RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 DPYSL3Q14195 570 aa18.15■□□□□ 0.5
SRSF1-208ENST00000584773 ZNF235Q14590 738 aa18.15■□□□□ 0.5
SRSF1-208ENST00000584773 RFTN1Q14699 578 aaPredicted RBP18.15■□□□□ 0.5
SRSF1-208ENST00000584773 GRM3Q14832 879 aa18.15■□□□□ 0.5
SRSF1-208ENST00000584773 TCEA2Q15560 299 aa18.15■□□□□ 0.5
SRSF1-208ENST00000584773 SLC18A3Q16572 532 aa18.15■□□□□ 0.5
SRSF1-208ENST00000584773 BRAT1Q6PJG6 821 aa18.15■□□□□ 0.5
SRSF1-208ENST00000584773 PROSER1Q86XN7 944 aa18.15■□□□□ 0.5
SRSF1-208ENST00000584773 ATPAF2Q8N5M1 289 aa18.15■□□□□ 0.5
SRSF1-208ENST00000584773 OR8K1Q8NGG5 319 aa18.15■□□□□ 0.5
SRSF1-208ENST00000584773 LMX1AQ8TE12 382 aa18.15■□□□□ 0.5
SRSF1-208ENST00000584773 ECHDC3Q96DC8 303 aa18.15■□□□□ 0.5
SRSF1-208ENST00000584773 PSKH2Q96QS6 385 aa18.15■□□□□ 0.5
SRSF1-208ENST00000584773 CCDC86Q9H6F5 360 aaKnown RBP18.15■□□□□ 0.5
SRSF1-208ENST00000584773 SPTLC3Q9NUV7 552 aa18.15■□□□□ 0.5
SRSF1-208ENST00000584773 U3KQA8 63 aa18.15■□□□□ 0.5
SRSF1-208ENST00000584773 PKD1L2Q7Z442 2459 aa18.14■□□□□ 0.49
SRSF1-208ENST00000584773 LRP4O75096 1905 aa18.14■□□□□ 0.49
SRSF1-208ENST00000584773 SCAMP1O15126 338 aa18.14■□□□□ 0.49
SRSF1-208ENST00000584773 PROSCO94903 275 aa18.14■□□□□ 0.49
SRSF1-208ENST00000584773 PCCBP05166 539 aa18.14■□□□□ 0.49
SRSF1-208ENST00000584773 ACP1P24666 158 aa18.14■□□□□ 0.49
SRSF1-208ENST00000584773 THOP1P52888 689 aa18.14■□□□□ 0.49
SRSF1-208ENST00000584773 CYP4F3Q08477 520 aa18.14■□□□□ 0.49
SRSF1-208ENST00000584773 PTPRRQ15256 657 aa18.14■□□□□ 0.49
SRSF1-208ENST00000584773 DEFB133Q30KQ1 61 aa18.14■□□□□ 0.49
SRSF1-208ENST00000584773 KCTD16Q68DU8 428 aa18.14■□□□□ 0.49
SRSF1-208ENST00000584773 ERAP2Q6P179 960 aa18.14■□□□□ 0.49
SRSF1-208ENST00000584773 TMPRSS12Q86WS5 348 aa18.14■□□□□ 0.49
SRSF1-208ENST00000584773 PAF1Q8N7H5 531 aa18.14■□□□□ 0.49
SRSF1-208ENST00000584773 HCAR2Q8TDS4 363 aa18.14■□□□□ 0.49
SRSF1-208ENST00000584773 CTNNBL1Q8WYA6 563 aaPredicted RBP18.14■□□□□ 0.49
SRSF1-208ENST00000584773 APOLD1Q96LR9 279 aa18.14■□□□□ 0.49
SRSF1-208ENST00000584773 DEF6Q9H4E7 631 aa18.14■□□□□ 0.49
SRSF1-208ENST00000584773 ABHD10Q9NUJ1 306 aa18.14■□□□□ 0.49
SRSF1-208ENST00000584773 NLGN3Q9NZ94 848 aa18.14■□□□□ 0.49
SRSF1-208ENST00000584773 OR1A2Q9Y585 309 aa18.14■□□□□ 0.49
SRSF1-208ENST00000584773 PCDHGC4Q9Y5F7 938 aa18.14■□□□□ 0.49
SRSF1-208ENST00000584773 AQP9O43315 295 aa18.13■□□□□ 0.49
SRSF1-208ENST00000584773 LZTS3O60299 673 aaPredicted RBP18.13■□□□□ 0.49
SRSF1-208ENST00000584773 MFAP3LO75121 409 aa18.13■□□□□ 0.49
SRSF1-208ENST00000584773 GCATO75600 419 aa18.13■□□□□ 0.49
SRSF1-208ENST00000584773 CELA2BP08218 269 aaPredicted RBP18.13■□□□□ 0.49
SRSF1-208ENST00000584773 C1SP09871 688 aa18.13■□□□□ 0.49
SRSF1-208ENST00000584773 H2AFZP0C0S5 128 aa18.13■□□□□ 0.49
SRSF1-208ENST00000584773 JUPP14923 745 aa18.13■□□□□ 0.49
SRSF1-208ENST00000584773 GM2AP17900 193 aa18.13■□□□□ 0.49
SRSF1-208ENST00000584773 CR2P20023 1033 aa18.13■□□□□ 0.49
SRSF1-208ENST00000584773 INSM1Q01101 510 aaPredicted RBP18.13■□□□□ 0.49
SRSF1-208ENST00000584773 NSUN2Q08J23 767 aaKnown RBP eCLIP18.13■□□□□ 0.49
SRSF1-208ENST00000584773 TARDBPQ13148 414 aaKnown RBP eCLIP18.13■□□□□ 0.49
SRSF1-208ENST00000584773 LRRC14Q15048 493 aa18.13■□□□□ 0.49
SRSF1-208ENST00000584773 HADHQ16836 314 aaKnown RBP18.13■□□□□ 0.49
SRSF1-208ENST00000584773 NCBP2-AS2Q69YL0 99 aa18.13■□□□□ 0.49
SRSF1-208ENST00000584773 H2AFVQ71UI9 128 aa18.13■□□□□ 0.49
SRSF1-208ENST00000584773 PHACTR4Q8IZ21 702 aa18.13■□□□□ 0.49
SRSF1-208ENST00000584773 PLA2G15Q8NCC3 412 aa18.13■□□□□ 0.49
SRSF1-208ENST00000584773 PCDH19Q8TAB3 1148 aa18.13■□□□□ 0.49
SRSF1-208ENST00000584773 FAM71BQ8TC56 605 aa18.13■□□□□ 0.49
SRSF1-208ENST00000584773 PDCD6IPQ8WUM4 868 aaKnown RBP18.13■□□□□ 0.49
SRSF1-208ENST00000584773 ZNF599Q96NL3 588 aa18.13■□□□□ 0.49
SRSF1-208ENST00000584773 LRRC61Q9BV99 259 aa18.13■□□□□ 0.49
SRSF1-208ENST00000584773 C1QTNF7Q9BXJ2 289 aa18.13■□□□□ 0.49
SRSF1-208ENST00000584773 NOD2Q9HC29 1040 aa18.13■□□□□ 0.49
SRSF1-208ENST00000584773 APOBEC3BQ9UH17 382 aaKnown RBP18.13■□□□□ 0.49
SRSF1-208ENST00000584773 ACACAQ13085 2346 aa18.13■□□□□ 0.49
SRSF1-208ENST00000584773 ASXL3Q9C0F0 2248 aa18.12■□□□□ 0.49
SRSF1-208ENST00000584773 H3BM21 787 aa18.12■□□□□ 0.49
SRSF1-208ENST00000584773 SUOXP51687 545 aa18.12■□□□□ 0.49
SRSF1-208ENST00000584773 AP1S1P61966 158 aa18.12■□□□□ 0.49
SRSF1-208ENST00000584773 TRAF2Q12933 501 aa18.12■□□□□ 0.49
SRSF1-208ENST00000584773 TRIM14Q14142 442 aa18.12■□□□□ 0.49
SRSF1-208ENST00000584773 INPP5AQ14642 412 aa18.12■□□□□ 0.49
SRSF1-208ENST00000584773 HS1BP3Q53T59 392 aa18.12■□□□□ 0.49
SRSF1-208ENST00000584773 FAM182AQ5T1J6 154 aa18.12■□□□□ 0.49
SRSF1-208ENST00000584773 LIPIQ6XZB0 460 aa18.12■□□□□ 0.49
SRSF1-208ENST00000584773 MACC1Q6ZN28 852 aa18.12■□□□□ 0.49
SRSF1-208ENST00000584773 PELI3Q8N2H9 469 aa18.12■□□□□ 0.49
SRSF1-208ENST00000584773 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.12■□□□□ 0.49
SRSF1-208ENST00000584773 TSACCQ96A04 125 aaPredicted RBP18.12■□□□□ 0.49
SRSF1-208ENST00000584773 MGME1Q9BQP7 344 aa18.12■□□□□ 0.49
SRSF1-208ENST00000584773 SCUBE2Q9NQ36 999 aa18.12■□□□□ 0.49
SRSF1-208ENST00000584773 UVRAGQ9P2Y5 699 aa18.12■□□□□ 0.49
SRSF1-208ENST00000584773 B4GALT6Q9UBX8 382 aa18.12■□□□□ 0.49
SRSF1-208ENST00000584773 RAXQ9Y2V3 346 aa18.12■□□□□ 0.49
SRSF1-208ENST00000584773 A0A0U1RQS6 177 aa18.11■□□□□ 0.49
SRSF1-208ENST00000584773 SSU72P8A0A1W2PR75 194 aa18.11■□□□□ 0.49
SRSF1-208ENST00000584773 CASC3O15234 703 aaKnown RBP18.11■□□□□ 0.49
SRSF1-208ENST00000584773 AKR1B10O60218 316 aa18.11■□□□□ 0.49
SRSF1-208ENST00000584773 RECQL5O94762 991 aaPredicted RBP18.11■□□□□ 0.49
SRSF1-208ENST00000584773 ALPPL2P10696 532 aa18.11■□□□□ 0.49
SRSF1-208ENST00000584773 CKMT1AP12532 417 aa18.11■□□□□ 0.49
SRSF1-208ENST00000584773 SERPINB6P35237 376 aa18.11■□□□□ 0.49
SRSF1-208ENST00000584773 RENBPP51606 427 aa18.11■□□□□ 0.49
SRSF1-208ENST00000584773 YPEL5P62699 121 aa18.11■□□□□ 0.49
SRSF1-208ENST00000584773 MESDQ14696 234 aa18.11■□□□□ 0.49
SRSF1-208ENST00000584773 ANKRD20A8PQ5CZ79 823 aa18.11■□□□□ 0.49
SRSF1-208ENST00000584773 PRRT3Q5FWE3 981 aa18.11■□□□□ 0.49
SRSF1-208ENST00000584773 DPPA4Q7L190 304 aa18.11■□□□□ 0.49
SRSF1-208ENST00000584773 KCTD6Q8NC69 237 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms