RNA–Protein interactions for RNA: ENST00000585961.1

CLPTM1-204, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-204ENST00000585961 SYCP1Q15431 976 aa20.28■□□□□ 0.84
CLPTM1-204ENST00000585961 UGP2Q16851 508 aa20.28■□□□□ 0.84
CLPTM1-204ENST00000585961 INO80CQ6PI98 192 aaPredicted RBP20.28■□□□□ 0.84
CLPTM1-204ENST00000585961 CCDC81Q6ZN84 652 aa20.28■□□□□ 0.84
CLPTM1-204ENST00000585961 PHF13Q86YI8 300 aaPredicted RBP20.28■□□□□ 0.84
CLPTM1-204ENST00000585961 SFTPA2Q8IWL1 248 aa20.28■□□□□ 0.84
CLPTM1-204ENST00000585961 PLA2G15Q8NCC3 412 aa20.28■□□□□ 0.84
CLPTM1-204ENST00000585961 CASKIN2Q8WXE0 1202 aa20.28■□□□□ 0.84
CLPTM1-204ENST00000585961 CCDC97Q96F63 343 aaPredicted RBP20.28■□□□□ 0.84
CLPTM1-204ENST00000585961 TBATAQ96M53 351 aa20.28■□□□□ 0.84
CLPTM1-204ENST00000585961 CATSPERBQ9H7T0 1116 aa20.28■□□□□ 0.84
CLPTM1-204ENST00000585961 UBA2Q9UBT2 640 aaPredicted RBP20.28■□□□□ 0.84
CLPTM1-204ENST00000585961 SIK3Q9Y2K2 1263 aa20.28■□□□□ 0.84
CLPTM1-204ENST00000585961 ZNF462Q96JM2 2506 aa20.27■□□□□ 0.84
CLPTM1-204ENST00000585961 TOR1BO14657 336 aa20.27■□□□□ 0.84
CLPTM1-204ENST00000585961 RIOK3O14730 519 aaKnown RBP20.27■□□□□ 0.84
CLPTM1-204ENST00000585961 RASGRP1O95267 797 aa20.27■□□□□ 0.84
CLPTM1-204ENST00000585961 TNFP01375 233 aa20.27■□□□□ 0.84
CLPTM1-204ENST00000585961 CALB1P05937 261 aa20.27■□□□□ 0.84
CLPTM1-204ENST00000585961 ALPIP09923 528 aa20.27■□□□□ 0.84
CLPTM1-204ENST00000585961 HTR1BP28222 390 aa20.27■□□□□ 0.84
CLPTM1-204ENST00000585961 ZNF143P52747 638 aaPredicted RBP20.27■□□□□ 0.84
CLPTM1-204ENST00000585961 ELP6Q0PNE2 266 aa20.27■□□□□ 0.84
CLPTM1-204ENST00000585961 NFATC4Q14934 902 aa20.27■□□□□ 0.84
CLPTM1-204ENST00000585961 CFAP58Q5T655 872 aa20.27■□□□□ 0.84
CLPTM1-204ENST00000585961 DNAJC24Q6P3W2 148 aa20.27■□□□□ 0.84
CLPTM1-204ENST00000585961 ZSWIM9Q86XI8 627 aa20.27■□□□□ 0.84
CLPTM1-204ENST00000585961 GKN2Q86XP6 184 aa20.27■□□□□ 0.84
CLPTM1-204ENST00000585961 FSTL5Q8N475 847 aaPredicted RBP20.27■□□□□ 0.84
CLPTM1-204ENST00000585961 ARL10Q8N8L6 244 aa20.27■□□□□ 0.84
CLPTM1-204ENST00000585961 WBP1Q96G27 269 aa20.27■□□□□ 0.84
CLPTM1-204ENST00000585961 MCEEQ96PE7 176 aa20.27■□□□□ 0.84
CLPTM1-204ENST00000585961 GFM1Q96RP9 751 aaKnown RBP20.27■□□□□ 0.84
CLPTM1-204ENST00000585961 KLQ9UEF7 1012 aa20.27■□□□□ 0.84
CLPTM1-204ENST00000585961 SSUH2Q9Y2M2 353 aa20.27■□□□□ 0.84
CLPTM1-204ENST00000585961 FLNBO75369 2602 aaKnown RBP20.27■□□□□ 0.84
CLPTM1-204ENST00000585961 A0A1W2PQM1 296 aa20.26■□□□□ 0.83
CLPTM1-204ENST00000585961 RPLP0P05388 317 aaKnown RBP20.26■□□□□ 0.83
CLPTM1-204ENST00000585961 SLC5A2P31639 672 aa20.26■□□□□ 0.83
CLPTM1-204ENST00000585961 RGRP47804 291 aa20.26■□□□□ 0.83
CLPTM1-204ENST00000585961 SRSF6Q13247 344 aaKnown RBP20.26■□□□□ 0.83
CLPTM1-204ENST00000585961 TGIF1Q15583 401 aa20.26■□□□□ 0.83
CLPTM1-204ENST00000585961 PARP15Q460N3 678 aa20.26■□□□□ 0.83
CLPTM1-204ENST00000585961 CDKAL1Q5VV42 579 aa20.26■□□□□ 0.83
CLPTM1-204ENST00000585961 LVRNQ6Q4G3 990 aa20.26■□□□□ 0.83
CLPTM1-204ENST00000585961 RAB11FIP2Q7L804 512 aa20.26■□□□□ 0.83
CLPTM1-204ENST00000585961 DNAAF5Q86Y56 855 aa20.26■□□□□ 0.83
CLPTM1-204ENST00000585961 UMODL1-AS1Q8N2C9 162 aa20.26■□□□□ 0.83
CLPTM1-204ENST00000585961 C3orf20Q8ND61 904 aa20.26■□□□□ 0.83
CLPTM1-204ENST00000585961 WDR48Q8TAF3 677 aa20.26■□□□□ 0.83
CLPTM1-204ENST00000585961 AGPAT1Q99943 283 aa20.26■□□□□ 0.83
CLPTM1-204ENST00000585961 SLC39A8Q9C0K1 460 aa20.26■□□□□ 0.83
CLPTM1-204ENST00000585961 LRRN3Q9H3W5 708 aa20.26■□□□□ 0.83
CLPTM1-204ENST00000585961 MRPL40Q9NQ50 206 aaKnown RBP20.26■□□□□ 0.83
CLPTM1-204ENST00000585961 ATXN7L1Q9ULK2 861 aaPredicted RBP20.26■□□□□ 0.83
CLPTM1-204ENST00000585961 TCRBV5S1A1TA0A578 114 aa20.25■□□□□ 0.83
CLPTM1-204ENST00000585961 CAPN8A6NHC0 703 aa20.25■□□□□ 0.83
CLPTM1-204ENST00000585961 WASH4PA8MWX3 477 aa20.25■□□□□ 0.83
CLPTM1-204ENST00000585961 PLD2O14939 933 aa20.25■□□□□ 0.83
CLPTM1-204ENST00000585961 UGT1A5P35504 534 aa20.25■□□□□ 0.83
CLPTM1-204ENST00000585961 PAPOLAP51003 745 aaKnown RBP20.25■□□□□ 0.83
CLPTM1-204ENST00000585961 COPB1P53618 953 aaKnown RBP20.25■□□□□ 0.83
CLPTM1-204ENST00000585961 INHBCP55103 352 aa20.25■□□□□ 0.83
CLPTM1-204ENST00000585961 OGDHQ02218 1023 aa20.25■□□□□ 0.83
CLPTM1-204ENST00000585961 CT47A1Q5JQC4 288 aaPredicted RBP20.25■□□□□ 0.83
CLPTM1-204ENST00000585961 ERAP2Q6P179 960 aa20.25■□□□□ 0.83
CLPTM1-204ENST00000585961 DCUN1D2Q6PH85 259 aa20.25■□□□□ 0.83
CLPTM1-204ENST00000585961 MON1BQ7L1V2 547 aa20.25■□□□□ 0.83
CLPTM1-204ENST00000585961 TAF8Q7Z7C8 310 aa20.25■□□□□ 0.83
CLPTM1-204ENST00000585961 CLEC14AQ86T13 490 aa20.25■□□□□ 0.83
CLPTM1-204ENST00000585961 SRLQ86TD4 932 aa20.25■□□□□ 0.83
CLPTM1-204ENST00000585961 PAF1Q8N7H5 531 aa20.25■□□□□ 0.83
CLPTM1-204ENST00000585961 TSEN2Q8NCE0 465 aaKnown RBP20.25■□□□□ 0.83
CLPTM1-204ENST00000585961 FAM46DQ8NEK8 389 aa20.25■□□□□ 0.83
CLPTM1-204ENST00000585961 NEK11Q8NG66 645 aa20.25■□□□□ 0.83
CLPTM1-204ENST00000585961 OR1E3Q8WZA6 343 aa20.25■□□□□ 0.83
CLPTM1-204ENST00000585961 CCNL2Q96S94 520 aaPredicted RBP20.25■□□□□ 0.83
CLPTM1-204ENST00000585961 CNPY3Q9BT09 278 aa20.25■□□□□ 0.83
CLPTM1-204ENST00000585961 LRRC19Q9H756 370 aa20.25■□□□□ 0.83
CLPTM1-204ENST00000585961 MOSPD1Q9UJG1 213 aa20.25■□□□□ 0.83
CLPTM1-204ENST00000585961 TTC24A2A3L6 582 aaPredicted RBP20.24■□□□□ 0.83
CLPTM1-204ENST00000585961 ANKRD62A6NC57 917 aa20.24■□□□□ 0.83
CLPTM1-204ENST00000585961 TMEM202A6NGA9 273 aa20.24■□□□□ 0.83
CLPTM1-204ENST00000585961 PALMO75781 387 aa20.24■□□□□ 0.83
CLPTM1-204ENST00000585961 SUOXP51687 545 aa20.24■□□□□ 0.83
CLPTM1-204ENST00000585961 TPI1P60174 286 aa20.24■□□□□ 0.83
CLPTM1-204ENST00000585961 UBXN1Q04323 297 aa20.24■□□□□ 0.83
CLPTM1-204ENST00000585961 CA9Q16790 459 aa20.24■□□□□ 0.83
CLPTM1-204ENST00000585961 HCAR2Q8TDS4 363 aa20.24■□□□□ 0.83
CLPTM1-204ENST00000585961 SNRNP27Q8WVK2 155 aaKnown RBP20.24■□□□□ 0.83
CLPTM1-204ENST00000585961 FUBP1Q96AE4 644 aaKnown RBP20.24■□□□□ 0.83
CLPTM1-204ENST00000585961 WDR92Q96MX6 357 aa20.24■□□□□ 0.83
CLPTM1-204ENST00000585961 ZNF641Q96N77 438 aaPredicted RBP20.24■□□□□ 0.83
CLPTM1-204ENST00000585961 STRADBQ9C0K7 418 aa20.24■□□□□ 0.83
CLPTM1-204ENST00000585961 SUDS3Q9H7L9 328 aaPredicted RBP20.24■□□□□ 0.83
CLPTM1-204ENST00000585961 PISDQ9UG56 409 aa20.24■□□□□ 0.83
CLPTM1-204ENST00000585961 PCSK1NQ9UHG2 260 aa20.24■□□□□ 0.83
CLPTM1-204ENST00000585961 ATP8A1Q9Y2Q0 1164 aa20.24■□□□□ 0.83
CLPTM1-204ENST00000585961 TMCO5BA8MYB1 307 aa20.23■□□□□ 0.83
CLPTM1-204ENST00000585961 B8ZZF3 427 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms