RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 KCNA5P22460 613 aa10.35□□□□□ -0.75
RFFL-212ENST00000584655 XPAP23025 273 aaPredicted RBP10.35□□□□□ -0.75
RFFL-212ENST00000584655 AKT1P31749 480 aa10.35□□□□□ -0.75
RFFL-212ENST00000584655 CD70P32970 193 aa10.35□□□□□ -0.75
RFFL-212ENST00000584655 GRIA4P48058 902 aa10.35□□□□□ -0.75
RFFL-212ENST00000584655 DDX39BQ13838 428 aaKnown RBP10.35□□□□□ -0.75
RFFL-212ENST00000584655 SH2D4BQ5SQS7 431 aa10.35□□□□□ -0.75
RFFL-212ENST00000584655 TEDDM1Q5T9Z0 273 aa10.35□□□□□ -0.75
RFFL-212ENST00000584655 GET4Q7L5D6 327 aaPredicted RBP10.35□□□□□ -0.75
RFFL-212ENST00000584655 TSPAN33Q86UF1 283 aa10.35□□□□□ -0.75
RFFL-212ENST00000584655 FLCNQ8NFG4 579 aa10.35□□□□□ -0.75
RFFL-212ENST00000584655 ANKRD49Q8WVL7 239 aa10.35□□□□□ -0.75
RFFL-212ENST00000584655 KCNA7Q96RP8 456 aa10.35□□□□□ -0.75
RFFL-212ENST00000584655 POLR1EQ9GZS1 481 aaKnown RBP10.35□□□□□ -0.75
RFFL-212ENST00000584655 GALPQ9UBC7 116 aa10.35□□□□□ -0.75
RFFL-212ENST00000584655 INSL5Q9Y5Q6 135 aa10.35□□□□□ -0.75
RFFL-212ENST00000584655 SCN10AQ9Y5Y9 1956 aa10.35□□□□□ -0.75
RFFL-212ENST00000584655 GRM6O15303 877 aa10.34□□□□□ -0.75
RFFL-212ENST00000584655 TMCC1O94876 653 aa10.34□□□□□ -0.75
RFFL-212ENST00000584655 CCR2P41597 374 aa10.34□□□□□ -0.75
RFFL-212ENST00000584655 ASPHQ12797 758 aa10.34□□□□□ -0.75
RFFL-212ENST00000584655 BOP1Q14137 746 aaKnown RBP10.34□□□□□ -0.75
RFFL-212ENST00000584655 TAZQ16635 292 aa10.34□□□□□ -0.75
RFFL-212ENST00000584655 C9orf50Q5SZB4 431 aa10.34□□□□□ -0.75
RFFL-212ENST00000584655 MILR1Q7Z6M3 343 aa10.34□□□□□ -0.75
RFFL-212ENST00000584655 SFTPA1Q8IWL2 248 aa10.34□□□□□ -0.75
RFFL-212ENST00000584655 CCT6BQ92526 530 aa10.34□□□□□ -0.75
RFFL-212ENST00000584655 NT5C3BQ969T7 300 aa10.34□□□□□ -0.75
RFFL-212ENST00000584655 PRICKLE1Q96MT3 831 aaPredicted RBP10.34□□□□□ -0.75
RFFL-212ENST00000584655 OLFM1Q99784 485 aa10.34□□□□□ -0.75
RFFL-212ENST00000584655 EGFL8Q99944 293 aa10.34□□□□□ -0.75
RFFL-212ENST00000584655 WRAP53Q9BUR4 548 aaKnown RBP10.34□□□□□ -0.75
RFFL-212ENST00000584655 EBF3Q9H4W6 596 aa10.34□□□□□ -0.75
RFFL-212ENST00000584655 POMKQ9H5K3 350 aa10.34□□□□□ -0.75
RFFL-212ENST00000584655 ZNHIT2Q9UHR6 403 aa10.34□□□□□ -0.75
RFFL-212ENST00000584655 GPR179Q6PRD1 2367 aa10.34□□□□□ -0.75
RFFL-212ENST00000584655 ZCWPW2A0A1B0GU75 182 aa10.34□□□□□ -0.75
RFFL-212ENST00000584655 FFAR3O14843 346 aa10.34□□□□□ -0.75
RFFL-212ENST00000584655 GPR42O15529 346 aa10.34□□□□□ -0.75
RFFL-212ENST00000584655 RTN3O95197 1032 aaPredicted RBP10.34□□□□□ -0.75
RFFL-212ENST00000584655 GDF5P43026 501 aa10.34□□□□□ -0.75
RFFL-212ENST00000584655 TMEM31Q5JXX7 168 aa10.34□□□□□ -0.75
RFFL-212ENST00000584655 PKN3Q6P5Z2 889 aa10.34□□□□□ -0.75
RFFL-212ENST00000584655 CYB5D1Q6P9G0 228 aa10.34□□□□□ -0.75
RFFL-212ENST00000584655 BBS5Q8N3I7 341 aa10.34□□□□□ -0.75
RFFL-212ENST00000584655 HEXDCQ8WVB3 486 aa10.34□□□□□ -0.75
RFFL-212ENST00000584655 FOXJ1Q92949 421 aa10.34□□□□□ -0.75
RFFL-212ENST00000584655 NSUN5Q96P11 429 aaKnown RBP10.34□□□□□ -0.75
RFFL-212ENST00000584655 POLR3BQ9NW08 1133 aaPredicted RBP10.34□□□□□ -0.75
RFFL-212ENST00000584655 ARID1BQ8NFD5 2236 aaPredicted RBP10.34□□□□□ -0.75
RFFL-212ENST00000584655 SYN3O14994 580 aa10.34□□□□□ -0.75
RFFL-212ENST00000584655 CYP11A1P05108 521 aa10.34□□□□□ -0.75
RFFL-212ENST00000584655 CST5P28325 142 aaPredicted RBP10.34□□□□□ -0.75
RFFL-212ENST00000584655 PFKPQ01813 784 aa10.34□□□□□ -0.75
RFFL-212ENST00000584655 HSPA14Q0VDF9 509 aa10.34□□□□□ -0.75
RFFL-212ENST00000584655 XRCC4Q13426 336 aa10.34□□□□□ -0.75
RFFL-212ENST00000584655 TRIP4Q15650 581 aaPredicted RBP10.34□□□□□ -0.75
RFFL-212ENST00000584655 ARL13AQ5H913 290 aaPredicted RBP10.34□□□□□ -0.75
RFFL-212ENST00000584655 RALGPS1Q5JS13 557 aa10.34□□□□□ -0.75
RFFL-212ENST00000584655 LYSMD3Q7Z3D4 306 aa10.34□□□□□ -0.75
RFFL-212ENST00000584655 WDR75Q8IWA0 830 aaKnown RBP10.34□□□□□ -0.75
RFFL-212ENST00000584655 ZSWIM3Q96MP5 696 aa10.34□□□□□ -0.75
RFFL-212ENST00000584655 FBRSL1Q9HCM7 1045 aaKnown RBP10.34□□□□□ -0.75
RFFL-212ENST00000584655 USH1CQ9Y6N9 552 aa10.34□□□□□ -0.75
RFFL-212ENST00000584655 LOC285556D6RIA3 1793 aa10.33□□□□□ -0.76
RFFL-212ENST00000584655 CACNA1EQ15878 2313 aa10.33□□□□□ -0.76
RFFL-212ENST00000584655 HACD1B0YJ81 288 aa10.33□□□□□ -0.76
RFFL-212ENST00000584655 STX16-NPEPL1H3BU86 382 aa10.33□□□□□ -0.76
RFFL-212ENST00000584655 TPST1O60507 370 aa10.33□□□□□ -0.76
RFFL-212ENST00000584655 GPC4O75487 556 aa10.33□□□□□ -0.76
RFFL-212ENST00000584655 CLDN7O95471 211 aa10.33□□□□□ -0.76
RFFL-212ENST00000584655 SLC2A3P11169 496 aa10.33□□□□□ -0.76
RFFL-212ENST00000584655 FGFR3P22607 806 aa10.33□□□□□ -0.76
RFFL-212ENST00000584655 IGFBP4P22692 258 aa10.33□□□□□ -0.76
RFFL-212ENST00000584655 ARRB2P32121 409 aa10.33□□□□□ -0.76
RFFL-212ENST00000584655 CD151P48509 253 aa10.33□□□□□ -0.76
RFFL-212ENST00000584655 NCALDP61601 193 aa10.33□□□□□ -0.76
RFFL-212ENST00000584655 OCRLQ01968 901 aa10.33□□□□□ -0.76
RFFL-212ENST00000584655 SLC20A2Q08357 652 aa10.33□□□□□ -0.76
RFFL-212ENST00000584655 GALNTL6Q49A17 601 aa10.33□□□□□ -0.76
RFFL-212ENST00000584655 DNAJC14Q6Y2X3 702 aaPredicted RBP10.33□□□□□ -0.76
RFFL-212ENST00000584655 ATG14Q6ZNE5 492 aa10.33□□□□□ -0.76
RFFL-212ENST00000584655 PHTF2Q8N3S3 785 aa10.33□□□□□ -0.76
RFFL-212ENST00000584655 TMEM199Q8N511 208 aa10.33□□□□□ -0.76
RFFL-212ENST00000584655 SCAMP4Q969E2 229 aa10.33□□□□□ -0.76
RFFL-212ENST00000584655 TOP1MTQ969P6 601 aa10.33□□□□□ -0.76
RFFL-212ENST00000584655 GATA5Q9BWX5 397 aaPredicted RBP10.33□□□□□ -0.76
RFFL-212ENST00000584655 IL22Q9GZX6 179 aa10.33□□□□□ -0.76
RFFL-212ENST00000584655 APOBEC2Q9Y235 224 aaKnown RBP10.33□□□□□ -0.76
RFFL-212ENST00000584655 MRPS23Q9Y3D9 190 aaKnown RBP10.33□□□□□ -0.76
RFFL-212ENST00000584655 OR2AG2A6NM03 316 aa10.33□□□□□ -0.76
RFFL-212ENST00000584655 BHMG1C9JSJ3 638 aaPredicted RBP10.33□□□□□ -0.76
RFFL-212ENST00000584655 UBXN8O00124 270 aa10.33□□□□□ -0.76
RFFL-212ENST00000584655 BTN3A1O00481 513 aa10.33□□□□□ -0.76
RFFL-212ENST00000584655 EFNA1P20827 205 aaPredicted RBP10.33□□□□□ -0.76
RFFL-212ENST00000584655 MESP2Q0VG99 397 aa10.33□□□□□ -0.76
RFFL-212ENST00000584655 GRM2Q14416 872 aa10.33□□□□□ -0.76
RFFL-212ENST00000584655 KIF19Q2TAC6 998 aa10.33□□□□□ -0.76
RFFL-212ENST00000584655 SNX30Q5VWJ9 437 aa10.33□□□□□ -0.76
RFFL-212ENST00000584655 DOK6Q6PKX4 331 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms