaKnown RBP13.71□□□□□ -0.21
VMP1-203ENST00000586245 IGHV1OR15-9A0A0B4J2B8 117 aa13.7□□□□□ -0.22
VMP1-203ENST00000586245 LOC285095A0A1B0GVY8 99 aa13.7□□□□□ -0.22
VMP1-203ENST00000586245 LRRC72A6NJI9 287 aa13.7□□□□□ -0.22
VMP1-203ENST00000586245 EFCAB8A8MWE9 144 aa13.7□□□□□ -0.22
VMP1-203ENST00000586245 ANKRD66B4E2M5 251 aa13.7□□□□□ -0.22
VMP1-203ENST00000586245 AGTP01019 485 aa13.7□□□□□ -0.22
VMP1-203ENST00000586245 PRLP01236 227 aa13.7□□□□□ -0.22
VMP1-203ENST00000586245 FGF1P05230 155 aa13.7□□□□□ -0.22
VMP1-203ENST00000586245 SP9P0CG40 484 aa13.7□□□□□ -0.22
VMP1-203ENST00000586245 CD6P30203 668 aa13.7□□□□□ -0.22
VMP1-203ENST00000586245 ABL2P42684 1182 aa13.7□□□□□ -0.22
VMP1-203ENST00000586245 MRPS25P82663 173 aaKnown RBP13.7□□□□□ -0.22
VMP1-203ENST00000586245 CDK16Q00536 496 aa13.7□□□□□ -0.22
VMP1-203ENST00000586245 SPARCL1Q14515 664 aa13.7□□□□□ -0.22
VMP1-203ENST00000586245 SLC1A5Q15758 541 aa13.7□□□□□ -0.22
VMP1-203ENST00000586245 LRRC73Q5JTD7 316 aa13.7□□□□□ -0.22
VMP1-203ENST00000586245 PIP5KL1Q5T9C9 394 aa13.7□□□□□ -0.22
VMP1-203ENST00000586245 KCTD11Q693B1 232 aa13.7□□□□□ -0.22
VMP1-203ENST00000586245 SLC36A4Q6YBV0 504 aa13.7□□□□□ -0.22
VMP1-203ENST00000586245 PPP1R21Q6ZMI0 780 aa13.7□□□□□ -0.22
VMP1-203ENST00000586245 PCGF5Q86SE9 256 aa13.7□□□□□ -0.22
VMP1-203ENST00000586245 SLC25A41Q8N5S1 370 aa13.7□□□□□ -0.22
VMP1-203ENST00000586245 RLN3Q8WXF3 142 aa13.7□□□□□ -0.22
VMP1-203ENST00000586245 FAM131CQ96AQ9 280 aa13.7□□□□□ -0.22
VMP1-203ENST00000586245 TRIB3Q96RU7 358 aa13.7□□□□□ -0.22
VMP1-203ENST00000586245 PRRX2Q99811 253 aa13.7□□□□□ -0.22
VMP1-203ENST00000586245 RAB17Q9H0T7 212 aa13.7□□□□□ -0.22
VMP1-203ENST00000586245 KDM4CQ9H3R0 1056 aa13.7□□□□□ -0.22
VMP1-203ENST00000586245 PCDH12Q9NPG4 1184 aa13.7□□□□□ -0.22
VMP1-203ENST00000586245 CD93Q9NPY3 652 aa13.7□□□□□ -0.22
VMP1-203ENST00000586245 EIF2B3Q9NR50 452 aaKnown RBP13.7□□□□□ -0.22
VMP1-203ENST00000586245 PPIL1Q9Y3C6 166 aa13.7□□□□□ -0.22
VMP1-203ENST00000586245 FAM47DPA6NHR8 397 aa13.69□□□□□ -0.22
VMP1-203ENST00000586245 DNALI1O14645 258 aaPredicted RBP13.69□□□□□ -0.22
VMP1-203ENST00000586245 RIOK3O14730 519 aaKnown RBP13.69□□□□□ -0.22
VMP1-203ENST00000586245 NDC80O14777 642 aa13.69□□□□□ -0.22
VMP1-203ENST00000586245 MAP3K13O43283 966 aa13.69□□□□□ -0.22
VMP1-203ENST00000586245 PLRG1O43660 514 aaKnown RBP13.69□□□□□ -0.22
VMP1-203ENST00000586245 AP1G1O43747 822 aa13.69□□□□□ -0.22
VMP1-203ENST00000586245 NDUFS2O75306 463 aa13.69□□□□□ -0.22
VMP1-203ENST00000586245 USP12O75317 370 aa13.69□□□□□ -0.22
VMP1-203ENST00000586245 SUN1O94901 812 aa13.69□□□□□ -0.22
VMP1-203ENST00000586245 SEMA4FO95754 770 aa13.69□□□□□ -0.22
VMP1-203ENST00000586245 PRKCGP05129 697 aa13.69□□□□□ -0.22
VMP1-203ENST00000586245 CYP2A6P11509 494 aaPredicted RBP13.69□□□□□ -0.22
VMP1-203ENST00000586245 CTPS1P17812 591 aa13.69□□□□□ -0.22
VMP1-203ENST00000586245 TPSB2P20231 275 aa13.69□□□□□ -0.22
VMP1-203ENST00000586245 ADRA1AP35348 466 aa13.69□□□□□ -0.22
VMP1-203ENST00000586245 ADPRHP54922 357 aa13.69□□□□□ -0.22
VMP1-203ENST00000586245 FAM193AP78312 1265 aa13.69□□□□□ -0.22
VMP1-203ENST00000586245 SARNPP82979 210 aaKnown RBP13.69□□□□□ -0.22
VMP1-203ENST00000586245 TPSAB1Q15661 275 aa13.69□□□□□ -0.22
VMP1-203ENST00000586245 QPCTQ16769 361 aa13.69□□□□□ -0.22
VMP1-203ENST00000586245 MAP7D1Q3KQU3 841 aa13.69□□□□□ -0.22
VMP1-203ENST00000586245 GLE1Q53GS7 698 aaKnown RBP13.69□□□□□ -0.22
VMP1-203ENST00000586245 SIRPB2Q5JXA9 342 aa13.69□□□□□ -0.22
VMP1-203ENST00000586245 IZUMO3Q5VZ72 239 aa13.69□□□□□ -0.22
VMP1-203ENST00000586245 RANBP10Q6VN20 620 aa13.69□□□□□ -0.22
VMP1-203ENST00000586245 PPIL6Q8IXY8 311 aa13.69□□□□□ -0.22
VMP1-203ENST00000586245 DNAAF3Q8N9W5 541 aa13.69□□□□□ -0.22
VMP1-203ENST00000586245 NOA1Q8NC60 698 aaKnown RBP13.69□□□□□ -0.22
VMP1-203ENST00000586245 CPT1BQ92523 772 aa13.69□□□□□ -0.22
VMP1-203ENST00000586245 SCRN2Q96FV2 425 aa13.69□□□□□ -0.22
VMP1-203ENST00000586245 TOE1Q96GM8 510 aaKnown RBP13.69□□□□□ -0.22
VMP1-203ENST00000586245 SRPK1Q96SB4 655 aaKnown RBP13.69□□□□□ -0.22
VMP1-203ENST00000586245 APOL2Q9BQE5 337 aa13.69□□□□□ -0.22
VMP1-203ENST00000586245 ERP44Q9BS26 406 aa13.69□□□□□ -0.22
VMP1-203ENST00000586245 LRRC1Q9BTT6 524 aa13.69□□□□□ -0.22
VMP1-203ENST00000586245 TRIM31Q9BZY9 425 aa13.69□□□□□ -0.22
VMP1-203ENST00000586245 PREBQ9HCU5 417 aa13.69□□□□□ -0.22
VMP1-203ENST00000586245 ZSCAN32Q9NX65 697 aa13.69□□□□□ -0.22
VMP1-203ENST00000586245 WSB2Q9NYS7 404 aaPredicted RBP13.69□□□□□ -0.22
VMP1-203ENST00000586245 TPX2Q9ULW0 747 aaKnown RBP13.69□□□□□ -0.22
VMP1-203ENST00000586245 INVSQ9Y283 1065 aa13.69□□□□□ -0.22
VMP1-203ENST00000586245 FADS3Q9Y5Q0 445 aa13.69□□□□□ -0.22
VMP1-203ENST00000586245 KMT2EQ8IZD2 1858 aa13.69□□□□□ -0.22
VMP1-203ENST00000586245 ANKRD36A6QL64 1941 aa13.68□□□□□ -0.22
VMP1-203ENST00000586245 TBC1D3DA0A087WVF3 549 aa13.68□□□□□ -0.22
VMP1-203ENST00000586245 TBC1D3IA0A087WXS9 549 aa13.68□□□□□ -0.22
VMP1-203ENST00000586245 TBC1D3EA0A087X179 549 aa13.68□□□□□ -0.22
VMP1-203ENST00000586245 TBC1D3KA0A087X1G2 549 aa13.68□□□□□ -0.22
VMP1-203ENST00000586245 A0A0J9YYE9 177 aa13.68□□□□□ -0.22
VMP1-203ENST00000586245 TBC1D3FA6NER0 549 aaPredicted RBP13.68□□□□□ -0.22
VMP1-203ENST00000586245 CAPN8A6NHC0 703 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms