RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 TDRPQ86YL5 185 aa12.76□□□□□ -0.37
VMP1-202ENST00000585847 ZBED8Q8IZ13 594 aa12.76□□□□□ -0.37
VMP1-202ENST00000585847 CHPFQ8IZ52 775 aa12.76□□□□□ -0.37
VMP1-202ENST00000585847 KRT222Q8N1A0 295 aa12.76□□□□□ -0.37
VMP1-202ENST00000585847 PGBD5Q8N414 524 aa12.76□□□□□ -0.37
VMP1-202ENST00000585847 SPEM1Q8N4L4 309 aa12.76□□□□□ -0.37
VMP1-202ENST00000585847 ISG20Q96AZ6 181 aaKnown RBP12.76□□□□□ -0.37
VMP1-202ENST00000585847 ERLEC1Q96DZ1 483 aa12.76□□□□□ -0.37
VMP1-202ENST00000585847 PGM2Q96G03 612 aa12.76□□□□□ -0.37
VMP1-202ENST00000585847 AGAP3Q96P47 875 aa12.76□□□□□ -0.37
VMP1-202ENST00000585847 C19orf43Q9BQ61 176 aa12.76□□□□□ -0.37
VMP1-202ENST00000585847 FSD1LQ9BXM9 530 aa12.76□□□□□ -0.37
VMP1-202ENST00000585847 CASS4Q9NQ75 786 aa12.76□□□□□ -0.37
VMP1-202ENST00000585847 PRSS16Q9NQE7 514 aa12.76□□□□□ -0.37
VMP1-202ENST00000585847 NINJ2Q9NZG7 142 aa12.76□□□□□ -0.37
VMP1-202ENST00000585847 OGFRQ9NZT2 677 aa12.76□□□□□ -0.37
VMP1-202ENST00000585847 SAMD15Q9P1V8 674 aa12.76□□□□□ -0.37
VMP1-202ENST00000585847 SLC24A2Q9UI40 661 aa12.76□□□□□ -0.37
VMP1-202ENST00000585847 SLC25A13Q9UJS0 675 aa12.76□□□□□ -0.37
VMP1-202ENST00000585847 PLA2G4CQ9UP65 541 aa12.76□□□□□ -0.37
VMP1-202ENST00000585847 TEX264Q9Y6I9 313 aa12.76□□□□□ -0.37
VMP1-202ENST00000585847 ZNF292O60281 2723 aa12.76□□□□□ -0.37
VMP1-202ENST00000585847 A6NNZ2 444 aa12.75□□□□□ -0.37
VMP1-202ENST00000585847 K7ESF4 209 aa12.75□□□□□ -0.37
VMP1-202ENST00000585847 SIN3BO75182 1162 aa12.75□□□□□ -0.37
VMP1-202ENST00000585847 CDH16O75309 829 aa12.75□□□□□ -0.37
VMP1-202ENST00000585847 GJB3O75712 270 aa12.75□□□□□ -0.37
VMP1-202ENST00000585847 SASH3O75995 380 aa12.75□□□□□ -0.37
VMP1-202ENST00000585847 HLA-DQB2P05538 268 aa12.75□□□□□ -0.37
VMP1-202ENST00000585847 HOXB2P14652 356 aa12.75□□□□□ -0.37
VMP1-202ENST00000585847 PGAM1P18669 254 aa12.75□□□□□ -0.37
VMP1-202ENST00000585847 HLA-DPA1P20036 260 aa12.75□□□□□ -0.37
VMP1-202ENST00000585847 COPAP53621 1224 aa12.75□□□□□ -0.37
VMP1-202ENST00000585847 RPL26P61254 145 aaKnown RBP12.75□□□□□ -0.37
VMP1-202ENST00000585847 CAMK2GQ13555 558 aaPredicted RBP12.75□□□□□ -0.37
VMP1-202ENST00000585847 IHHQ14623 411 aa12.75□□□□□ -0.37
VMP1-202ENST00000585847 UAP1Q16222 522 aaPredicted RBP12.75□□□□□ -0.37
VMP1-202ENST00000585847 CRY1Q16526 586 aa12.75□□□□□ -0.37
VMP1-202ENST00000585847 TUBB8Q3ZCM7 444 aa12.75□□□□□ -0.37
VMP1-202ENST00000585847 EOGTQ5NDL2 527 aa12.75□□□□□ -0.37
VMP1-202ENST00000585847 ANKRD22Q5VYY1 191 aa12.75□□□□□ -0.37
VMP1-202ENST00000585847 SERPINA13PQ6UXR4 307 aa12.75□□□□□ -0.37
VMP1-202ENST00000585847 Q6ZVU0 165 aa12.75□□□□□ -0.37
VMP1-202ENST00000585847 PALM2Q8IXS6 379 aa12.75□□□□□ -0.37
VMP1-202ENST00000585847 PLPP6Q8IY26 295 aa12.75□□□□□ -0.37
VMP1-202ENST00000585847 KIAA2013Q8IYS2 634 aa12.75□□□□□ -0.37
VMP1-202ENST00000585847 CNTD1Q8N815 330 aa12.75□□□□□ -0.37
VMP1-202ENST00000585847 PDCD7Q8N8D1 485 aaKnown RBP12.75□□□□□ -0.37
VMP1-202ENST00000585847 CHST14Q8NCH0 376 aa12.75□□□□□ -0.37
VMP1-202ENST00000585847 TADA1Q96BN2 335 aa12.75□□□□□ -0.37
VMP1-202ENST00000585847 STAMBPL1Q96FJ0 436 aa12.75□□□□□ -0.37
VMP1-202ENST00000585847 FEM1CQ96JP0 617 aa12.75□□□□□ -0.37
VMP1-202ENST00000585847 FAM129BQ96TA1 746 aa12.75□□□□□ -0.37
VMP1-202ENST00000585847 CYTH2Q99418 400 aa12.75□□□□□ -0.37
VMP1-202ENST00000585847 EBNA1BP2Q99848 306 aaKnown RBP12.75□□□□□ -0.37
VMP1-202ENST00000585847 IER2Q9BTL4 223 aa12.75□□□□□ -0.37
VMP1-202ENST00000585847 TNKS2Q9H2K2 1166 aa12.75□□□□□ -0.37
VMP1-202ENST00000585847 MRM3Q9HC36 420 aaKnown RBP12.75□□□□□ -0.37
VMP1-202ENST00000585847 FAM53CQ9NYF3 392 aa12.75□□□□□ -0.37
VMP1-202ENST00000585847 SENP1Q9P0U3 644 aa12.75□□□□□ -0.37
VMP1-202ENST00000585847 RPL26L1Q9UNX3 145 aaKnown RBP12.75□□□□□ -0.37
VMP1-202ENST00000585847 SLC8A2Q9UPR5 921 aa12.75□□□□□ -0.37
VMP1-202ENST00000585847 PLAAQ9Y263 795 aa12.75□□□□□ -0.37
VMP1-202ENST00000585847 R4GN57 208 aa12.75□□□□□ -0.37
VMP1-202ENST00000585847 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.74□□□□□ -0.37
VMP1-202ENST00000585847 PAPSS2O95340 614 aaPredicted RBP12.74□□□□□ -0.37
VMP1-202ENST00000585847 FGF1P05230 155 aa12.74□□□□□ -0.37
VMP1-202ENST00000585847 POLBP06746 335 aa12.74□□□□□ -0.37
VMP1-202ENST00000585847 EPHX1P07099 455 aa12.74□□□□□ -0.37
VMP1-202ENST00000585847 CTSLP07711 333 aa12.74□□□□□ -0.37
VMP1-202ENST00000585847 CR2P20023 1033 aa12.74□□□□□ -0.37
VMP1-202ENST00000585847 NFKBIAP25963 317 aa12.74□□□□□ -0.37
VMP1-202ENST00000585847 CD68P34810 354 aaPredicted RBP12.74□□□□□ -0.37
VMP1-202ENST00000585847 NRLP54845 237 aa12.74□□□□□ -0.37
VMP1-202ENST00000585847 SLC29A2Q14542 456 aa12.74□□□□□ -0.37
VMP1-202ENST00000585847 BBS9Q3SYG4 887 aa12.74□□□□□ -0.37
VMP1-202ENST00000585847 TRMT11Q7Z4G4 463 aaKnown RBP12.74□□□□□ -0.37
VMP1-202ENST00000585847 CAND1Q86VP6 1230 aaKnown RBP12.74□□□□□ -0.37
VMP1-202ENST00000585847 STK40Q8N2I9 435 aa12.74□□□□□ -0.37
VMP1-202ENST00000585847 ARFGAP2Q8N6H7 521 aa12.74□□□□□ -0.37
VMP1-202ENST00000585847 DNAAF3Q8N9W5 541 aa12.74□□□□□ -0.37
VMP1-202ENST00000585847 TSEN2Q8NCE0 465 aaKnown RBP12.74□□□□□ -0.37
VMP1-202ENST00000585847 OR2A12Q8NGT7 310 aa12.74□□□□□ -0.37
VMP1-202ENST00000585847 GSDMBQ8TAX9 411 aa12.74□□□□□ -0.37
VMP1-202ENST00000585847 SCG3Q8WXD2 468 aaKnown RBP12.74□□□□□ -0.37
VMP1-202ENST00000585847 CDKL2Q92772 493 aa12.74□□□□□ -0.37
VMP1-202ENST00000585847 ZIM3Q96PE6 472 aa12.74□□□□□ -0.37
VMP1-202ENST00000585847 NUDCD1Q96RS6 583 aa12.74□□□□□ -0.37
VMP1-202ENST00000585847 TBL1YQ9BQ87 522 aa12.74□□□□□ -0.37
VMP1-202ENST00000585847 SLC6A17Q9H1V8 727 aa12.74□□□□□ -0.37
VMP1-202ENST00000585847 ACSS3Q9H6R3 686 aa12.74□□□□□ -0.37
VMP1-202ENST00000585847 PRMT8Q9NR22 394 aaPredicted RBP12.74□□□□□ -0.37
VMP1-202ENST00000585847 NSMCE4AQ9NXX6 385 aa12.74□□□□□ -0.37
VMP1-202ENST00000585847 ZC3H7BQ9UGR2 993 aaKnown RBP12.74□□□□□ -0.37
VMP1-202ENST00000585847 SUN2Q9UH99 717 aa12.74□□□□□ -0.37
VMP1-202ENST00000585847 RIMKLBQ9ULI2 386 aa12.74□□□□□ -0.37
VMP1-202ENST00000585847 EDDM13A0A1B0GTR0 161 aa12.73□□□□□ -0.37
VMP1-202ENST00000585847 FAM237BA0A1B0GVD1 139 aa12.73□□□□□ -0.37
VMP1-202ENST00000585847 TTC24A2A3L6 582 aaPredicted RBP12.73□□□□□ -0.37
VMP1-202ENST00000585847 INSIG1O15503 277 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms